RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 F8VRH5 84 aa4.8□□□□□ -1.64
SMARCE1-206ENST00000447024 H3BRM9 83 aa4.8□□□□□ -1.64
SMARCE1-206ENST00000447024 HBDP02042 147 aa4.8□□□□□ -1.64
SMARCE1-206ENST00000447024 LINC00469Q8N7U9 141 aa4.8□□□□□ -1.64
SMARCE1-206ENST00000447024 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
SMARCE1-206ENST00000447024 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 A0A1W2PNN7 141 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 SMIM1B2RUZ4 78 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 ZC2HC1BQ5TFG8 222 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 SFTA2Q6UW10 78 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 CHCHD1Q96BP2 118 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 TOMM7Q9P0U1 55 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
SMARCE1-206ENST00000447024 A0A096LNJ9 63 aa4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 IGLC3P0DOY3 106 aa4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 HNRNPA3P51991 378 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 REG3GQ6UW15 175 aa4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 C2orf82Q6UX34 121 aa4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 COX7B2Q8TF08 81 aa4.78□□□□□ -1.64
SMARCE1-206ENST00000447024 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMARCE1-206ENST00000447024 GAGE2EQ4V326 116 aa4.77□□□□□ -1.65
SMARCE1-206ENST00000447024 GAGE2DQ9UEU5 116 aa4.77□□□□□ -1.65
SMARCE1-206ENST00000447024 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
SMARCE1-206ENST00000447024 TRAV12-1A0A0B4J245 112 aa4.76□□□□□ -1.65
SMARCE1-206ENST00000447024 LBHQ53QV2 105 aaPredicted RBP4.76□□□□□ -1.65
SMARCE1-206ENST00000447024 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
SMARCE1-206ENST00000447024 M0QXV9 152 aa4.75□□□□□ -1.65
SMARCE1-206ENST00000447024 TRGC2P03986 189 aa4.75□□□□□ -1.65
SMARCE1-206ENST00000447024 COX17Q14061 63 aa4.75□□□□□ -1.65
SMARCE1-206ENST00000447024 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
SMARCE1-206ENST00000447024 HSBP1O75506 76 aa4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 NDUFA6P56556 154 aa4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 PHF5AQ7RTV0 110 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 BAGE3Q86Y29 109 aa4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 IFI27L1Q96BM0 104 aa4.74□□□□□ -1.65
SMARCE1-206ENST00000447024 NUPR1O60356 82 aa4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 IGLV7-43P04211 117 aa4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 SPINK8P0C7L1 97 aa4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 MT1HL1P0DM35 61 aa4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 UBE2BP63146 152 aa4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 FAM19A5Q7Z5A7 132 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 CHTOPQ9Y3Y2 248 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-206ENST00000447024 FAM168BA1KXE4 195 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 LINC00587B1AMM8 73 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BKO60814 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BJP06899 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BOP23527 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BBP33778 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BDP58876 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BCP62807 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 PMCHL1Q16048 86 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST2H2BEQ16778 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 TMEM170BQ5T4T1 132 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BHQ93079 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 LITAFQ99732 161 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BNQ99877 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 HIST1H2BMQ99879 126 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 C22orf24Q9Y442 160 aa4.72□□□□□ -1.65
SMARCE1-206ENST00000447024 MRPL55Q7Z7F7 128 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-206ENST00000447024 XAGE1AQ9HD64 81 aa4.71□□□□□ -1.66
SMARCE1-206ENST00000447024 HSPB8Q9UJY1 196 aa4.71□□□□□ -1.66
SMARCE1-206ENST00000447024 A4D1N5 150 aa4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 H0Y9J4 135 aa4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 LEPROTL1O95214 131 aa4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 KRTAP10-8P60410 259 aa4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 HERV-K104P63124 156 aa4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 ZNF625Q96I27 306 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 ERG28Q9UKR5 140 aa4.7□□□□□ -1.66
SMARCE1-206ENST00000447024 IGLV1-50A0A075B6I6 118 aa4.69□□□□□ -1.66
SMARCE1-206ENST00000447024 TMEM223A0PJW6 202 aa4.69□□□□□ -1.66
SMARCE1-206ENST00000447024 ZNF861PO60384 105 aa4.69□□□□□ -1.66
SMARCE1-206ENST00000447024 SERF1AO75920 110 aa4.69□□□□□ -1.66
SMARCE1-206ENST00000447024 PLNP26678 52 aa4.69□□□□□ -1.66
SMARCE1-206ENST00000447024 NKAPP1Q8N9T2 125 aa4.69□□□□□ -1.66
SMARCE1-206ENST00000447024 TNXBP22105 4242 aa4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 LOC105371267A0A1B0GV96 52 aa4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 C5orf52A6NGY3 159 aa4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 RPL28P46779 137 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 COA6Q5JTJ3 125 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 FAM19A2Q8N3H0 131 aa4.68□□□□□ -1.66
SMARCE1-206ENST00000447024 BCE1O60756 84 aa4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 PFN2P35080 140 aa4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 RPL13AP40429 203 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 SNRPEP62304 92 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 PLEKHB2Q96CS7 222 aa4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 LINC00167Q96N53 147 aa4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 SND1-IT1Q9HBX3 110 aa4.67□□□□□ -1.66
SMARCE1-206ENST00000447024 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms