RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 TMEM126AQ9H061 195 aa16.35■□□□□ 0.21
VRK2-202ENST00000412104 CAMK2N2Q96S95 79 aa16.34■□□□□ 0.21
VRK2-202ENST00000412104 IGKV2D-24A0A075B6R9 120 aa16.33■□□□□ 0.21
VRK2-202ENST00000412104 LINC00588Q9Y4M8 146 aa16.33■□□□□ 0.21
VRK2-202ENST00000412104 DNAL4O96015 105 aa16.32■□□□□ 0.2
VRK2-202ENST00000412104 HUWE1Q7Z6Z7 4374 aaKnown RBP16.31■□□□□ 0.2
VRK2-202ENST00000412104 MDFIQ99750 246 aa16.31■□□□□ 0.2
VRK2-202ENST00000412104 C22orf24Q9Y442 160 aa16.31■□□□□ 0.2
VRK2-202ENST00000412104 LECT2O14960 151 aa16.3■□□□□ 0.2
VRK2-202ENST00000412104 XGP55808 180 aa16.29■□□□□ 0.2
VRK2-202ENST00000412104 S100A7L2Q5SY68 101 aa16.28■□□□□ 0.2
VRK2-202ENST00000412104 Q6ZRU5 148 aa16.28■□□□□ 0.2
VRK2-202ENST00000412104 C2orf48Q96LS8 159 aa16.28■□□□□ 0.2
VRK2-202ENST00000412104 MGAM2Q2M2H8 2515 aa16.27■□□□□ 0.19
VRK2-202ENST00000412104 XAGE1AQ9HD64 81 aa16.27■□□□□ 0.19
VRK2-202ENST00000412104 MT-ATP8P03928 68 aa16.25■□□□□ 0.19
VRK2-202ENST00000412104 RPL18AQ02543 176 aaKnown RBP16.24■□□□□ 0.19
VRK2-202ENST00000412104 C6orf99Q4VX62 202 aa16.22■□□□□ 0.19
VRK2-202ENST00000412104 IGLV6-57P01721 117 aa16.21■□□□□ 0.19
VRK2-202ENST00000412104 FAM240AA0A1B0GVK7 77 aa16.21■□□□□ 0.19
VRK2-202ENST00000412104 SCGB1A1P11684 91 aa16.21■□□□□ 0.19
VRK2-202ENST00000412104 F8WDY8 70 aa16.2■□□□□ 0.18
VRK2-202ENST00000412104 SLPIP03973 132 aa16.2■□□□□ 0.18
VRK2-202ENST00000412104 A0A1B0GX51 115 aa16.19■□□□□ 0.18
VRK2-202ENST00000412104 NDUFC2-KCTD14E9PQ53 114 aa16.19■□□□□ 0.18
VRK2-202ENST00000412104 LINC00167Q96N53 147 aa16.18■□□□□ 0.18
VRK2-202ENST00000412104 UPK3BQ9BT76 320 aa16.18■□□□□ 0.18
VRK2-202ENST00000412104 Q8N814 137 aa16.17■□□□□ 0.18
VRK2-202ENST00000412104 SYCNQ0VAF6 134 aa16.17■□□□□ 0.18
VRK2-202ENST00000412104 ORMDL1Q9P0S3 153 aa16.17■□□□□ 0.18
VRK2-202ENST00000412104 TRBV10-3A0A0K0K1G6 114 aa16.15■□□□□ 0.18
VRK2-202ENST00000412104 INAFM2P0DMQ5 153 aa16.15■□□□□ 0.18
VRK2-202ENST00000412104 VPREB1P12018 145 aa16.14■□□□□ 0.17
VRK2-202ENST00000412104 GAGE2EQ4V326 116 aa16.13■□□□□ 0.17
VRK2-202ENST00000412104 C9orf129Q5T035 196 aaKnown RBP16.13■□□□□ 0.17
VRK2-202ENST00000412104 GAGE2DQ9UEU5 116 aa16.13■□□□□ 0.17
VRK2-202ENST00000412104 CASC10Q5T4H9 136 aa16.12■□□□□ 0.17
VRK2-202ENST00000412104 Q6ZRP5 223 aa16.12■□□□□ 0.17
VRK2-202ENST00000412104 LINC00575Q6W349 94 aa16.11■□□□□ 0.17
VRK2-202ENST00000412104 RMI2Q96E14 147 aa16.11■□□□□ 0.17
VRK2-202ENST00000412104 TRAV23DV6A0A075B6W5 121 aa16.1■□□□□ 0.17
VRK2-202ENST00000412104 OBSCN-AS1Q96MR7 158 aa16.1■□□□□ 0.17
VRK2-202ENST00000412104 B9D2Q9BPU9 175 aa16.1■□□□□ 0.17
VRK2-202ENST00000412104 USP17L23D6RBM5 183 aa16.09■□□□□ 0.17
VRK2-202ENST00000412104 ACYP1P07311 99 aa16.09■□□□□ 0.17
VRK2-202ENST00000412104 SNCGO76070 127 aa16.08■□□□□ 0.16
VRK2-202ENST00000412104 M0R378 163 aa16.06■□□□□ 0.16
VRK2-202ENST00000412104 DIRC1Q969H9 104 aa16.06■□□□□ 0.16
VRK2-202ENST00000412104 COL7A1Q02388 2944 aa16.06■□□□□ 0.16
VRK2-202ENST00000412104 C14orf132Q9NPU4 83 aa16.06■□□□□ 0.16
VRK2-202ENST00000412104 hADV29S1A0JD25 119 aa16.04■□□□□ 0.16
VRK2-202ENST00000412104 TTC32Q5I0X7 151 aa16.04■□□□□ 0.16
VRK2-202ENST00000412104 DNAH1Q9P2D7 4330 aa16.04■□□□□ 0.16
VRK2-202ENST00000412104 ZNF73O43830 326 aaPredicted RBP16.04■□□□□ 0.16
VRK2-202ENST00000412104 GAGE2AQ6NT46 116 aa16.04■□□□□ 0.16
VRK2-202ENST00000412104 DNAH9Q9NYC9 4486 aa16.03■□□□□ 0.16
VRK2-202ENST00000412104 TMEM256-PLSCR3K7ERE1 68 aa16.03■□□□□ 0.16
VRK2-202ENST00000412104 STAB2Q8WWQ8 2551 aa16.02■□□□□ 0.16
VRK2-202ENST00000412104 TLX1NBP0CAT3 122 aa16.02■□□□□ 0.15
VRK2-202ENST00000412104 APLNQ9ULZ1 77 aa16■□□□□ 0.15
VRK2-202ENST00000412104 A0A1B0GV72 72 aa15.99■□□□□ 0.15
VRK2-202ENST00000412104 KRTAP1-5Q9BYS1 174 aa15.98■□□□□ 0.15
VRK2-202ENST00000412104 SMCR5Q8TEV8 140 aa15.98■□□□□ 0.15
VRK2-202ENST00000412104 COX7BP24311 80 aa15.97■□□□□ 0.15
VRK2-202ENST00000412104 ELOF1P60002 83 aaKnown RBP15.97■□□□□ 0.15
VRK2-202ENST00000412104 TRBV7-6A0A0J9YX20 115 aa15.96■□□□□ 0.15
VRK2-202ENST00000412104 UBE2DNLQ8IWF7 75 aa15.96■□□□□ 0.15
VRK2-202ENST00000412104 SERTAD4-AS1Q5TG53 156 aa15.96■□□□□ 0.14
VRK2-202ENST00000412104 SDIM1Q6ZPB5 146 aa15.96■□□□□ 0.14
VRK2-202ENST00000412104 JMJD7-PLA2G4BH0Y9G9 81 aa15.95■□□□□ 0.14
VRK2-202ENST00000412104 GAGE2BQ13066 116 aa15.95■□□□□ 0.14
VRK2-202ENST00000412104 Q6ZQY7 126 aa15.94■□□□□ 0.14
VRK2-202ENST00000412104 NKAPP1Q8N9T2 125 aa15.94■□□□□ 0.14
VRK2-202ENST00000412104 Q6Q795 121 aa15.92■□□□□ 0.14
VRK2-202ENST00000412104 PLA2G2DQ9UNK4 145 aa15.92■□□□□ 0.14
VRK2-202ENST00000412104 LINC00643Q86TS7 51 aa15.9■□□□□ 0.14
VRK2-202ENST00000412104 C7orf33Q8WU49 177 aa15.9■□□□□ 0.14
VRK2-202ENST00000412104 LYSTQ99698 3801 aa15.88■□□□□ 0.13
VRK2-202ENST00000412104 NHLRC4P0CG21 123 aaPredicted RBP15.88■□□□□ 0.13
VRK2-202ENST00000412104 TRBV7-7A0A0K0K1E9 115 aa15.87■□□□□ 0.13
VRK2-202ENST00000412104 CCKP06307 115 aa15.87■□□□□ 0.13
VRK2-202ENST00000412104 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.87■□□□□ 0.13
VRK2-202ENST00000412104 LINC00528Q8N1L1 170 aa15.87■□□□□ 0.13
VRK2-202ENST00000412104 FAM168BA1KXE4 195 aa15.86■□□□□ 0.13
VRK2-202ENST00000412104 KCNQ1DNQ9H478 68 aa15.86■□□□□ 0.13
VRK2-202ENST00000412104 IGLV5-37A0A075B6J1 123 aa15.85■□□□□ 0.13
VRK2-202ENST00000412104 LOC107984640A0A0U1RRK4 108 aa15.85■□□□□ 0.13
VRK2-202ENST00000412104 H3BQ85 93 aa15.85■□□□□ 0.13
VRK2-202ENST00000412104 DYNC2H1Q8NCM8 4307 aaKnown RBP15.85■□□□□ 0.13
VRK2-202ENST00000412104 NUPR2A6NF83 97 aa15.84■□□□□ 0.13
VRK2-202ENST00000412104 LAMTOR3Q9UHA4 124 aa15.84■□□□□ 0.13
VRK2-202ENST00000412104 PSCAO43653 123 aa15.83■□□□□ 0.12
VRK2-202ENST00000412104 LINC00846Q9NV44 126 aa15.83■□□□□ 0.12
VRK2-202ENST00000412104 KRTAP7-1Q8IUC3 87 aa15.82■□□□□ 0.12
VRK2-202ENST00000412104 RBM3P98179 157 aaKnown RBP15.81■□□□□ 0.12
VRK2-202ENST00000412104 CSMD3Q7Z407 3707 aa15.79■□□□□ 0.12
VRK2-202ENST00000412104 RPL37AP8A6NKH3 93 aa15.77■□□□□ 0.12
VRK2-202ENST00000412104 GHRHP01286 108 aa15.77■□□□□ 0.12
VRK2-202ENST00000412104 CNBPP62633 177 aaKnown RBP15.77■□□□□ 0.12
VRK2-202ENST00000412104 FAM19A5Q7Z5A7 132 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms