RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ARL17AQ8IVW1 177 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 CAMK2N2Q96S95 79 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 PRO1854Q9UHT4 67 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 H3BUT2 72 aa4.01□□□□□ -1.77
SMNDC1-204ENST00000471297 NPC2P61916 151 aa4.01□□□□□ -1.77
SMNDC1-204ENST00000471297 C6orf223Q8N319 242 aa4.01□□□□□ -1.77
SMNDC1-204ENST00000471297 DAND5Q8N907 189 aa4.01□□□□□ -1.77
SMNDC1-204ENST00000471297 C15orf56Q8N910 161 aa4.01□□□□□ -1.77
SMNDC1-204ENST00000471297 NBDYA0A0U1RRE5 68 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 A0A1W2PPM0 123 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 K7ERJ3 54 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 FABP2P12104 132 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 VAMP3Q15836 100 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 HIGD2BQ4VC39 106 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 C14orf177Q52M58 125 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 LYRM7Q5U5X0 104 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 SOSTDC1Q6X4U4 206 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 GTF2H5Q6ZYL4 71 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 SND1-IT1Q9HBX3 110 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 C6orf48Q9UBA6 75 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 NBEAL1Q6ZS30 2694 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 TENM3Q9P273 2699 aa4□□□□□ -1.77
SMNDC1-204ENST00000471297 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 TRAV13-2A0A0B4J235 113 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 USP17L23D6RBM5 183 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 PSCAO43653 123 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 NDUFC2O95298 119 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 TSPAN13O95857 204 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 SYCNQ0VAF6 134 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 Q6ZRU5 148 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 LINC00526Q96FQ7 95 aa3.99□□□□□ -1.77
SMNDC1-204ENST00000471297 COX6CP09669 75 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 TLX1NBP0CAT3 122 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 SCGB1C2P0DMR2 95 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 Q1RN00 199 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 C9orf116Q5BN46 136 aaPredicted RBP3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 CARD19Q96LW7 228 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 KRTAP1-5Q9BYS1 174 aa3.98□□□□□ -1.77
SMNDC1-204ENST00000471297 TRBV20-1A0A075B6N2 111 aa3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 K7EP34 96 aa3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 RPL13AP40429 203 aaKnown RBP3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 PSMB2P49721 201 aa3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 CASC10Q5T4H9 136 aa3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 SPCS1Q9Y6A9 102 aa3.97□□□□□ -1.77
SMNDC1-204ENST00000471297 IGKV2-28A0A075B6P5 120 aa3.96□□□□□ -1.78
SMNDC1-204ENST00000471297 TRBV10-2A0A0K0K1G8 114 aa3.96□□□□□ -1.78
SMNDC1-204ENST00000471297 NDUFC2-KCTD14E9PQ53 114 aa3.96□□□□□ -1.78
SMNDC1-204ENST00000471297 H7C2G1 150 aa3.96□□□□□ -1.78
SMNDC1-204ENST00000471297 IGKV2D-28P01615 120 aa3.96□□□□□ -1.78
SMNDC1-204ENST00000471297 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 Q6ZR54 194 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 OR13C6PQ8NH95 151 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 TMEM126AQ9H061 195 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 CBY1Q9Y3M2 126 aa3.95□□□□□ -1.78
SMNDC1-204ENST00000471297 LRCOL1A6NCL2 159 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 M0R2N4 97 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 LECT2O14960 151 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 LY6G6CO95867 125 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 GAGE2EQ4V326 116 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 Q6ZRP5 223 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 LINC00337Q8N6G1 96 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 GAGE2DQ9UEU5 116 aa3.94□□□□□ -1.78
SMNDC1-204ENST00000471297 H0YGX0 51 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 M0R378 163 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 TCL1BO95988 128 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 ATXN8Q156A1 80 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 S100A7L2Q5SY68 101 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 C1orf134Q5TEV5 83 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 SMIM11BQ8TCY0 68 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 XAGE1AQ9HD64 81 aa3.93□□□□□ -1.78
SMNDC1-204ENST00000471297 F8W1H4 67 aa3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 H3BMG7 143 aa3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 NCR3O14931 201 aa3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 VPREB1P12018 145 aa3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 PRR3P79522 188 aaKnown RBP3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 GAGE2BQ13066 116 aa3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 WFDC2Q14508 124 aa3.92□□□□□ -1.78
SMNDC1-204ENST00000471297 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 A0A087WTM6 91 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 C16orf90A8MZG2 172 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 IGLV6-57P01721 117 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 C9orf129Q5T035 196 aaKnown RBP3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 Q8N814 137 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 C9orf163Q8N9P6 203 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 Q8NDZ9 215 aa3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 HUWE1Q7Z6Z7 4374 aaKnown RBP3.91□□□□□ -1.78
SMNDC1-204ENST00000471297 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 A0A1B0GX51 115 aa3.9□□□□□ -1.79
SMNDC1-204ENST00000471297 LST1O00453 97 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms