RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 CCL22O00626 93 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 NKTRP30414 1462 aaKnown RBP-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 SARNPP82979 210 aaKnown RBP-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 ANKRD11Q6UB99 2663 aaPredicted RBP-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 HEPN1Q6WQI6 88 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 NEBP20929 6669 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 FAT3Q8TDW7 4589 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 PKHD1L1Q86WI1 4243 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 RGPD2P0DJD1 1756 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 LRRC37AA6NMS7 1700 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 SPHKAPQ2M3C7 1700 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 PZPP20742 1482 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MRC2Q9UBG0 1479 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 EDC4Q6P2E9 1401 aaKnown RBP-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 H3BQF6 201 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MRPS10P82664 201 aaKnown RBP-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 C6orf201Q7Z4U5 140 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 TMEM203Q969S6 136 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MTORP42345 2549 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 CCDC168Q8NDH2 2452 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 FAM186AA6NE01 2351 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MUC17Q685J3 4493 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 KIAA1551Q9HCM1 1747 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 TOPAZ1Q8N9V7 1692 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 PKD1L2Q7Z442 2459 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 LYSTQ99698 3801 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 SLIT1O75093 1534 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 A0A087WVE0 104 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 C7orf77A4D0Y5 90 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 H3BNG1 76 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 H3BQ15 152 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 GNGT1P63211 74 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 GTF2H5Q6ZYL4 71 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CGREF1Q99674 301 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 MRPL34Q9BQ48 92 aaKnown RBP-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CDKN2A-AS1Q9UH64 79 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 LAMA1P25391 3075 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 KIF20BQ96Q89 1820 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 DMXL1Q9Y485 3027 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CUBNO60494 3623 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 COL4A6Q14031 1691 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CHD1O14646 1710 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 A0A0G2JND7 137 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 SPTY2D1-AS1A0A0U1RR47 76 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 TMEM262E9PQX1 116 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 ARMS2P0C7Q2 107 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 LELP1Q5T871 98 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 SPRR2FQ96RM1 72 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 HIGD1BQ9P298 99 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 CEP290O15078 2479 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 PTPN23Q9H3S7 1636 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 MGAM2Q2M2H8 2515 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 CLIP1P30622 1438 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 BCORQ6W2J9 1755 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 UTP20O75691 2785 aaKnown RBP-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 KNDC1Q76NI1 1749 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 KALRNO60229 2985 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 H0Y9P7 68 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 DEFB107AQ8IZN7 70 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 PSENENQ9NZ42 101 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 EPPK1P58107 5090 aaKnown RBP-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 ADAMTS12P58397 1594 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 A0A0C4DFX4 3053 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 RYR1P21817 5038 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 NBEAQ8NFP9 2946 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 NIPBLQ6KC79 2804 aaeCLIP-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 TRBV7-7A0A0K0K1E9 115 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 HSD52Q0P140 79 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 PMCHL1Q16048 86 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 PSMG4Q5JS54 123 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 WFDC13Q8IUB5 93 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 FAM135AQ9P2D6 1515 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 MON2Q7Z3U7 1717 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 GCN1Q92616 2671 aaKnown RBP-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 SHPRHQ149N8 1683 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 TARBP1Q13395 1621 aaKnown RBP-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 RIF1Q5UIP0 2472 aaKnown RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 LAMA2P24043 3122 aaKnown RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 ABCA3Q99758 1704 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 HYDINQ4G0P3 5121 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 NDUFC1O43677 76 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 MT1AP04731 61 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 NMSQ5H8A3 153 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 C2orf88Q9BSF0 95 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 AP4S1Q9Y587 144 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 UBR3Q6ZT12 1888 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 TROQ12816 1431 aaPredicted RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 NCOA3Q9Y6Q9 1424 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 CICQ96RK0 1608 aaPredicted RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 DNAH11Q96DT5 4516 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 VPS13BQ7Z7G8 4022 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 TRBV25-1A0A075B6N4 114 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 CACFD1Q9UGQ2 172 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 ABCC5O15440 1437 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 TEX15Q9BXT5 2789 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 C4AP0C0L4 1744 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 C4BP0C0L5 1744 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 C5P01031 1676 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 SCN11AQ9UI33 1791 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 hADV29S1A0JD25 119 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms