RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SOSTDC1Q6X4U4 206 aa12.52□□□□□ -0.4
SGCE-207ENST00000447873 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.41
SGCE-207ENST00000447873 A0A1B0GVY2 172 aa12.51□□□□□ -0.41
SGCE-207ENST00000447873 C9orf129Q5T035 196 aaKnown RBP12.51□□□□□ -0.41
SGCE-207ENST00000447873 CEND1Q8N111 149 aa12.51□□□□□ -0.41
SGCE-207ENST00000447873 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
SGCE-207ENST00000447873 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
SGCE-207ENST00000447873 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
SGCE-207ENST00000447873 DNAH5Q8TE73 4624 aa12.48□□□□□ -0.41
SGCE-207ENST00000447873 CHTF8P0CG12 524 aa12.48□□□□□ -0.41
SGCE-207ENST00000447873 PPDPFQ9H3Y8 114 aa12.48□□□□□ -0.41
SGCE-207ENST00000447873 LINC00474Q9P2X8 69 aa12.48□□□□□ -0.41
SGCE-207ENST00000447873 HINT1P49773 126 aaPredicted RBP12.46□□□□□ -0.42
SGCE-207ENST00000447873 A4D1N5 150 aa12.45□□□□□ -0.42
SGCE-207ENST00000447873 M0R143 59 aa12.45□□□□□ -0.42
SGCE-207ENST00000447873 FXYD2P54710 66 aa12.45□□□□□ -0.42
SGCE-207ENST00000447873 DPH3Q96FX2 82 aa12.44□□□□□ -0.42
SGCE-207ENST00000447873 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 A6NJY4 79 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 BVES-AS1Q5T3Y7 98 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.43□□□□□ -0.42
SGCE-207ENST00000447873 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 PANO1I0J062 215 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 NDUFC2O95298 119 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 Q8NDZ9 215 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 SPACA4Q8TDM5 124 aa12.43□□□□□ -0.42
SGCE-207ENST00000447873 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
SGCE-207ENST00000447873 PLA2G2DQ9UNK4 145 aa12.42□□□□□ -0.42
SGCE-207ENST00000447873 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
SGCE-207ENST00000447873 SERTAD4-AS1Q5TG53 156 aa12.41□□□□□ -0.42
SGCE-207ENST00000447873 FAM19A5Q7Z5A7 132 aaPredicted RBP12.41□□□□□ -0.42
SGCE-207ENST00000447873 VPREB1P12018 145 aa12.4□□□□□ -0.42
SGCE-207ENST00000447873 PKHD1P08F94 4074 aa12.4□□□□□ -0.42
SGCE-207ENST00000447873 BATFQ16520 125 aa12.39□□□□□ -0.43
SGCE-207ENST00000447873 A0A1W2PNN7 141 aa12.39□□□□□ -0.43
SGCE-207ENST00000447873 NCR3O14931 201 aa12.39□□□□□ -0.43
SGCE-207ENST00000447873 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
SGCE-207ENST00000447873 NHP2Q9NX24 153 aaKnown RBP12.38□□□□□ -0.43
SGCE-207ENST00000447873 IGKV2-28A0A075B6P5 120 aa12.37□□□□□ -0.43
SGCE-207ENST00000447873 IGKV2D-28P01615 120 aa12.37□□□□□ -0.43
SGCE-207ENST00000447873 KRTAP7-1Q8IUC3 87 aa12.37□□□□□ -0.43
SGCE-207ENST00000447873 CFC1BP0CG36 223 aa12.36□□□□□ -0.43
SGCE-207ENST00000447873 CFC1P0CG37 223 aa12.36□□□□□ -0.43
SGCE-207ENST00000447873 DNAH8Q96JB1 4490 aa12.36□□□□□ -0.43
SGCE-207ENST00000447873 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 A0A087WYN8 130 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 TRBV10-2A0A0K0K1G8 114 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 A6NDN8 102 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 RAB37Q96AX2 223 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 FAM30AQ9NZY2 134 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 C22orf24Q9Y442 160 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 M0R378 163 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 Q6ZSA8 131 aa12.35□□□□□ -0.43
SGCE-207ENST00000447873 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
SGCE-207ENST00000447873 A0A0B4J2C4 111 aa12.34□□□□□ -0.43
SGCE-207ENST00000447873 M0QXV9 152 aa12.34□□□□□ -0.43
SGCE-207ENST00000447873 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
SGCE-207ENST00000447873 S100A7L2Q5SY68 101 aa12.33□□□□□ -0.44
SGCE-207ENST00000447873 OR13C6PQ8NH95 151 aa12.33□□□□□ -0.44
SGCE-207ENST00000447873 SNHG12Q9BXW3 62 aa12.33□□□□□ -0.44
SGCE-207ENST00000447873 K7ERJ3 54 aa12.32□□□□□ -0.44
SGCE-207ENST00000447873 MRPL55Q7Z7F7 128 aaKnown RBP12.32□□□□□ -0.44
SGCE-207ENST00000447873 GAGE10A6NGK3 116 aa12.31□□□□□ -0.44
SGCE-207ENST00000447873 C7orf33Q8WU49 177 aa12.31□□□□□ -0.44
SGCE-207ENST00000447873 PLAC8Q9NZF1 115 aa12.31□□□□□ -0.44
SGCE-207ENST00000447873 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
SGCE-207ENST00000447873 EPM2AB3EWF7 344 aa12.3□□□□□ -0.44
SGCE-207ENST00000447873 LBHQ53QV2 105 aaPredicted RBP12.3□□□□□ -0.44
SGCE-207ENST00000447873 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
SGCE-207ENST00000447873 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
SGCE-207ENST00000447873 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
SGCE-207ENST00000447873 LRP1BQ9NZR2 4599 aa12.29□□□□□ -0.44
SGCE-207ENST00000447873 DYNC1H1Q14204 4646 aaKnown RBP12.29□□□□□ -0.44
SGCE-207ENST00000447873 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
SGCE-207ENST00000447873 RPL13AP40429 203 aaKnown RBP12.28□□□□□ -0.44
SGCE-207ENST00000447873 SCXQ7RTU7 201 aa12.28□□□□□ -0.44
SGCE-207ENST00000447873 PHF5AQ7RTV0 110 aaKnown RBP12.28□□□□□ -0.44
SGCE-207ENST00000447873 CIRBP-AS1Q8TBR5 109 aa12.28□□□□□ -0.44
SGCE-207ENST00000447873 IGLV6-57P01721 117 aa12.27□□□□□ -0.44
SGCE-207ENST00000447873 LCE2DQ5TA82 110 aaPredicted RBP12.27□□□□□ -0.44
SGCE-207ENST00000447873 RPL37AP8A6NKH3 93 aa12.26□□□□□ -0.45
SGCE-207ENST00000447873 H7C2G1 150 aa12.26□□□□□ -0.45
SGCE-207ENST00000447873 UBE2BP63146 152 aa12.25□□□□□ -0.45
SGCE-207ENST00000447873 HAMPP81172 84 aa12.25□□□□□ -0.45
SGCE-207ENST00000447873 IGLV1-50A0A075B6I6 118 aa12.24□□□□□ -0.45
SGCE-207ENST00000447873 Q1RN00 199 aa12.24□□□□□ -0.45
SGCE-207ENST00000447873 COL5A1-AS1Q5SY13 56 aa12.22□□□□□ -0.45
SGCE-207ENST00000447873 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
SGCE-207ENST00000447873 TRAV23DV6A0A075B6W5 121 aa12.21□□□□□ -0.46
SGCE-207ENST00000447873 SMIM11BQ8TCY0 68 aa12.2□□□□□ -0.46
SGCE-207ENST00000447873 TSPAN13O95857 204 aa12.19□□□□□ -0.46
SGCE-207ENST00000447873 KCNQ1DNQ9H478 68 aa12.19□□□□□ -0.46
SGCE-207ENST00000447873 PRYO14603 147 aa12.18□□□□□ -0.46
SGCE-207ENST00000447873 XGP55808 180 aa12.18□□□□□ -0.46
SGCE-207ENST00000447873 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
SGCE-207ENST00000447873 KRTAP11-1Q8IUC1 163 aa12.17□□□□□ -0.46
SGCE-207ENST00000447873 TAX1BP3O14907 124 aa12.16□□□□□ -0.46
SGCE-207ENST00000447873 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
SGCE-207ENST00000447873 PSMB2P49721 201 aa12.15□□□□□ -0.46
SGCE-207ENST00000447873 REG3GQ6UW15 175 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms