RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 C1orf134Q5TEV5 83 aa8.2□□□□□ -1.1
UBR4-205ENST00000417040 OTOGLQ3ZCN5 2332 aa8.2□□□□□ -1.1
UBR4-205ENST00000417040 K7EQZ3 153 aa8.19□□□□□ -1.1
UBR4-205ENST00000417040 BCE1O60756 84 aa8.19□□□□□ -1.1
UBR4-205ENST00000417040 Q6ZRX8 168 aa8.18□□□□□ -1.1
UBR4-205ENST00000417040 MUC6Q6W4X9 2439 aa8.18□□□□□ -1.1
UBR4-205ENST00000417040 Q8NBF4 154 aa8.17□□□□□ -1.1
UBR4-205ENST00000417040 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
UBR4-205ENST00000417040 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
UBR4-205ENST00000417040 TP53AIP1Q9HCN2 124 aa8.17□□□□□ -1.1
UBR4-205ENST00000417040 PTPN13Q12923 2485 aa8.16□□□□□ -1.1
UBR4-205ENST00000417040 TRBV7-4A0A0J9YYF1 115 aa8.16□□□□□ -1.1
UBR4-205ENST00000417040 CUL9Q8IWT3 2517 aa8.16□□□□□ -1.1
UBR4-205ENST00000417040 Q6ZRP5 223 aa8.15□□□□□ -1.1
UBR4-205ENST00000417040 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
UBR4-205ENST00000417040 C8orf87E5RJ46 101 aa8.15□□□□□ -1.11
UBR4-205ENST00000417040 HIVEP3Q5T1R4 2406 aa8.14□□□□□ -1.11
UBR4-205ENST00000417040 A0A0G2JQZ4 141 aa8.14□□□□□ -1.11
UBR4-205ENST00000417040 A0A1W2PNN7 141 aa8.14□□□□□ -1.11
UBR4-205ENST00000417040 COA5Q86WW8 74 aa8.14□□□□□ -1.11
UBR4-205ENST00000417040 MDFIQ99750 246 aa8.14□□□□□ -1.11
UBR4-205ENST00000417040 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
UBR4-205ENST00000417040 LINC00313P59037 77 aa8.13□□□□□ -1.11
UBR4-205ENST00000417040 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
UBR4-205ENST00000417040 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
UBR4-205ENST00000417040 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
UBR4-205ENST00000417040 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
UBR4-205ENST00000417040 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
UBR4-205ENST00000417040 WDR87Q6ZQQ6 2873 aa8.08□□□□□ -1.12
UBR4-205ENST00000417040 Q96NJ1 140 aa8.08□□□□□ -1.12
UBR4-205ENST00000417040 PIEZO2Q9H5I5 2752 aa8.08□□□□□ -1.12
UBR4-205ENST00000417040 VPREB1P12018 145 aa8.08□□□□□ -1.12
UBR4-205ENST00000417040 H3BPC8 53 aa8.07□□□□□ -1.12
UBR4-205ENST00000417040 BDP1A6H8Y1 2624 aa8.07□□□□□ -1.12
UBR4-205ENST00000417040 MUC4Q99102 2169 aa8.06□□□□□ -1.12
UBR4-205ENST00000417040 COL4A2P08572 1712 aa8.06□□□□□ -1.12
UBR4-205ENST00000417040 A8MWP4 228 aa8.05□□□□□ -1.12
UBR4-205ENST00000417040 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
UBR4-205ENST00000417040 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
UBR4-205ENST00000417040 RTL8CO15255 209 aa8.04□□□□□ -1.12
UBR4-205ENST00000417040 LINC01600Q96MT4 127 aa8.03□□□□□ -1.12
UBR4-205ENST00000417040 Q8NAQ8 132 aa8.03□□□□□ -1.12
UBR4-205ENST00000417040 H7BZZ5 65 aa8.03□□□□□ -1.12
UBR4-205ENST00000417040 PCSK5Q92824 1860 aa8.03□□□□□ -1.12
UBR4-205ENST00000417040 A0A1B0GW54 56 aa8.03□□□□□ -1.12
UBR4-205ENST00000417040 IGFL1Q6UW32 110 aa8.02□□□□□ -1.13
UBR4-205ENST00000417040 GVQW2A0A096LPI5 108 aaPredicted RBP8.02□□□□□ -1.13
UBR4-205ENST00000417040 DSCR10P59022 87 aa8.02□□□□□ -1.13
UBR4-205ENST00000417040 CENPFP49454 3210 aa8.01□□□□□ -1.13
UBR4-205ENST00000417040 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
UBR4-205ENST00000417040 MRPL34Q9BQ48 92 aaKnown RBP8□□□□□ -1.13
UBR4-205ENST00000417040 ERC2-IT1O76042 136 aa8□□□□□ -1.13
UBR4-205ENST00000417040 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
UBR4-205ENST00000417040 SONP18583 2426 aaKnown RBP8□□□□□ -1.13
UBR4-205ENST00000417040 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
UBR4-205ENST00000417040 Q8N377 158 aa7.98□□□□□ -1.13
UBR4-205ENST00000417040 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
UBR4-205ENST00000417040 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
UBR4-205ENST00000417040 MIR22HGQ0VDD5 57 aa7.97□□□□□ -1.13
UBR4-205ENST00000417040 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
UBR4-205ENST00000417040 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
UBR4-205ENST00000417040 H3BNG1 76 aa7.96□□□□□ -1.13
UBR4-205ENST00000417040 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
UBR4-205ENST00000417040 ACACBO00763 2458 aa7.95□□□□□ -1.14
UBR4-205ENST00000417040 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
UBR4-205ENST00000417040 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
UBR4-205ENST00000417040 UQCR11O14957 56 aa7.94□□□□□ -1.14
UBR4-205ENST00000417040 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
UBR4-205ENST00000417040 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
UBR4-205ENST00000417040 CSNK1G2-AS1Q8NCQ2 148 aa7.93□□□□□ -1.14
UBR4-205ENST00000417040 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
UBR4-205ENST00000417040 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
UBR4-205ENST00000417040 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
UBR4-205ENST00000417040 ATRXP46100 2492 aa7.92□□□□□ -1.14
UBR4-205ENST00000417040 C9orf92A6NGG3 77 aa7.92□□□□□ -1.14
UBR4-205ENST00000417040 CD164Q04900 197 aa7.92□□□□□ -1.14
UBR4-205ENST00000417040 ABCA2Q9BZC7 2435 aa7.91□□□□□ -1.14
UBR4-205ENST00000417040 NAV2Q8IVL1 2488 aa7.9□□□□□ -1.14
UBR4-205ENST00000417040 OBSCN-AS1Q96MR7 158 aa7.89□□□□□ -1.15
UBR4-205ENST00000417040 NOTCH2Q04721 2471 aa7.89□□□□□ -1.15
UBR4-205ENST00000417040 KRTAP24-1Q3LI83 254 aa7.88□□□□□ -1.15
UBR4-205ENST00000417040 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
UBR4-205ENST00000417040 TTC28Q96AY4 2481 aa7.87□□□□□ -1.15
UBR4-205ENST00000417040 KLK9Q2XQG4 91 aa7.87□□□□□ -1.15
UBR4-205ENST00000417040 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
UBR4-205ENST00000417040 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
UBR4-205ENST00000417040 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
UBR4-205ENST00000417040 KRTAP10-11P60412 298 aa7.85□□□□□ -1.15
UBR4-205ENST00000417040 CCDC168Q8NDH2 2452 aa7.84□□□□□ -1.15
UBR4-205ENST00000417040 LCA10Q71F78 164 aa7.84□□□□□ -1.15
UBR4-205ENST00000417040 CASC10Q5T4H9 136 aa7.84□□□□□ -1.15
UBR4-205ENST00000417040 IGF2RP11717 2491 aa7.84□□□□□ -1.16
UBR4-205ENST00000417040 A0A0D9SG42 100 aa7.84□□□□□ -1.16
UBR4-205ENST00000417040 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
UBR4-205ENST00000417040 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
UBR4-205ENST00000417040 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
UBR4-205ENST00000417040 KRTAP10-3P60369 221 aa7.82□□□□□ -1.16
UBR4-205ENST00000417040 PRR34Q9NV39 138 aa7.81□□□□□ -1.16
UBR4-205ENST00000417040 Q8N1X5 172 aa7.81□□□□□ -1.16
UBR4-205ENST00000417040 UTRNP46939 3433 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms