RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
PDGFB-204ENST00000455790 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
PDGFB-204ENST00000455790 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
PDGFB-204ENST00000455790 CBLN2Q8IUK8 224 aa6.97□□□□□ -1.29
PDGFB-204ENST00000455790 IFI27L1Q96BM0 104 aa6.97□□□□□ -1.29
PDGFB-204ENST00000455790 CHCHD1Q96BP2 118 aaKnown RBP6.97□□□□□ -1.29
PDGFB-204ENST00000455790 MUC2Q02817 5179 aa6.96□□□□□ -1.29
PDGFB-204ENST00000455790 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
PDGFB-204ENST00000455790 LINC00158P58513 81 aa6.96□□□□□ -1.3
PDGFB-204ENST00000455790 RPL24P83731 157 aaKnown RBP6.96□□□□□ -1.3
PDGFB-204ENST00000455790 SFTA2Q6UW10 78 aa6.96□□□□□ -1.3
PDGFB-204ENST00000455790 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
PDGFB-204ENST00000455790 FAM19A2Q8N3H0 131 aa6.95□□□□□ -1.3
PDGFB-204ENST00000455790 SMIM13P0DJ93 91 aa6.94□□□□□ -1.3
PDGFB-204ENST00000455790 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
PDGFB-204ENST00000455790 LINC00310P59036 64 aa6.93□□□□□ -1.3
PDGFB-204ENST00000455790 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
PDGFB-204ENST00000455790 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
PDGFB-204ENST00000455790 H0Y8G0 127 aa6.92□□□□□ -1.3
PDGFB-204ENST00000455790 HSBP1O75506 76 aa6.92□□□□□ -1.3
PDGFB-204ENST00000455790 TSPEAR-AS2P59090 65 aa6.92□□□□□ -1.3
PDGFB-204ENST00000455790 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
PDGFB-204ENST00000455790 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
PDGFB-204ENST00000455790 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
PDGFB-204ENST00000455790 NCR3O14931 201 aa6.91□□□□□ -1.3
PDGFB-204ENST00000455790 TRGC2P03986 189 aa6.91□□□□□ -1.3
PDGFB-204ENST00000455790 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
PDGFB-204ENST00000455790 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
PDGFB-204ENST00000455790 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
PDGFB-204ENST00000455790 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
PDGFB-204ENST00000455790 SERF1AO75920 110 aa6.89□□□□□ -1.31
PDGFB-204ENST00000455790 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
PDGFB-204ENST00000455790 PRYO14603 147 aa6.88□□□□□ -1.31
PDGFB-204ENST00000455790 HERV-K104P63124 156 aa6.88□□□□□ -1.31
PDGFB-204ENST00000455790 TRBV10-3A0A0K0K1G6 114 aa6.87□□□□□ -1.31
PDGFB-204ENST00000455790 ATP6V1G1O75348 118 aa6.87□□□□□ -1.31
PDGFB-204ENST00000455790 LEPROTL1O95214 131 aa6.87□□□□□ -1.31
PDGFB-204ENST00000455790 SPRR1AP35321 89 aa6.87□□□□□ -1.31
PDGFB-204ENST00000455790 DAND5Q8N907 189 aa6.87□□□□□ -1.31
PDGFB-204ENST00000455790 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
PDGFB-204ENST00000455790 MYMXA0A1B0GTQ4 84 aa6.86□□□□□ -1.31
PDGFB-204ENST00000455790 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
PDGFB-204ENST00000455790 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
PDGFB-204ENST00000455790 LEPROTO15243 131 aa6.85□□□□□ -1.31
PDGFB-204ENST00000455790 SLC7A5P1Q8MH63 180 aa6.85□□□□□ -1.31
PDGFB-204ENST00000455790 LINC00337Q8N6G1 96 aa6.85□□□□□ -1.31
PDGFB-204ENST00000455790 FABP4P15090 132 aa6.84□□□□□ -1.31
PDGFB-204ENST00000455790 PLNP26678 52 aa6.84□□□□□ -1.31
PDGFB-204ENST00000455790 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
PDGFB-204ENST00000455790 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
PDGFB-204ENST00000455790 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
PDGFB-204ENST00000455790 ETDCA0A1B0GVM5 59 aa6.83□□□□□ -1.32
PDGFB-204ENST00000455790 J3QQQ9 107 aa6.83□□□□□ -1.32
PDGFB-204ENST00000455790 DPM2O94777 84 aa6.83□□□□□ -1.32
PDGFB-204ENST00000455790 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
PDGFB-204ENST00000455790 ZNF706Q9Y5V0 76 aaPredicted RBP6.83□□□□□ -1.32
PDGFB-204ENST00000455790 COLCA2A8K830 154 aa6.82□□□□□ -1.32
PDGFB-204ENST00000455790 LINC00587B1AMM8 73 aa6.82□□□□□ -1.32
PDGFB-204ENST00000455790 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
PDGFB-204ENST00000455790 HSPB8Q9UJY1 196 aa6.82□□□□□ -1.32
PDGFB-204ENST00000455790 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
PDGFB-204ENST00000455790 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
PDGFB-204ENST00000455790 ERC2-IT1O76042 136 aa6.81□□□□□ -1.32
PDGFB-204ENST00000455790 IGKCP01834 107 aa6.81□□□□□ -1.32
PDGFB-204ENST00000455790 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
PDGFB-204ENST00000455790 Q8NBF4 154 aa6.81□□□□□ -1.32
PDGFB-204ENST00000455790 MUC17Q685J3 4493 aa6.81□□□□□ -1.32
PDGFB-204ENST00000455790 B5MCH6 92 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 DDTP30046 118 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 HERVK_113P61574 105 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 CTAG1AP78358 180 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
PDGFB-204ENST00000455790 TRBV10-2A0A0K0K1G8 114 aa6.79□□□□□ -1.32
PDGFB-204ENST00000455790 LGALS3P17931 250 aaKnown RBP6.79□□□□□ -1.32
PDGFB-204ENST00000455790 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
PDGFB-204ENST00000455790 Q9BRP9 147 aa6.79□□□□□ -1.32
PDGFB-204ENST00000455790 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
PDGFB-204ENST00000455790 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
PDGFB-204ENST00000455790 NMUP48645 174 aa6.78□□□□□ -1.32
PDGFB-204ENST00000455790 NPC2P61916 151 aa6.78□□□□□ -1.32
PDGFB-204ENST00000455790 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
PDGFB-204ENST00000455790 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
PDGFB-204ENST00000455790 IGLV6-57P01721 117 aa6.77□□□□□ -1.33
PDGFB-204ENST00000455790 Q6ZRX8 168 aa6.77□□□□□ -1.33
PDGFB-204ENST00000455790 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
PDGFB-204ENST00000455790 IGLV9-49A0A0B4J1Y8 123 aa6.76□□□□□ -1.33
PDGFB-204ENST00000455790 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
PDGFB-204ENST00000455790 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
PDGFB-204ENST00000455790 MOBPQ13875 183 aa6.76□□□□□ -1.33
PDGFB-204ENST00000455790 E9PLD3 99 aa6.75□□□□□ -1.33
PDGFB-204ENST00000455790 NDUFC2O95298 119 aa6.75□□□□□ -1.33
PDGFB-204ENST00000455790 S100A12P80511 92 aa6.75□□□□□ -1.33
PDGFB-204ENST00000455790 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
PDGFB-204ENST00000455790 TRAV23DV6A0A075B6W5 121 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms