RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 SSBP3-AS1Q7Z2R9 100 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 SCGB1C1Q8TD33 95 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 FMC1Q96HJ9 113 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 FAM210AQ96ND0 272 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 SPRR2FQ96RM1 72 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 VCX3AQ9NNX9 186 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 TMEM167BQ9NRX6 74 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 ZFP30Q9Y2G7 519 aa1.22□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 A8MWP4 228 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 RGS5O15539 181 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 IFNA1P01562 189 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CXCL1P09341 107 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 ARL14EPLP0DKL9 152 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 HBBP68871 147 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 C6orf226Q5I0X4 101 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 STOML3Q8TAV4 291 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 SMIM4Q8WVI0 70 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 HIST1H2BAQ96A08 127 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 PLEKHB2Q96CS7 222 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TMEM126AQ9H061 195 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CDC42SE2Q9NRR3 84 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TOMM7Q9P0U1 55 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 EPDR1Q9UM22 224 aa1.21□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 ETDCA0A1B0GVM5 59 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 SDHAF1A6NFY7 115 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 UPK1BO75841 260 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 AKR1C3P42330 323 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CDC34P49427 236 aaPredicted RBP1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 UQCC3Q6UW78 93 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 MRPL52Q86TS9 123 aaKnown RBP1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 C2orf88Q9BSF0 95 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 EIF5A2Q9GZV4 153 aaKnown RBP1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 VCX3BQ9H321 246 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 ST20Q9HBF5 79 aa1.2□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 BORCS7-ASMTA0A0B4J1R7 106 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TMEM238C9JI98 176 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 F2Z2F3 143 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 F8VRH5 84 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 HMGB3O15347 200 aaKnown RBP1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CXorf1O96002 111 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 NEDD8Q15843 81 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 C10orf91Q5T1B1 145 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 C2orf82Q6UX34 121 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 HRCT1Q6UXD1 115 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 BORCS7Q96B45 105 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CNBD2Q96M20 576 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TCEAL7Q9BRU2 100 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TIMM21Q9BVV7 248 aa1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 WDR61Q9GZS3 305 aaKnown RBP1.19□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 A0A1W2PRE2 83 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 ANKRD20A5PA0PJZ0 165 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 IGSF23A1L1A6 192 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 C9orf170A2RU37 121 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TCAPO15273 167 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 PFDN1O60925 122 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 NOL3O60936 208 aaKnown RBP1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 PPP1R17O96001 155 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 MBP02144 154 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 S100A9P06702 114 aaKnown RBP1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 PET100P0DJ07 73 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 GCHFRP30047 84 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 LSM3P62310 102 aaKnown RBP1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 Q6ZUT4 128 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TOMM5Q8N4H5 51 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 Q9H521 79 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 SPANXA1Q9NS26 97 aa1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CSDC2Q9Y534 153 aaKnown RBP1.18□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 IGHV3OR16-9A0A0B4J2B5 98 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CENPXA8MT69 81 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 M0R378 163 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TCL1BO95988 128 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 LTAP01374 205 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 AQP4P55087 323 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 DEFA1P59665 94 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 RAB5BP61020 215 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 Q5VV11 94 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 Q8IZM0 81 aa1.17□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 H7C2G1 150 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 PPP1R2P9O14990 202 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 NDUFB6O95139 128 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 STAG3L2P0CL84 134 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 STAG3L3P0CL85 134 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 IFI27P40305 119 aaPredicted RBP1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 CRIP1P50238 77 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 SEC11AP67812 179 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 JOSD1Q15040 202 aaPredicted RBP1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 BAGE2Q86Y30 109 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 GATD1Q8NB37 220 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 SMCR5Q8TEV8 140 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 ACTR3CQ9C0K3 210 aaPredicted RBP1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TMEM191AQ9H0A3 160 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 BIN3Q9NQY0 253 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 R4GN34 69 aa1.16□□□□□ -2.22
PCDH9-AS4-201ENST00000456459 TRAV9-1A0A075B6T8 112 aa1.15□□□□□ -2.23
PCDH9-AS4-201ENST00000456459 TRBV27A0A0K0K1C4 114 aa1.15□□□□□ -2.23
PCDH9-AS4-201ENST00000456459 FAM236AA0A1B0GUQ0 79 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms