RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 Q8NDZ9 215 aa11.65□□□□□ -0.54
LMO2-204ENST00000464025 C1orf43Q9BWL3 253 aa11.65□□□□□ -0.54
LMO2-204ENST00000464025 Q9HAA7 133 aa11.65□□□□□ -0.54
LMO2-204ENST00000464025 TENM3Q9P273 2699 aa11.65□□□□□ -0.54
LMO2-204ENST00000464025 INAFM2P0DMQ5 153 aa11.64□□□□□ -0.55
LMO2-204ENST00000464025 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
LMO2-204ENST00000464025 LECT2O14960 151 aa11.63□□□□□ -0.55
LMO2-204ENST00000464025 HUWE1Q7Z6Z7 4374 aaKnown RBP11.63□□□□□ -0.55
LMO2-204ENST00000464025 BAHCC1Q9P281 2608 aa11.63□□□□□ -0.55
LMO2-204ENST00000464025 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
LMO2-204ENST00000464025 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
LMO2-204ENST00000464025 COL6A5A8TX70 2615 aa11.61□□□□□ -0.55
LMO2-204ENST00000464025 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
LMO2-204ENST00000464025 OBSCN-AS1Q96MR7 158 aa11.61□□□□□ -0.55
LMO2-204ENST00000464025 NCR3O14931 201 aa11.6□□□□□ -0.55
LMO2-204ENST00000464025 PRB2P02812 416 aaPredicted RBP11.6□□□□□ -0.55
LMO2-204ENST00000464025 Q8N814 137 aa11.59□□□□□ -0.55
LMO2-204ENST00000464025 ORMDL1Q9P0S3 153 aa11.59□□□□□ -0.55
LMO2-204ENST00000464025 HIGD2BQ4VC39 106 aa11.58□□□□□ -0.55
LMO2-204ENST00000464025 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.55
LMO2-204ENST00000464025 IGKV2D-24A0A075B6R9 120 aa11.58□□□□□ -0.56
LMO2-204ENST00000464025 SNCGO76070 127 aa11.58□□□□□ -0.56
LMO2-204ENST00000464025 Q6ZRU5 148 aa11.58□□□□□ -0.56
LMO2-204ENST00000464025 NDUFC2-KCTD14E9PQ53 114 aa11.57□□□□□ -0.56
LMO2-204ENST00000464025 C6orf99Q4VX62 202 aa11.57□□□□□ -0.56
LMO2-204ENST00000464025 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
LMO2-204ENST00000464025 Q6Q795 121 aa11.56□□□□□ -0.56
LMO2-204ENST00000464025 NOTCH1P46531 2555 aa11.55□□□□□ -0.56
LMO2-204ENST00000464025 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
LMO2-204ENST00000464025 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
LMO2-204ENST00000464025 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
LMO2-204ENST00000464025 LINC00575Q6W349 94 aa11.54□□□□□ -0.56
LMO2-204ENST00000464025 VPREB1P12018 145 aa11.54□□□□□ -0.56
LMO2-204ENST00000464025 XAGE1AQ9HD64 81 aa11.54□□□□□ -0.56
LMO2-204ENST00000464025 TMEM256-PLSCR3K7ERE1 68 aa11.53□□□□□ -0.56
LMO2-204ENST00000464025 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.57
LMO2-204ENST00000464025 SYCNQ0VAF6 134 aa11.52□□□□□ -0.57
LMO2-204ENST00000464025 RMI2Q96E14 147 aa11.52□□□□□ -0.57
LMO2-204ENST00000464025 SLPIP03973 132 aa11.51□□□□□ -0.57
LMO2-204ENST00000464025 TRBV10-3A0A0K0K1G6 114 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 JMJD7-PLA2G4BH0Y9G9 81 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 H3BQ85 93 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 M0R378 163 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 C9orf129Q5T035 196 aaKnown RBP11.5□□□□□ -0.57
LMO2-204ENST00000464025 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
LMO2-204ENST00000464025 DNAH1Q9P2D7 4330 aa11.49□□□□□ -0.57
LMO2-204ENST00000464025 hADV29S1A0JD25 119 aa11.48□□□□□ -0.57
LMO2-204ENST00000464025 DIRC1Q969H9 104 aa11.48□□□□□ -0.57
LMO2-204ENST00000464025 TRBV7-7A0A0K0K1E9 115 aa11.47□□□□□ -0.57
LMO2-204ENST00000464025 Q6ZRP5 223 aa11.47□□□□□ -0.57
LMO2-204ENST00000464025 LINC00643Q86TS7 51 aa11.47□□□□□ -0.57
LMO2-204ENST00000464025 NBEAL1Q6ZS30 2694 aa11.47□□□□□ -0.57
LMO2-204ENST00000464025 A0A1B0GV72 72 aa11.46□□□□□ -0.57
LMO2-204ENST00000464025 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
LMO2-204ENST00000464025 IMUPQ9GZP8 106 aa11.45□□□□□ -0.58
LMO2-204ENST00000464025 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
LMO2-204ENST00000464025 ZNF73O43830 326 aaPredicted RBP11.45□□□□□ -0.58
LMO2-204ENST00000464025 GAGE2AQ6NT46 116 aa11.45□□□□□ -0.58
LMO2-204ENST00000464025 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
LMO2-204ENST00000464025 DNAH9Q9NYC9 4486 aa11.43□□□□□ -0.58
LMO2-204ENST00000464025 ELOF1P60002 83 aaKnown RBP11.43□□□□□ -0.58
LMO2-204ENST00000464025 SMCR5Q8TEV8 140 aa11.43□□□□□ -0.58
LMO2-204ENST00000464025 MDFIQ99750 246 aa11.43□□□□□ -0.58
LMO2-204ENST00000464025 USP17L23D6RBM5 183 aa11.42□□□□□ -0.58
LMO2-204ENST00000464025 COX7BP24311 80 aa11.42□□□□□ -0.58
LMO2-204ENST00000464025 B9D2Q9BPU9 175 aa11.42□□□□□ -0.58
LMO2-204ENST00000464025 GHRHP01286 108 aa11.41□□□□□ -0.58
LMO2-204ENST00000464025 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.41□□□□□ -0.58
LMO2-204ENST00000464025 CCKP06307 115 aa11.41□□□□□ -0.58
LMO2-204ENST00000464025 MGAM2Q2M2H8 2515 aa11.4□□□□□ -0.58
LMO2-204ENST00000464025 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
LMO2-204ENST00000464025 CASC10Q5T4H9 136 aa11.38□□□□□ -0.59
LMO2-204ENST00000464025 KCNQ1DNQ9H478 68 aa11.37□□□□□ -0.59
LMO2-204ENST00000464025 APLNQ9ULZ1 77 aa11.37□□□□□ -0.59
LMO2-204ENST00000464025 DYNC2H1Q8NCM8 4307 aaKnown RBP11.36□□□□□ -0.59
LMO2-204ENST00000464025 Q6ZQY7 126 aa11.36□□□□□ -0.59
LMO2-204ENST00000464025 LINC00528Q8N1L1 170 aa11.36□□□□□ -0.59
LMO2-204ENST00000464025 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
LMO2-204ENST00000464025 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
LMO2-204ENST00000464025 NKAPP1Q8N9T2 125 aa11.34□□□□□ -0.59
LMO2-204ENST00000464025 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
LMO2-204ENST00000464025 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
LMO2-204ENST00000464025 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
LMO2-204ENST00000464025 ANAPC13Q9BS18 74 aa11.33□□□□□ -0.6
LMO2-204ENST00000464025 PDE6GP18545 87 aa11.33□□□□□ -0.6
LMO2-204ENST00000464025 C7orf33Q8WU49 177 aa11.33□□□□□ -0.6
LMO2-204ENST00000464025 NHLRC4P0CG21 123 aaPredicted RBP11.32□□□□□ -0.6
LMO2-204ENST00000464025 Q6JHZ5 121 aa11.32□□□□□ -0.6
LMO2-204ENST00000464025 LOC107984640A0A0U1RRK4 108 aa11.31□□□□□ -0.6
LMO2-204ENST00000464025 Q6ZQT0 140 aa11.3□□□□□ -0.6
LMO2-204ENST00000464025 KRTAP1-5Q9BYS1 174 aa11.29□□□□□ -0.6
LMO2-204ENST00000464025 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
LMO2-204ENST00000464025 PRYO14603 147 aa11.28□□□□□ -0.6
LMO2-204ENST00000464025 CNBPP62633 177 aaKnown RBP11.28□□□□□ -0.6
LMO2-204ENST00000464025 IGLV1-50A0A075B6I6 118 aa11.27□□□□□ -0.61
LMO2-204ENST00000464025 SPRR1AP35321 89 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms