RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
SCAMP4-203ENST00000411971 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.9
SCAMP4-203ENST00000411971 A0A0U1RRA0 63 aa9.46□□□□□ -0.9
SCAMP4-203ENST00000411971 COX17Q14061 63 aa9.46□□□□□ -0.9
SCAMP4-203ENST00000411971 RHEBQ15382 184 aa9.46□□□□□ -0.9
SCAMP4-203ENST00000411971 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
SCAMP4-203ENST00000411971 KRTAP9-2Q9BYQ4 174 aa9.46□□□□□ -0.9
SCAMP4-203ENST00000411971 RPL24P83731 157 aaKnown RBP9.44□□□□□ -0.9
SCAMP4-203ENST00000411971 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
SCAMP4-203ENST00000411971 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
SCAMP4-203ENST00000411971 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
SCAMP4-203ENST00000411971 HIGD2AQ9BW72 106 aa9.43□□□□□ -0.9
SCAMP4-203ENST00000411971 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
SCAMP4-203ENST00000411971 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
SCAMP4-203ENST00000411971 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
SCAMP4-203ENST00000411971 LINC00158P58513 81 aa9.41□□□□□ -0.9
SCAMP4-203ENST00000411971 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
SCAMP4-203ENST00000411971 YPEL4Q96NS1 127 aa9.4□□□□□ -0.9
SCAMP4-203ENST00000411971 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
SCAMP4-203ENST00000411971 CDIP1Q9H305 208 aa9.39□□□□□ -0.91
SCAMP4-203ENST00000411971 KRTAP4-16G5E9R7 235 aaPredicted RBP9.38□□□□□ -0.91
SCAMP4-203ENST00000411971 DAND5Q8N907 189 aa9.38□□□□□ -0.91
SCAMP4-203ENST00000411971 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
SCAMP4-203ENST00000411971 NCR3O14931 201 aa9.37□□□□□ -0.91
SCAMP4-203ENST00000411971 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
SCAMP4-203ENST00000411971 APOC3P02656 99 aa9.36□□□□□ -0.91
SCAMP4-203ENST00000411971 SPRR1AP35321 89 aa9.36□□□□□ -0.91
SCAMP4-203ENST00000411971 SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
SCAMP4-203ENST00000411971 BOD1L2Q8IYS8 172 aa9.35□□□□□ -0.91
SCAMP4-203ENST00000411971 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
SCAMP4-203ENST00000411971 IFI27L1Q96BM0 104 aa9.35□□□□□ -0.91
SCAMP4-203ENST00000411971 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
SCAMP4-203ENST00000411971 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
SCAMP4-203ENST00000411971 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
SCAMP4-203ENST00000411971 TRBV10-3A0A0K0K1G6 114 aa9.33□□□□□ -0.92
SCAMP4-203ENST00000411971 PRYO14603 147 aa9.33□□□□□ -0.92
SCAMP4-203ENST00000411971 CTAG1AP78358 180 aa9.33□□□□□ -0.92
SCAMP4-203ENST00000411971 Q8NBF4 154 aa9.33□□□□□ -0.92
SCAMP4-203ENST00000411971 KRTAP4-1Q9BYQ7 146 aa9.33□□□□□ -0.92
SCAMP4-203ENST00000411971 KCNQ1DNQ9H478 68 aa9.33□□□□□ -0.92
SCAMP4-203ENST00000411971 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
SCAMP4-203ENST00000411971 LINC00310P59036 64 aa9.31□□□□□ -0.92
SCAMP4-203ENST00000411971 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
SCAMP4-203ENST00000411971 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
SCAMP4-203ENST00000411971 LINC00337Q8N6G1 96 aa9.31□□□□□ -0.92
SCAMP4-203ENST00000411971 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
SCAMP4-203ENST00000411971 NDUFA12Q9UI09 145 aa9.3□□□□□ -0.92
SCAMP4-203ENST00000411971 SPAG11AQ6PDA7 123 aa9.29□□□□□ -0.92
SCAMP4-203ENST00000411971 SNAPINO95295 136 aa9.28□□□□□ -0.92
SCAMP4-203ENST00000411971 LINC00483Q53H64 154 aa9.28□□□□□ -0.92
SCAMP4-203ENST00000411971 B5MCH6 92 aa9.27□□□□□ -0.93
SCAMP4-203ENST00000411971 H0Y8G0 127 aa9.27□□□□□ -0.93
SCAMP4-203ENST00000411971 SVBPQ8N300 66 aa9.27□□□□□ -0.93
SCAMP4-203ENST00000411971 Q9BRP9 147 aa9.27□□□□□ -0.93
SCAMP4-203ENST00000411971 ZNF706Q9Y5V0 76 aaPredicted RBP9.27□□□□□ -0.93
SCAMP4-203ENST00000411971 ETDCA0A1B0GVM5 59 aa9.26□□□□□ -0.93
SCAMP4-203ENST00000411971 ATP6V1G1O75348 118 aa9.26□□□□□ -0.93
SCAMP4-203ENST00000411971 HERV-K104P63124 156 aa9.26□□□□□ -0.93
SCAMP4-203ENST00000411971 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
SCAMP4-203ENST00000411971 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
SCAMP4-203ENST00000411971 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
SCAMP4-203ENST00000411971 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
SCAMP4-203ENST00000411971 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
SCAMP4-203ENST00000411971 MYMXA0A1B0GTQ4 84 aa9.23□□□□□ -0.93
SCAMP4-203ENST00000411971 HSBP1O75506 76 aa9.23□□□□□ -0.93
SCAMP4-203ENST00000411971 MOBPQ13875 183 aa9.23□□□□□ -0.93
SCAMP4-203ENST00000411971 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
SCAMP4-203ENST00000411971 PMCHL2Q9BQD1 86 aa9.23□□□□□ -0.93
SCAMP4-203ENST00000411971 IGLV9-49A0A0B4J1Y8 123 aa9.22□□□□□ -0.93
SCAMP4-203ENST00000411971 LEPROTO15243 131 aa9.22□□□□□ -0.93
SCAMP4-203ENST00000411971 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
SCAMP4-203ENST00000411971 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
SCAMP4-203ENST00000411971 SERF1AO75920 110 aa9.21□□□□□ -0.94
SCAMP4-203ENST00000411971 SPINK1P00995 79 aa9.21□□□□□ -0.94
SCAMP4-203ENST00000411971 TRGC2P03986 189 aa9.21□□□□□ -0.94
SCAMP4-203ENST00000411971 DDTP30046 118 aa9.21□□□□□ -0.94
SCAMP4-203ENST00000411971 Q8N377 158 aa9.21□□□□□ -0.94
SCAMP4-203ENST00000411971 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
SCAMP4-203ENST00000411971 Q6ZRX8 168 aa9.19□□□□□ -0.94
SCAMP4-203ENST00000411971 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
SCAMP4-203ENST00000411971 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
SCAMP4-203ENST00000411971 J3QQQ9 107 aa9.18□□□□□ -0.94
SCAMP4-203ENST00000411971 LEPROTL1O95214 131 aa9.18□□□□□ -0.94
SCAMP4-203ENST00000411971 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
SCAMP4-203ENST00000411971 IGLV6-57P01721 117 aa9.17□□□□□ -0.94
SCAMP4-203ENST00000411971 NPC2P61916 151 aa9.17□□□□□ -0.94
SCAMP4-203ENST00000411971 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
SCAMP4-203ENST00000411971 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
SCAMP4-203ENST00000411971 FABP4P15090 132 aa9.16□□□□□ -0.94
SCAMP4-203ENST00000411971 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
SCAMP4-203ENST00000411971 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
SCAMP4-203ENST00000411971 SPANXB1Q9NS25 103 aaPredicted RBP9.15□□□□□ -0.94
SCAMP4-203ENST00000411971 DPM2O94777 84 aa9.13□□□□□ -0.95
SCAMP4-203ENST00000411971 PLNP26678 52 aa9.13□□□□□ -0.95
SCAMP4-203ENST00000411971 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
SCAMP4-203ENST00000411971 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
SCAMP4-203ENST00000411971 NDUFC2O95298 119 aa9.12□□□□□ -0.95
SCAMP4-203ENST00000411971 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
SCAMP4-203ENST00000411971 IGKCP01834 107 aa9.11□□□□□ -0.95
SCAMP4-203ENST00000411971 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms