RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LINC01546A6NGU7 62 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 K7EMI3 77 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 HNRNPA3P51991 378 aaKnown RBP3.07□□□□□ -1.92
VPS41-205ENST00000414632 NDUFA6P56556 154 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 RPL18AQ02543 176 aaKnown RBP3.07□□□□□ -1.92
VPS41-205ENST00000414632 C2orf82Q6UX34 121 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 TIMM17AQ99595 171 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 TOMM7Q9P0U1 55 aa3.07□□□□□ -1.92
VPS41-205ENST00000414632 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 HBDP02042 147 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 TRGC2P03986 189 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 SPINK8P0C7L1 97 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 LINC00614P0C842 121 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
VPS41-205ENST00000414632 C9orf116Q5BN46 136 aaPredicted RBP3.06□□□□□ -1.92
VPS41-205ENST00000414632 FLG2Q5D862 2391 aaPredicted RBP3.06□□□□□ -1.92
VPS41-205ENST00000414632 PYY3Q5JQD4 70 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 OR10D4PQ8NGN7 298 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 PRO1933Q9H354 126 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 GEMIN7Q9H840 131 aaKnown RBP3.06□□□□□ -1.92
VPS41-205ENST00000414632 C6orf48Q9UBA6 75 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 CDKN2A-AS1Q9UH64 79 aa3.06□□□□□ -1.92
VPS41-205ENST00000414632 COLCA2A8K830 154 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.05□□□□□ -1.92
VPS41-205ENST00000414632 NDUFA1O15239 70 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
VPS41-205ENST00000414632 HERVK_113P63121 156 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 CIRBPQ14011 172 aaKnown RBP3.05□□□□□ -1.92
VPS41-205ENST00000414632 KIAA0087Q14695 138 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 PMVKQ15126 192 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 FAM19A3Q7Z5A8 133 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 BAGE3Q86Y29 109 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 FAM19A2Q8N3H0 131 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 PACRGQ96M98 296 aaPredicted RBP3.05□□□□□ -1.92
VPS41-205ENST00000414632 CST9LQ9H4G1 147 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 PLAC8Q9NZF1 115 aa3.05□□□□□ -1.92
VPS41-205ENST00000414632 CHTOPQ9Y3Y2 248 aaKnown RBP3.05□□□□□ -1.92
VPS41-205ENST00000414632 TINCRA0A1B0GVN0 87 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 A0A1W2PNN7 141 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 DDTP30046 118 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 RAB5BP61020 215 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 CXCL6P80162 114 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 PDZD11Q5EBL8 140 aa3.04□□□□□ -1.92
VPS41-205ENST00000414632 MRPL35Q9NZE8 188 aaKnown RBP3.04□□□□□ -1.92
VPS41-205ENST00000414632 C11orf86A6NJI1 115 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 DLEU1O43261 78 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 NUPR1O60356 82 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 HSBP1O75506 76 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 SERF1AO75920 110 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 CKS1BP61024 79 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 SEC11AP67812 179 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 PHF5AQ7RTV0 110 aaKnown RBP3.03□□□□□ -1.92
VPS41-205ENST00000414632 FAM19A5Q7Z5A7 132 aaPredicted RBP3.03□□□□□ -1.92
VPS41-205ENST00000414632 KRTAP7-1Q8IUC3 87 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 COX7B2Q8TF08 81 aa3.03□□□□□ -1.92
VPS41-205ENST00000414632 CHCHD1Q96BP2 118 aaKnown RBP3.03□□□□□ -1.92
VPS41-205ENST00000414632 TRBV30A0A0K0K1B3 111 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 LINC01549A6NIU2 74 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 IGLC3P0DOY3 106 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 ZNF22P17026 224 aaPredicted RBP3.02□□□□□ -1.93
VPS41-205ENST00000414632 C9orf129Q5T035 196 aaKnown RBP3.02□□□□□ -1.93
VPS41-205ENST00000414632 TMEM170BQ5T4T1 132 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 Q8IZM0 81 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 C7orf33Q8WU49 177 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 IFI27L1Q96BM0 104 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 SNHG12Q9BXW3 62 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 XAGE1AQ9HD64 81 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 LINC00474Q9P2X8 69 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 PKIGQ9Y2B9 76 aa3.02□□□□□ -1.93
VPS41-205ENST00000414632 DMBT1Q9UGM3 2413 aaPredicted RBP3.02□□□□□ -1.93
VPS41-205ENST00000414632 NDUFC2-KCTD14E9PQ53 114 aa3.01□□□□□ -1.93
VPS41-205ENST00000414632 F8VRH5 84 aa3.01□□□□□ -1.93
VPS41-205ENST00000414632 H3BRM9 83 aa3.01□□□□□ -1.93
VPS41-205ENST00000414632 TLX1NBP0CAT3 122 aa3.01□□□□□ -1.93
VPS41-205ENST00000414632 FABP4P15090 132 aa3.01□□□□□ -1.93
VPS41-205ENST00000414632 PRR3P79522 188 aaKnown RBP3.01□□□□□ -1.93
VPS41-205ENST00000414632 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
VPS41-205ENST00000414632 KRTAP11-1Q8IUC1 163 aa3.01□□□□□ -1.93
VPS41-205ENST00000414632 ZNF625Q96I27 306 aaPredicted RBP3.01□□□□□ -1.93
VPS41-205ENST00000414632 M0QXV9 152 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BKO60814 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 LEPROTL1O95214 131 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BJP06899 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BOP23527 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BBP33778 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 PFN2P35080 140 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BDP58876 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BCP62807 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST2H2BEQ16778 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST2H2BFQ5QNW6 126 aaPredicted RBP3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BHQ93079 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BNQ99877 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 HIST1H2BMQ99879 126 aa3□□□□□ -1.93
VPS41-205ENST00000414632 PMCHL2Q9BQD1 86 aa3□□□□□ -1.93
VPS41-205ENST00000414632 PSORS1C2Q9UIG4 136 aa3□□□□□ -1.93
VPS41-205ENST00000414632 TNXBP22105 4242 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms