RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
DDX55-203ENST00000421670 KIAA1109Q2LD37 5005 aa9.94□□□□□ -0.82
DDX55-203ENST00000421670 TIMM17BO60830 172 aa9.93□□□□□ -0.82
DDX55-203ENST00000421670 XGP55808 180 aa9.93□□□□□ -0.82
DDX55-203ENST00000421670 SERTAD4-AS1Q5TG53 156 aa9.92□□□□□ -0.82
DDX55-203ENST00000421670 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
DDX55-203ENST00000421670 KRTAP7-1Q8IUC3 87 aa9.92□□□□□ -0.82
DDX55-203ENST00000421670 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
DDX55-203ENST00000421670 DLEU1O43261 78 aa9.92□□□□□ -0.82
DDX55-203ENST00000421670 PLAC8Q9NZF1 115 aa9.92□□□□□ -0.82
DDX55-203ENST00000421670 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
DDX55-203ENST00000421670 Q8NDZ9 215 aa9.91□□□□□ -0.82
DDX55-203ENST00000421670 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
DDX55-203ENST00000421670 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
DDX55-203ENST00000421670 C12orf57Q99622 126 aa9.9□□□□□ -0.82
DDX55-203ENST00000421670 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
DDX55-203ENST00000421670 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
DDX55-203ENST00000421670 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
DDX55-203ENST00000421670 RYR1P21817 5038 aa9.89□□□□□ -0.83
DDX55-203ENST00000421670 CDK2AP2O75956 126 aa9.88□□□□□ -0.83
DDX55-203ENST00000421670 LINC00308Q8TCZ7 52 aa9.88□□□□□ -0.83
DDX55-203ENST00000421670 M0QXV9 152 aa9.88□□□□□ -0.83
DDX55-203ENST00000421670 C2orf91Q6ZV80 131 aa9.88□□□□□ -0.83
DDX55-203ENST00000421670 PRO1933Q9H354 126 aa9.88□□□□□ -0.83
DDX55-203ENST00000421670 VPREB1P12018 145 aa9.87□□□□□ -0.83
DDX55-203ENST00000421670 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
DDX55-203ENST00000421670 FAT1Q14517 4588 aa9.87□□□□□ -0.83
DDX55-203ENST00000421670 LOC107984156A0A0G2JMH3 177 aa9.86□□□□□ -0.83
DDX55-203ENST00000421670 EPM2AB3EWF7 344 aa9.86□□□□□ -0.83
DDX55-203ENST00000421670 PHF5AQ7RTV0 110 aaKnown RBP9.86□□□□□ -0.83
DDX55-203ENST00000421670 ARL17AQ8IVW1 177 aa9.86□□□□□ -0.83
DDX55-203ENST00000421670 SPANXB1Q9NS25 103 aaPredicted RBP9.86□□□□□ -0.83
DDX55-203ENST00000421670 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
DDX55-203ENST00000421670 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
DDX55-203ENST00000421670 SRSF9Q13242 221 aaKnown RBP eCLIP9.85□□□□□ -0.83
DDX55-203ENST00000421670 NKAPP1Q8N9T2 125 aa9.85□□□□□ -0.83
DDX55-203ENST00000421670 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
DDX55-203ENST00000421670 RPL24P83731 157 aaKnown RBP9.84□□□□□ -0.83
DDX55-203ENST00000421670 LINC00518Q8N0U6 118 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 NCR3O14931 201 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 Q6ZVH6 145 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 HIGD1BQ9P298 99 aa9.84□□□□□ -0.83
DDX55-203ENST00000421670 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
DDX55-203ENST00000421670 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
DDX55-203ENST00000421670 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
DDX55-203ENST00000421670 IFITM1P13164 125 aa9.82□□□□□ -0.84
DDX55-203ENST00000421670 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
DDX55-203ENST00000421670 C7orf33Q8WU49 177 aa9.81□□□□□ -0.84
DDX55-203ENST00000421670 COPS9Q8WXC6 57 aa9.8□□□□□ -0.84
DDX55-203ENST00000421670 NDUFC2O95298 119 aa9.8□□□□□ -0.84
DDX55-203ENST00000421670 KRTAP11-1Q8IUC1 163 aa9.8□□□□□ -0.84
DDX55-203ENST00000421670 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
DDX55-203ENST00000421670 LINC00167Q96N53 147 aa9.8□□□□□ -0.84
DDX55-203ENST00000421670 SRRM2Q9UQ35 2752 aaKnown RBP9.79□□□□□ -0.84
DDX55-203ENST00000421670 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
DDX55-203ENST00000421670 UBE2BP63146 152 aa9.79□□□□□ -0.84
DDX55-203ENST00000421670 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
DDX55-203ENST00000421670 M0R378 163 aa9.78□□□□□ -0.84
DDX55-203ENST00000421670 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
DDX55-203ENST00000421670 HNRNPA3P51991 378 aaKnown RBP9.78□□□□□ -0.84
DDX55-203ENST00000421670 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
DDX55-203ENST00000421670 KRTAP17-1Q9BYP8 105 aa9.77□□□□□ -0.85
DDX55-203ENST00000421670 PPDPFQ9H3Y8 114 aa9.77□□□□□ -0.85
DDX55-203ENST00000421670 TSTD3H0UI37 97 aa9.76□□□□□ -0.85
DDX55-203ENST00000421670 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
DDX55-203ENST00000421670 A4D1N5 150 aa9.75□□□□□ -0.85
DDX55-203ENST00000421670 TRBV10-3A0A0K0K1G6 114 aa9.75□□□□□ -0.85
DDX55-203ENST00000421670 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
DDX55-203ENST00000421670 IGLV1-50A0A075B6I6 118 aa9.74□□□□□ -0.85
DDX55-203ENST00000421670 HSD52Q0P140 79 aa9.74□□□□□ -0.85
DDX55-203ENST00000421670 TAL2Q16559 108 aa9.74□□□□□ -0.85
DDX55-203ENST00000421670 CEND1Q8N111 149 aa9.74□□□□□ -0.85
DDX55-203ENST00000421670 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
DDX55-203ENST00000421670 DDTP30046 118 aa9.73□□□□□ -0.85
DDX55-203ENST00000421670 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
DDX55-203ENST00000421670 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
DDX55-203ENST00000421670 FXYD2P54710 66 aa9.71□□□□□ -0.85
DDX55-203ENST00000421670 Q5VSD8 79 aa9.71□□□□□ -0.85
DDX55-203ENST00000421670 OR13C6PQ8NH95 151 aa9.71□□□□□ -0.85
DDX55-203ENST00000421670 HERC2O95714 4834 aa9.71□□□□□ -0.86
DDX55-203ENST00000421670 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
DDX55-203ENST00000421670 IGLV6-57P01721 117 aa9.71□□□□□ -0.86
DDX55-203ENST00000421670 Q8N1X5 172 aa9.71□□□□□ -0.86
DDX55-203ENST00000421670 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
DDX55-203ENST00000421670 A6NDN8 102 aa9.69□□□□□ -0.86
DDX55-203ENST00000421670 CTAG1AP78358 180 aa9.69□□□□□ -0.86
DDX55-203ENST00000421670 KRTAP10-4P60372 401 aaPredicted RBP9.68□□□□□ -0.86
DDX55-203ENST00000421670 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
DDX55-203ENST00000421670 REG3GQ6UW15 175 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 TRAV23DV6A0A075B6W5 121 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 TRAV13-2A0A0B4J235 113 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 TMEM238LA0A1B0GVL6 79 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 A6NJY4 79 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 PRYO14603 147 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 CFC1BP0CG36 223 aa9.67□□□□□ -0.86
DDX55-203ENST00000421670 CFC1P0CG37 223 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms