RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 C9orf153Q5TBE3 101 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 ATP5EP2Q5VTU8 51 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 CEMP1Q6PRD7 247 aaPredicted RBP2.4□□□□□ -2.03
SORT1-202ENST00000466471 LINC00336Q6ZUF6 198 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 RNF182Q8N6D2 247 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 LINC00167Q96N53 147 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 OPRPNQ99935 248 aaPredicted RBP2.4□□□□□ -2.03
SORT1-202ENST00000466471 HEATR1Q9H583 2144 aaKnown RBP2.4□□□□□ -2.03
SORT1-202ENST00000466471 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 DNAH17Q9UFH2 4485 aa2.4□□□□□ -2.03
SORT1-202ENST00000466471 DSCAML1Q8TD84 2053 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 IGHV3OR16-13A0A075B7E8 117 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 H0YGX0 51 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 GNRH2O43555 120 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 IGHG2P01859 326 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 APELAP0DMC3 54 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 RPL39P62891 51 aaKnown RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 EGFEM1PQ0D2K5 195 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 DAZ2Q13117 558 aaKnown RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 Q5XG85 94 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 DAZ4Q86SG3 579 aaKnown RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 LINC00308Q8TCZ7 52 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 ZNF625Q96I27 306 aaPredicted RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 DAZ1Q9NQZ3 744 aaKnown RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 DAZ3Q9NR90 486 aaKnown RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 UBE2D4Q9Y2X8 147 aa2.39□□□□□ -2.03
SORT1-202ENST00000466471 KLK5Q9Y337 293 aaPredicted RBP2.39□□□□□ -2.03
SORT1-202ENST00000466471 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 LRP1BQ9NZR2 4599 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 TRAV13-2A0A0B4J235 113 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 A0A0J9YXV3 536 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 LOC107984640A0A0U1RRK4 108 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 RPL37AP8A6NKH3 93 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 J3QLI3 93 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 BAALC-AS2P0C853 105 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 COX7A1P24310 79 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 CIRBPQ14011 172 aaKnown RBP2.38□□□□□ -2.03
SORT1-202ENST00000466471 SFTA2Q6UW10 78 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 C5orf56Q8N8D9 126 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 NKAPP1Q8N9T2 125 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 KIR2DL5BQ8NHK3 375 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 LINC01006Q8NI28 216 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 CHCHD7Q9BUK0 85 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 LINC00527Q9UJ94 153 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 LRP2P98164 4655 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 AGRNO00468 2067 aa2.38□□□□□ -2.03
SORT1-202ENST00000466471 IGKV2D-30A0A075B6S6 120 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 Q1RN00 199 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 S100A7L2Q5SY68 101 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 CLEC19AQ6UXS0 136 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 C18orf65Q6ZTR6 163 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 Q8N2B8 174 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
SORT1-202ENST00000466471 TRAV12-2A0A075B6T6 113 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 IGHV3-35A0A0C4DH35 117 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 hADV29S1A0JD25 119 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 F5H768 121 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 H3BQ85 93 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 OXTP01178 125 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 IGHV3-23P01764 117 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 IGHV3-53P01767 116 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 CCKP06307 115 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 MGPP08493 103 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 RBMY1CP0DJD4 496 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 EMP1P54849 157 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 KLKP1Q107X0 134 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 UNQ9165/PRO28630Q6UXU0 137 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 SOSTDC1Q6X4U4 206 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 CLEC2BQ92478 149 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 RETNQ9HD89 108 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 S4R3C0 116 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 V9GYY9 64 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 FAT1Q14517 4588 aa2.36□□□□□ -2.03
SORT1-202ENST00000466471 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 IGLV8-61A0A075B6I0 122 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 TRAV13-1A0A0B4J241 112 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 TRBV10-1A0A0K0K1A3 114 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 JMJD7-PLA2G4BH0Y9G9 81 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 NDUFC1O43677 76 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 ERC2-IT1O76042 136 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 CD28P10747 220 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
SORT1-202ENST00000466471 C6orf223Q8N319 242 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 Q8N377 158 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 WFDC9Q8NEX5 89 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 RHPN1-AS1Q9BWJ2 59 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 LINC00846Q9NV44 126 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 MOB4Q9Y3A3 225 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 SERP1Q9Y6X1 66 aa2.35□□□□□ -2.03
SORT1-202ENST00000466471 IGKV2-28A0A075B6P5 120 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 SMIM26A0A096LP01 95 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms