RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 KRTAP19-8Q3LI54 63 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 CENPWQ5EE01 88 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 FAM74A1Q5RGS3 127 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 C2orf82Q6UX34 121 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 C15orf40Q8WUR7 153 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 ZCCHC13Q8WW36 166 aaKnown RBP2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 NPCDR1Q9BY65 106 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 TRBV20-1A0A075B6N2 111 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 TMSB15BA0A087X1C1 80 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 M0R378 163 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 SH2D1AO60880 128 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 CST7O76096 145 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 NCR2O95944 276 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 IFNA1P01562 189 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 FOXA3P55318 350 aaPredicted RBP2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 BATFQ16520 125 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 TMEM126AQ9H061 195 aa2.33□□□□□ -2.04
SBDSP1-204ENST00000453858 SMIM31A0A1B0GVY4 71 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 A8MWP4 228 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 TGFBR1P36897 503 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 MP68P56378 58 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 FAM19A3Q7Z5A8 133 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 LINC01551Q86U37 167 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 BORCS7Q96B45 105 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 YPEL4Q96NS1 127 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 BIN3Q9NQY0 253 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 TPRKBQ9Y3C4 175 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 ARL2-SNX15V9GYD0 113 aa2.32□□□□□ -2.04
SBDSP1-204ENST00000453858 IGKV2-28A0A075B6P5 120 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 UBE2L5PA0A1B0GUS4 154 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 IGKV2D-28P01615 120 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 CXCL5P42830 114 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 NMUP48645 174 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 TMEM128Q5BJH2 165 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 SMIM20Q8N5G0 67 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 PACRGLQ8N7B6 248 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 C5orf17Q8NAS9 161 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 MCFD2Q8NI22 146 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 HIGD2AQ9BW72 106 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 GSKIPQ9P0R6 139 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 EPDR1Q9UM22 224 aa2.31□□□□□ -2.04
SBDSP1-204ENST00000453858 TRAV13-1A0A0B4J241 112 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 A0A1B0GV50 99 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 SCO1O75880 301 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 SMIM17P0DL12 118 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 SCGB1C2P0DMR2 95 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 DEFA3P59666 94 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 JOSD1Q15040 202 aaPredicted RBP2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 Q5VV11 94 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 SCGB1C1Q8TD33 95 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 ANAPC13Q9BS18 74 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 CCDC32Q9BV29 185 aa2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
SBDSP1-204ENST00000453858 C9JQL5 133 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 TSTD3H0UI37 97 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 PDE6DO43924 150 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 SFT2D2O95562 160 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 APCSP02743 223 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 CXCL1P09341 107 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 SCGB1A1P11684 91 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 S100A11P31949 105 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 KHDC3LQ587J8 217 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 SPANXN1Q5VSR9 72 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 OR13C6PQ8NH95 151 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 AP1S3Q96PC3 154 aa2.29□□□□□ -2.04
SBDSP1-204ENST00000453858 FXYD6-FXYD2A0A087WZ82 144 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 INMT-MINDY4F8WBC2 141 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 MGPP08493 103 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 HRES1P13985 223 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 NCS1P62166 190 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 SSBP1Q04837 148 aaKnown RBP2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 RNASE13Q5GAN3 156 aaKnown RBP2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 FA2HQ7L5A8 372 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 ATP5L2Q7Z4Y8 100 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 SND1-IT1Q9HBX3 110 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 C8orf17Q9NRJ1 99 aa2.28□□□□□ -2.04
SBDSP1-204ENST00000453858 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
SBDSP1-204ENST00000453858 BPY2O14599 106 aa2.27□□□□□ -2.05
SBDSP1-204ENST00000453858 PPBPP02775 128 aa2.27□□□□□ -2.05
SBDSP1-204ENST00000453858 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
SBDSP1-204ENST00000453858 C10orf91Q5T1B1 145 aa2.27□□□□□ -2.05
SBDSP1-204ENST00000453858 RNASE7Q9H1E1 156 aaKnown RBP2.27□□□□□ -2.05
SBDSP1-204ENST00000453858 IGSF23A1L1A6 192 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 LTAP01374 205 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 AKAIN1P0CW23 69 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 LINC00313P59037 77 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 TAS2R45P59539 299 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 PCP2Q8IVA1 136 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 ORMDL3Q8N138 153 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 SMCR5Q8TEV8 140 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 VCXQ9H320 206 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 TMEM242Q9NWH2 141 aa2.26□□□□□ -2.05
SBDSP1-204ENST00000453858 A0A096LNJ9 63 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms