RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
CHD3-208ENST00000470531 UNQ6190/PRO20217Q6UXQ8 127 aa7.55□□□□□ -1.2
CHD3-208ENST00000470531 REG3AQ06141 175 aa7.54□□□□□ -1.2
CHD3-208ENST00000470531 KLK9Q2XQG4 91 aa7.54□□□□□ -1.2
CHD3-208ENST00000470531 H0YGX0 51 aa7.53□□□□□ -1.2
CHD3-208ENST00000470531 DEFB121Q5J5C9 76 aa7.53□□□□□ -1.2
CHD3-208ENST00000470531 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
CHD3-208ENST00000470531 PRO0255Q9UI72 69 aa7.53□□□□□ -1.2
CHD3-208ENST00000470531 Q6ZQY7 126 aa7.52□□□□□ -1.21
CHD3-208ENST00000470531 CAMK2N2Q96S95 79 aa7.52□□□□□ -1.21
CHD3-208ENST00000470531 ZNF843Q8N446 348 aa7.52□□□□□ -1.21
CHD3-208ENST00000470531 FHL2Q14192 279 aa7.51□□□□□ -1.21
CHD3-208ENST00000470531 LINC00474Q9P2X8 69 aa7.51□□□□□ -1.21
CHD3-208ENST00000470531 OVOL2Q9BRP0 275 aa7.51□□□□□ -1.21
CHD3-208ENST00000470531 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
CHD3-208ENST00000470531 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
CHD3-208ENST00000470531 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
CHD3-208ENST00000470531 F8WEM9 126 aa7.5□□□□□ -1.21
CHD3-208ENST00000470531 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
CHD3-208ENST00000470531 TRBV6-4A0A1B0GX49 114 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 C3orf84H3BNL1 204 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 UPK3BQ9BT76 320 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 IBA57-AS1B1ANH7 110 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 CR1P17927 2039 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
CHD3-208ENST00000470531 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
CHD3-208ENST00000470531 CMC4P56277 68 aaPredicted RBP7.48□□□□□ -1.21
CHD3-208ENST00000470531 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
CHD3-208ENST00000470531 Q8N9L7 120 aa7.47□□□□□ -1.21
CHD3-208ENST00000470531 A0A096LNI7 61 aa7.47□□□□□ -1.21
CHD3-208ENST00000470531 IGHV3OR16-9A0A0B4J2B5 98 aa7.46□□□□□ -1.21
CHD3-208ENST00000470531 CYSRT1A8MQ03 144 aa7.46□□□□□ -1.21
CHD3-208ENST00000470531 C10orf25Q5T742 122 aa7.46□□□□□ -1.22
CHD3-208ENST00000470531 VWFP04275 2813 aa7.46□□□□□ -1.22
CHD3-208ENST00000470531 TRBV7-6A0A0J9YX20 115 aa7.45□□□□□ -1.22
CHD3-208ENST00000470531 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
CHD3-208ENST00000470531 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
CHD3-208ENST00000470531 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
CHD3-208ENST00000470531 TMEM256-PLSCR3K7ERE1 68 aa7.45□□□□□ -1.22
CHD3-208ENST00000470531 PRR4Q16378 134 aa7.45□□□□□ -1.22
CHD3-208ENST00000470531 C22orf24Q9Y442 160 aa7.45□□□□□ -1.22
CHD3-208ENST00000470531 A0A087WZ39 114 aa7.44□□□□□ -1.22
CHD3-208ENST00000470531 SPART-AS1P0CW21 52 aa7.44□□□□□ -1.22
CHD3-208ENST00000470531 RMI2Q96E14 147 aa7.44□□□□□ -1.22
CHD3-208ENST00000470531 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
CHD3-208ENST00000470531 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
CHD3-208ENST00000470531 FBN1P35555 2871 aaKnown RBP7.43□□□□□ -1.22
CHD3-208ENST00000470531 LINC01600Q96MT4 127 aa7.43□□□□□ -1.22
CHD3-208ENST00000470531 APOC4P55056 127 aa7.42□□□□□ -1.22
CHD3-208ENST00000470531 CELA1Q9UNI1 258 aa7.42□□□□□ -1.22
CHD3-208ENST00000470531 TRBV10-3A0A0K0K1G6 114 aa7.42□□□□□ -1.22
CHD3-208ENST00000470531 IGLV1-51P01701 117 aa7.42□□□□□ -1.22
CHD3-208ENST00000470531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.42□□□□□ -1.22
CHD3-208ENST00000470531 IGKV2-24A0A0C4DH68 120 aa7.41□□□□□ -1.22
CHD3-208ENST00000470531 JMJD7-PLA2G4BH0Y9G9 81 aa7.41□□□□□ -1.22
CHD3-208ENST00000470531 DIRC1Q969H9 104 aa7.41□□□□□ -1.22
CHD3-208ENST00000470531 Q8N814 137 aa7.41□□□□□ -1.22
CHD3-208ENST00000470531 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
CHD3-208ENST00000470531 PSPHP1O15172 72 aa7.4□□□□□ -1.22
CHD3-208ENST00000470531 CD164L2Q6UWJ8 174 aa7.4□□□□□ -1.22
CHD3-208ENST00000470531 CD164Q04900 197 aa7.4□□□□□ -1.22
CHD3-208ENST00000470531 CCKP06307 115 aa7.4□□□□□ -1.23
CHD3-208ENST00000470531 GIG44P09565 113 aaPredicted RBP7.4□□□□□ -1.23
CHD3-208ENST00000470531 UBE2BP63146 152 aa7.4□□□□□ -1.23
CHD3-208ENST00000470531 Q6JHZ5 121 aa7.4□□□□□ -1.23
CHD3-208ENST00000470531 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
CHD3-208ENST00000470531 J3QKU1 62 aa7.39□□□□□ -1.23
CHD3-208ENST00000470531 NREPQ16612 68 aa7.39□□□□□ -1.23
CHD3-208ENST00000470531 COX7BP24311 80 aa7.38□□□□□ -1.23
CHD3-208ENST00000470531 LY6G6DO95868 133 aa7.37□□□□□ -1.23
CHD3-208ENST00000470531 WFDC10BQ8IUB3 73 aa7.37□□□□□ -1.23
CHD3-208ENST00000470531 DEFB116Q30KQ4 102 aa7.37□□□□□ -1.23
CHD3-208ENST00000470531 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
CHD3-208ENST00000470531 TENM1Q9UKZ4 2725 aa7.37□□□□□ -1.23
CHD3-208ENST00000470531 PSCAO43653 123 aa7.36□□□□□ -1.23
CHD3-208ENST00000470531 Q8IZM0 81 aa7.36□□□□□ -1.23
CHD3-208ENST00000470531 IGHV4-30-4P0DP06 118 aa7.35□□□□□ -1.23
CHD3-208ENST00000470531 M0R2N4 97 aa7.35□□□□□ -1.23
CHD3-208ENST00000470531 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
CHD3-208ENST00000470531 KPRPQ5T749 579 aaPredicted RBP7.35□□□□□ -1.23
CHD3-208ENST00000470531 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.34□□□□□ -1.23
CHD3-208ENST00000470531 FUSP35637 526 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHD3-208ENST00000470531 Q6ZTC4 211 aa7.34□□□□□ -1.23
CHD3-208ENST00000470531 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.23
CHD3-208ENST00000470531 A0A096LNT2 108 aa7.34□□□□□ -1.24
CHD3-208ENST00000470531 ETDCA0A1B0GVM5 59 aa7.33□□□□□ -1.24
CHD3-208ENST00000470531 PLAC8L1A1L4L8 177 aa7.33□□□□□ -1.24
CHD3-208ENST00000470531 HIGD2AQ9BW72 106 aa7.33□□□□□ -1.24
CHD3-208ENST00000470531 H3BS24 57 aa7.33□□□□□ -1.24
CHD3-208ENST00000470531 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
CHD3-208ENST00000470531 PKD1L1Q8TDX9 2849 aa7.32□□□□□ -1.24
CHD3-208ENST00000470531 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
CHD3-208ENST00000470531 A0A0J9YWU9 116 aa7.31□□□□□ -1.24
CHD3-208ENST00000470531 MIFP14174 115 aa7.31□□□□□ -1.24
CHD3-208ENST00000470531 BPY2O14599 106 aa7.31□□□□□ -1.24
CHD3-208ENST00000470531 TRAV10A0A0B4J240 114 aa7.3□□□□□ -1.24
CHD3-208ENST00000470531 X6R8D5 127 aa7.3□□□□□ -1.24
CHD3-208ENST00000470531 H7BZZ5 65 aa7.3□□□□□ -1.24
CHD3-208ENST00000470531 Q6ZVQ6 151 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms