RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 C9orf163Q8N9P6 203 aa9.79□□□□□ -0.84
COL4A5-203ENST00000470339 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-203ENST00000470339 DNAH2Q9P225 4427 aa9.78□□□□□ -0.84
COL4A5-203ENST00000470339 RYR2Q92736 4967 aa9.77□□□□□ -0.84
COL4A5-203ENST00000470339 RAB37Q96AX2 223 aa9.77□□□□□ -0.85
COL4A5-203ENST00000470339 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.85
COL4A5-203ENST00000470339 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
COL4A5-203ENST00000470339 TNP2Q05952 138 aa9.75□□□□□ -0.85
COL4A5-203ENST00000470339 GAGE2EQ4V326 116 aa9.75□□□□□ -0.85
COL4A5-203ENST00000470339 XAGE1AQ9HD64 81 aa9.75□□□□□ -0.85
COL4A5-203ENST00000470339 GAGE2DQ9UEU5 116 aa9.75□□□□□ -0.85
COL4A5-203ENST00000470339 PLA2G2DQ9UNK4 145 aa9.75□□□□□ -0.85
COL4A5-203ENST00000470339 FRAS1Q86XX4 4008 aa9.75□□□□□ -0.85
COL4A5-203ENST00000470339 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
COL4A5-203ENST00000470339 K7ERJ3 54 aa9.74□□□□□ -0.85
COL4A5-203ENST00000470339 TAX1BP3O14907 124 aa9.74□□□□□ -0.85
COL4A5-203ENST00000470339 DNAH17Q9UFH2 4485 aa9.73□□□□□ -0.85
COL4A5-203ENST00000470339 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
COL4A5-203ENST00000470339 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
COL4A5-203ENST00000470339 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
COL4A5-203ENST00000470339 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
COL4A5-203ENST00000470339 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
COL4A5-203ENST00000470339 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
COL4A5-203ENST00000470339 SDIM1Q6ZPB5 146 aa9.72□□□□□ -0.85
COL4A5-203ENST00000470339 C9orf118A6NHY6 69 aa9.71□□□□□ -0.86
COL4A5-203ENST00000470339 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
COL4A5-203ENST00000470339 HYDINQ4G0P3 5121 aa9.7□□□□□ -0.86
COL4A5-203ENST00000470339 VPREB1P12018 145 aa9.7□□□□□ -0.86
COL4A5-203ENST00000470339 Q8NDZ9 215 aa9.7□□□□□ -0.86
COL4A5-203ENST00000470339 LINC00474Q9P2X8 69 aa9.7□□□□□ -0.86
COL4A5-203ENST00000470339 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
COL4A5-203ENST00000470339 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
COL4A5-203ENST00000470339 A0A096LNI7 61 aa9.69□□□□□ -0.86
COL4A5-203ENST00000470339 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
COL4A5-203ENST00000470339 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
COL4A5-203ENST00000470339 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
COL4A5-203ENST00000470339 M0R378 163 aa9.68□□□□□ -0.86
COL4A5-203ENST00000470339 TSPAN13O95857 204 aa9.68□□□□□ -0.86
COL4A5-203ENST00000470339 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
COL4A5-203ENST00000470339 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
COL4A5-203ENST00000470339 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
COL4A5-203ENST00000470339 H3BUT2 72 aa9.65□□□□□ -0.86
COL4A5-203ENST00000470339 NCR3O14931 201 aa9.65□□□□□ -0.86
COL4A5-203ENST00000470339 S100A7L2Q5SY68 101 aa9.65□□□□□ -0.86
COL4A5-203ENST00000470339 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
COL4A5-203ENST00000470339 OR13C6PQ8NH95 151 aa9.65□□□□□ -0.86
COL4A5-203ENST00000470339 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
COL4A5-203ENST00000470339 IGKV2-24A0A0C4DH68 120 aa9.64□□□□□ -0.87
COL4A5-203ENST00000470339 H7C2G1 150 aa9.64□□□□□ -0.87
COL4A5-203ENST00000470339 IGLV6-57P01721 117 aa9.64□□□□□ -0.87
COL4A5-203ENST00000470339 Q1RN00 199 aa9.64□□□□□ -0.87
COL4A5-203ENST00000470339 SERTAD4-AS1Q5TG53 156 aa9.64□□□□□ -0.87
COL4A5-203ENST00000470339 RPL28P46779 137 aaKnown RBP9.63□□□□□ -0.87
COL4A5-203ENST00000470339 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
COL4A5-203ENST00000470339 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
COL4A5-203ENST00000470339 FAM168BA1KXE4 195 aa9.62□□□□□ -0.87
COL4A5-203ENST00000470339 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
COL4A5-203ENST00000470339 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 FABP2P12104 132 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 PSMB2P49721 201 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
COL4A5-203ENST00000470339 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
COL4A5-203ENST00000470339 COX6CP09669 75 aa9.6□□□□□ -0.87
COL4A5-203ENST00000470339 CHTF8P0CG12 524 aa9.6□□□□□ -0.87
COL4A5-203ENST00000470339 NAA38Q9BRA0 125 aaKnown RBP9.6□□□□□ -0.87
COL4A5-203ENST00000470339 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
COL4A5-203ENST00000470339 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
COL4A5-203ENST00000470339 FAT2Q9NYQ8 4349 aa9.6□□□□□ -0.87
COL4A5-203ENST00000470339 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
COL4A5-203ENST00000470339 TRIAP1O43715 76 aa9.59□□□□□ -0.87
COL4A5-203ENST00000470339 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL4A5-203ENST00000470339 FAM19A5Q7Z5A7 132 aaPredicted RBP9.59□□□□□ -0.87
COL4A5-203ENST00000470339 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
COL4A5-203ENST00000470339 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
COL4A5-203ENST00000470339 DNAH11Q96DT5 4516 aa9.59□□□□□ -0.87
COL4A5-203ENST00000470339 PKD1P98161 4303 aa9.59□□□□□ -0.87
COL4A5-203ENST00000470339 A0A1B0GV90 55 aa9.57□□□□□ -0.88
COL4A5-203ENST00000470339 SCGB1C2P0DMR2 95 aa9.57□□□□□ -0.88
COL4A5-203ENST00000470339 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
COL4A5-203ENST00000470339 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
COL4A5-203ENST00000470339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-203ENST00000470339 IGLV1-50A0A075B6I6 118 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 TRAV23DV6A0A075B6W5 121 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 H0YGX0 51 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 PANO1I0J062 215 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 M0QXV9 152 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 VAMP3Q15836 100 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 KCNQ1DNQ9H478 68 aa9.56□□□□□ -0.88
COL4A5-203ENST00000470339 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
COL4A5-203ENST00000470339 TRBV7-6A0A0J9YX20 115 aa9.54□□□□□ -0.88
COL4A5-203ENST00000470339 A0A1B0GVY2 172 aa9.54□□□□□ -0.88
COL4A5-203ENST00000470339 GAGE10A6NGK3 116 aa9.54□□□□□ -0.88
COL4A5-203ENST00000470339 PRYO14603 147 aa9.54□□□□□ -0.88
COL4A5-203ENST00000470339 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
COL4A5-203ENST00000470339 A0A087WYN8 130 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms