RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 Q8NDZ9 215 aa11.88□□□□□ -0.51
SMC4-211ENST00000469858 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
SMC4-211ENST00000469858 NDUFC2-KCTD14E9PQ53 114 aa11.88□□□□□ -0.51
SMC4-211ENST00000469858 SLPIP03973 132 aa11.88□□□□□ -0.51
SMC4-211ENST00000469858 OR13C6PQ8NH95 151 aa11.88□□□□□ -0.51
SMC4-211ENST00000469858 COX6CP09669 75 aa11.87□□□□□ -0.51
SMC4-211ENST00000469858 WFDC2Q14508 124 aa11.87□□□□□ -0.51
SMC4-211ENST00000469858 NCR3O14931 201 aa11.86□□□□□ -0.51
SMC4-211ENST00000469858 GAGE2EQ4V326 116 aa11.85□□□□□ -0.51
SMC4-211ENST00000469858 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
SMC4-211ENST00000469858 GAGE2DQ9UEU5 116 aa11.85□□□□□ -0.51
SMC4-211ENST00000469858 Q6ZRP5 223 aa11.85□□□□□ -0.51
SMC4-211ENST00000469858 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
SMC4-211ENST00000469858 M0R2N4 97 aa11.84□□□□□ -0.51
SMC4-211ENST00000469858 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
SMC4-211ENST00000469858 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
SMC4-211ENST00000469858 CLEC2BQ92478 149 aa11.83□□□□□ -0.52
SMC4-211ENST00000469858 TGP01266 2768 aa11.83□□□□□ -0.52
SMC4-211ENST00000469858 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
SMC4-211ENST00000469858 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
SMC4-211ENST00000469858 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
SMC4-211ENST00000469858 RPL18AQ02543 176 aaKnown RBP11.81□□□□□ -0.52
SMC4-211ENST00000469858 ATXN8Q156A1 80 aa11.81□□□□□ -0.52
SMC4-211ENST00000469858 F8W1H4 67 aa11.79□□□□□ -0.52
SMC4-211ENST00000469858 TMEM126AQ9H061 195 aa11.79□□□□□ -0.52
SMC4-211ENST00000469858 S100A7L2Q5SY68 101 aa11.79□□□□□ -0.52
SMC4-211ENST00000469858 PRO0461Q9UI25 63 aa11.79□□□□□ -0.52
SMC4-211ENST00000469858 TLX1NBP0CAT3 122 aa11.78□□□□□ -0.52
SMC4-211ENST00000469858 Q6ZRN7 208 aaPredicted RBP11.78□□□□□ -0.52
SMC4-211ENST00000469858 LST1O00453 97 aa11.77□□□□□ -0.53
SMC4-211ENST00000469858 C9orf129Q5T035 196 aaKnown RBP11.77□□□□□ -0.53
SMC4-211ENST00000469858 TRBV10-2A0A0K0K1G8 114 aa11.76□□□□□ -0.53
SMC4-211ENST00000469858 VPREB1P12018 145 aa11.76□□□□□ -0.53
SMC4-211ENST00000469858 C14orf177Q52M58 125 aa11.76□□□□□ -0.53
SMC4-211ENST00000469858 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
SMC4-211ENST00000469858 C9JAW5 83 aa11.76□□□□□ -0.53
SMC4-211ENST00000469858 LINC01620Q4KN68 170 aa11.76□□□□□ -0.53
SMC4-211ENST00000469858 LY6G6CO95867 125 aa11.75□□□□□ -0.53
SMC4-211ENST00000469858 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
SMC4-211ENST00000469858 SMCPP49901 116 aaPredicted RBP11.74□□□□□ -0.53
SMC4-211ENST00000469858 CNBPP62633 177 aaKnown RBP11.74□□□□□ -0.53
SMC4-211ENST00000469858 GAGE2BQ13066 116 aa11.74□□□□□ -0.53
SMC4-211ENST00000469858 LOC107984640A0A0U1RRK4 108 aa11.73□□□□□ -0.53
SMC4-211ENST00000469858 Q6ZR54 194 aa11.73□□□□□ -0.53
SMC4-211ENST00000469858 FAM218AQ96MZ4 157 aa11.73□□□□□ -0.53
SMC4-211ENST00000469858 IGLV6-57P01721 117 aa11.72□□□□□ -0.53
SMC4-211ENST00000469858 TRBV10-3A0A0K0K1G6 114 aa11.72□□□□□ -0.53
SMC4-211ENST00000469858 SLC25A20O43772 301 aa11.72□□□□□ -0.53
SMC4-211ENST00000469858 SERTAD4-AS1Q5TG53 156 aa11.7□□□□□ -0.54
SMC4-211ENST00000469858 H0YGX0 51 aa11.7□□□□□ -0.54
SMC4-211ENST00000469858 M0R378 163 aa11.7□□□□□ -0.54
SMC4-211ENST00000469858 ETDBQ3ZM63 59 aa11.7□□□□□ -0.54
SMC4-211ENST00000469858 LINC00476Q8WZB0 136 aa11.7□□□□□ -0.54
SMC4-211ENST00000469858 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
SMC4-211ENST00000469858 C6orf99Q4VX62 202 aa11.69□□□□□ -0.54
SMC4-211ENST00000469858 NKAPP1Q8N9T2 125 aa11.68□□□□□ -0.54
SMC4-211ENST00000469858 A0A087WYN8 130 aa11.68□□□□□ -0.54
SMC4-211ENST00000469858 FAM168BA1KXE4 195 aa11.68□□□□□ -0.54
SMC4-211ENST00000469858 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
SMC4-211ENST00000469858 TRAV23DV6A0A075B6W5 121 aa11.67□□□□□ -0.54
SMC4-211ENST00000469858 TRACP01848 142 aa11.67□□□□□ -0.54
SMC4-211ENST00000469858 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
SMC4-211ENST00000469858 PLA2G2DQ9UNK4 145 aa11.66□□□□□ -0.54
SMC4-211ENST00000469858 Q8N814 137 aa11.65□□□□□ -0.54
SMC4-211ENST00000469858 A0A096LNI7 61 aa11.65□□□□□ -0.55
SMC4-211ENST00000469858 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
SMC4-211ENST00000469858 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
SMC4-211ENST00000469858 A0A087WTM6 91 aa11.63□□□□□ -0.55
SMC4-211ENST00000469858 C16orf90A8MZG2 172 aa11.63□□□□□ -0.55
SMC4-211ENST00000469858 C1orf134Q5TEV5 83 aa11.63□□□□□ -0.55
SMC4-211ENST00000469858 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
SMC4-211ENST00000469858 DNAL4O96015 105 aa11.63□□□□□ -0.55
SMC4-211ENST00000469858 C7orf33Q8WU49 177 aa11.63□□□□□ -0.55
SMC4-211ENST00000469858 H3BT86 120 aa11.62□□□□□ -0.55
SMC4-211ENST00000469858 KRTAP7-1Q8IUC3 87 aa11.62□□□□□ -0.55
SMC4-211ENST00000469858 C9orf163Q8N9P6 203 aa11.62□□□□□ -0.55
SMC4-211ENST00000469858 DIRC1Q969H9 104 aa11.62□□□□□ -0.55
SMC4-211ENST00000469858 M0QXV9 152 aa11.61□□□□□ -0.55
SMC4-211ENST00000469858 ZNF73O43830 326 aaPredicted RBP11.61□□□□□ -0.55
SMC4-211ENST00000469858 TEN1Q86WV5 123 aa11.61□□□□□ -0.55
SMC4-211ENST00000469858 IGLV5-37A0A075B6J1 123 aa11.61□□□□□ -0.55
SMC4-211ENST00000469858 LINC01600Q96MT4 127 aa11.59□□□□□ -0.55
SMC4-211ENST00000469858 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
SMC4-211ENST00000469858 C22orf24Q9Y442 160 aa11.59□□□□□ -0.55
SMC4-211ENST00000469858 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.55
SMC4-211ENST00000469858 CHTF8P0CG12 524 aa11.58□□□□□ -0.56
SMC4-211ENST00000469858 DNAH6Q9C0G6 4158 aa11.57□□□□□ -0.56
SMC4-211ENST00000469858 RPL37AP8A6NKH3 93 aa11.57□□□□□ -0.56
SMC4-211ENST00000469858 BAALC-AS2P0C853 105 aa11.57□□□□□ -0.56
SMC4-211ENST00000469858 DNAH2Q9P225 4427 aa11.56□□□□□ -0.56
SMC4-211ENST00000469858 K7ERU9 68 aa11.56□□□□□ -0.56
SMC4-211ENST00000469858 LINC00575Q6W349 94 aa11.56□□□□□ -0.56
SMC4-211ENST00000469858 MRPL55Q7Z7F7 128 aaKnown RBP11.56□□□□□ -0.56
SMC4-211ENST00000469858 LINC00167Q96N53 147 aa11.56□□□□□ -0.56
SMC4-211ENST00000469858 A0A1B0GX51 115 aa11.56□□□□□ -0.56
SMC4-211ENST00000469858 PKIGQ9Y2B9 76 aa11.56□□□□□ -0.56
SMC4-211ENST00000469858 COX7BP24311 80 aa11.55□□□□□ -0.56
SMC4-211ENST00000469858 FUSP35637 526 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMC4-211ENST00000469858 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
SMC4-211ENST00000469858 KCNQ1DNQ9H478 68 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms