RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CHTF8P0CG12 524 aa4.03□□□□□ -1.76
HERC4-206ENST00000427635 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
HERC4-206ENST00000427635 H3BNG1 76 aa4.02□□□□□ -1.77
HERC4-206ENST00000427635 C11orf1Q9H5F2 150 aa4.02□□□□□ -1.77
HERC4-206ENST00000427635 CEP350Q5VT06 3117 aa4.02□□□□□ -1.77
HERC4-206ENST00000427635 NCOA6Q14686 2063 aaPredicted RBP4.02□□□□□ -1.77
HERC4-206ENST00000427635 MALRD1Q5VYJ5 2156 aa4.02□□□□□ -1.77
HERC4-206ENST00000427635 NOTCH4Q99466 2003 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 LINC00242Q5T6M2 205 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 FN1P02751 2386 aaKnown RBP4.01□□□□□ -1.77
HERC4-206ENST00000427635 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
HERC4-206ENST00000427635 C1orf64Q8NEQ6 169 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 ALPK3Q96L96 1907 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
HERC4-206ENST00000427635 COL4A3Q01955 1670 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 C11orf72Q8NBR9 251 aa4.01□□□□□ -1.77
HERC4-206ENST00000427635 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
HERC4-206ENST00000427635 PRR3P79522 188 aaKnown RBP4□□□□□ -1.77
HERC4-206ENST00000427635 Q6ZSN1 163 aa4□□□□□ -1.77
HERC4-206ENST00000427635 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
HERC4-206ENST00000427635 PTPRSQ13332 1948 aa3.99□□□□□ -1.77
HERC4-206ENST00000427635 MED13Q9UHV7 2174 aa3.99□□□□□ -1.77
HERC4-206ENST00000427635 C6orf48Q9UBA6 75 aa3.99□□□□□ -1.77
HERC4-206ENST00000427635 ADAMTS20P59510 1910 aa3.99□□□□□ -1.77
HERC4-206ENST00000427635 BCE1O60756 84 aa3.99□□□□□ -1.77
HERC4-206ENST00000427635 PCNX3Q9H6A9 2034 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 A0A087WYN8 130 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 EPM2AB3EWF7 344 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 C11orf21Q9P2W6 132 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 EXPH5Q8NEV8 1989 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
HERC4-206ENST00000427635 TLN2Q9Y4G6 2542 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 PCDH15Q96QU1 1955 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 M0R2T5 61 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 ATG2AQ2TAZ0 1938 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 KIAA1549Q9HCM3 1950 aa3.97□□□□□ -1.77
HERC4-206ENST00000427635 HELZ2Q9BYK8 2649 aaKnown RBP3.96□□□□□ -1.77
HERC4-206ENST00000427635 IGIPA6NJ69 53 aa3.96□□□□□ -1.78
HERC4-206ENST00000427635 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
HERC4-206ENST00000427635 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
HERC4-206ENST00000427635 FREM1Q5H8C1 2179 aa3.95□□□□□ -1.78
HERC4-206ENST00000427635 MAST4O15021 2626 aa3.95□□□□□ -1.78
HERC4-206ENST00000427635 APLNQ9ULZ1 77 aa3.95□□□□□ -1.78
HERC4-206ENST00000427635 C9orf92A6NGG3 77 aa3.94□□□□□ -1.78
HERC4-206ENST00000427635 Q8N3U1 123 aa3.94□□□□□ -1.78
HERC4-206ENST00000427635 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
HERC4-206ENST00000427635 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
HERC4-206ENST00000427635 AMELXQ99217 191 aa3.94□□□□□ -1.78
HERC4-206ENST00000427635 A0A1B0GW54 56 aa3.93□□□□□ -1.78
HERC4-206ENST00000427635 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
HERC4-206ENST00000427635 ITPR3Q14573 2671 aa3.93□□□□□ -1.78
HERC4-206ENST00000427635 CNFNQ9BYD5 112 aa3.92□□□□□ -1.78
HERC4-206ENST00000427635 SMIM29Q86T20 159 aa3.92□□□□□ -1.78
HERC4-206ENST00000427635 H3BPC8 53 aa3.92□□□□□ -1.78
HERC4-206ENST00000427635 ST20-AS1Q8NBB2 130 aa3.92□□□□□ -1.78
HERC4-206ENST00000427635 C2orf91Q6ZV80 131 aa3.92□□□□□ -1.78
HERC4-206ENST00000427635 LRP4O75096 1905 aa3.92□□□□□ -1.78
HERC4-206ENST00000427635 C9orf163Q8N9P6 203 aa3.91□□□□□ -1.78
HERC4-206ENST00000427635 CRIPTQ9P021 101 aa3.91□□□□□ -1.78
HERC4-206ENST00000427635 TNCP24821 2201 aa3.91□□□□□ -1.78
HERC4-206ENST00000427635 MUC22E2RYF6 1773 aaPredicted RBP3.91□□□□□ -1.78
HERC4-206ENST00000427635 A8MTW9 85 aa3.91□□□□□ -1.78
HERC4-206ENST00000427635 LINC00476Q8WZB0 136 aa3.91□□□□□ -1.78
HERC4-206ENST00000427635 A0A1W2PPR1 153 aa3.91□□□□□ -1.78
HERC4-206ENST00000427635 MED12LQ86YW9 2145 aa3.9□□□□□ -1.78
HERC4-206ENST00000427635 GVQW2A0A096LPI5 108 aaPredicted RBP3.9□□□□□ -1.78
HERC4-206ENST00000427635 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.78
HERC4-206ENST00000427635 SHANK1Q9Y566 2161 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 IGLV8-61A0A075B6I0 122 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 LOC101927531A0A1B0GV80 90 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 Q6ZRX8 168 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 K7EIL1 84 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 Q6ZSA8 131 aa3.9□□□□□ -1.79
HERC4-206ENST00000427635 TSPEAR-AS2P59090 65 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
HERC4-206ENST00000427635 Q6ZPA2 131 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 Q8NAQ8 132 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 DSCAML1Q8TD84 2053 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 ACANP16112 2415 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
HERC4-206ENST00000427635 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
HERC4-206ENST00000427635 UNC79Q9P2D8 2635 aa3.88□□□□□ -1.79
HERC4-206ENST00000427635 SSBP3-AS1Q7Z2R9 100 aa3.88□□□□□ -1.79
HERC4-206ENST00000427635 OBSCN-AS1Q96MR7 158 aa3.88□□□□□ -1.79
HERC4-206ENST00000427635 DSCR10P59022 87 aa3.88□□□□□ -1.79
HERC4-206ENST00000427635 ADAMTSL4-AS1Q5T5F5 129 aa3.88□□□□□ -1.79
HERC4-206ENST00000427635 MRPL34Q9BQ48 92 aaKnown RBP3.88□□□□□ -1.79
HERC4-206ENST00000427635 A0A087WTM6 91 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 PRR14LQ5THK1 2151 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 CPAMD8Q8IZJ3 1885 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 C19orf73Q9NVV2 129 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 TANC2Q9HCD6 1990 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms