RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 ZNF469Q96JG9 3925 aaPredicted RBP6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 ANGP03950 147 aaKnown RBP6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 KRTAP10-9P60411 292 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 IGHV4-31P0DP07 118 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 C6orf223Q8N319 242 aa6.8□□□□□ -1.32
PTCHD4-202ENST00000398738 Q6ZQY7 126 aa6.78□□□□□ -1.32
PTCHD4-202ENST00000398738 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
PTCHD4-202ENST00000398738 ITPR3Q14573 2671 aa6.78□□□□□ -1.32
PTCHD4-202ENST00000398738 J3QLI3 93 aa6.78□□□□□ -1.32
PTCHD4-202ENST00000398738 TRAV25A0A0B4J276 109 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 DSCR9P59020 149 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 NDUFC2O95298 119 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 LY6G6DO95868 133 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 HTN3P15516 51 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 UNQ6190/PRO20217Q6UXQ8 127 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 CR1P17927 2039 aa6.77□□□□□ -1.33
PTCHD4-202ENST00000398738 F8WEM9 126 aa6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 LINC01006Q8NI28 216 aa6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 CHCHD10Q8WYQ3 142 aaPredicted RBP6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 Q6ZVQ6 151 aa6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 Q8IZM0 81 aa6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 Q8N9L7 120 aa6.76□□□□□ -1.33
PTCHD4-202ENST00000398738 H7BZZ5 65 aa6.75□□□□□ -1.33
PTCHD4-202ENST00000398738 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 LINC00336Q6ZUF6 198 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 PKIGQ9Y2B9 76 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 Q6ZQT0 140 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 DAD1P61803 113 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 TM2D3Q9BRN9 247 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
PTCHD4-202ENST00000398738 REG3AQ06141 175 aa6.73□□□□□ -1.33
PTCHD4-202ENST00000398738 F8P00451 2351 aa6.73□□□□□ -1.33
PTCHD4-202ENST00000398738 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
PTCHD4-202ENST00000398738 TRAV7A0A075B6U4 112 aa6.72□□□□□ -1.33
PTCHD4-202ENST00000398738 KIAA0087Q14695 138 aa6.72□□□□□ -1.33
PTCHD4-202ENST00000398738 SPAG11BQ08648 103 aa6.72□□□□□ -1.33
PTCHD4-202ENST00000398738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.72□□□□□ -1.33
PTCHD4-202ENST00000398738 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
PTCHD4-202ENST00000398738 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.33
PTCHD4-202ENST00000398738 CSNK1G2-AS1Q8NCQ2 148 aa6.71□□□□□ -1.33
PTCHD4-202ENST00000398738 UNC79Q9P2D8 2635 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 A0A0U1RQV1 116 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 FSHBP01225 129 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 TRBV10-3A0A0K0K1G6 114 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 PRYO14603 147 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
PTCHD4-202ENST00000398738 CYSRT1A8MQ03 144 aa6.7□□□□□ -1.34
PTCHD4-202ENST00000398738 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
PTCHD4-202ENST00000398738 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
PTCHD4-202ENST00000398738 VWFP04275 2813 aa6.69□□□□□ -1.34
PTCHD4-202ENST00000398738 SERP1Q9Y6X1 66 aa6.69□□□□□ -1.34
PTCHD4-202ENST00000398738 XP32Q5T750 250 aa6.69□□□□□ -1.34
PTCHD4-202ENST00000398738 MUC7Q8TAX7 377 aa6.69□□□□□ -1.34
PTCHD4-202ENST00000398738 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
PTCHD4-202ENST00000398738 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
PTCHD4-202ENST00000398738 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
PTCHD4-202ENST00000398738 HIGD2BQ4VC39 106 aa6.68□□□□□ -1.34
PTCHD4-202ENST00000398738 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
PTCHD4-202ENST00000398738 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
PTCHD4-202ENST00000398738 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
PTCHD4-202ENST00000398738 IGHV4-28A0A0C4DH34 117 aa6.67□□□□□ -1.34
PTCHD4-202ENST00000398738 C3orf84H3BNL1 204 aa6.67□□□□□ -1.34
PTCHD4-202ENST00000398738 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
PTCHD4-202ENST00000398738 TRBV7-6A0A0J9YX20 115 aa6.66□□□□□ -1.34
PTCHD4-202ENST00000398738 LRCOL1A6NCL2 159 aa6.66□□□□□ -1.34
PTCHD4-202ENST00000398738 IGLV1-51P01701 117 aa6.66□□□□□ -1.34
PTCHD4-202ENST00000398738 COX17Q14061 63 aa6.66□□□□□ -1.34
PTCHD4-202ENST00000398738 DIRC1Q969H9 104 aa6.66□□□□□ -1.34
PTCHD4-202ENST00000398738 BPY2O14599 106 aa6.65□□□□□ -1.34
PTCHD4-202ENST00000398738 PRB2P02812 416 aaPredicted RBP6.65□□□□□ -1.34
PTCHD4-202ENST00000398738 MIFP14174 115 aa6.65□□□□□ -1.34
PTCHD4-202ENST00000398738 NREPQ16612 68 aa6.65□□□□□ -1.34
PTCHD4-202ENST00000398738 DEFB113Q30KQ7 82 aa6.65□□□□□ -1.34
PTCHD4-202ENST00000398738 MRAPQ8TCY5 172 aa6.65□□□□□ -1.34
PTCHD4-202ENST00000398738 LOC110117498A0A087WWA1 95 aa6.64□□□□□ -1.35
PTCHD4-202ENST00000398738 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
PTCHD4-202ENST00000398738 HELZ2Q9BYK8 2649 aaKnown RBP6.64□□□□□ -1.35
PTCHD4-202ENST00000398738 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
PTCHD4-202ENST00000398738 ZNF73O43830 326 aaPredicted RBP6.63□□□□□ -1.35
PTCHD4-202ENST00000398738 COX7BP24311 80 aa6.63□□□□□ -1.35
PTCHD4-202ENST00000398738 CELA1Q9UNI1 258 aa6.63□□□□□ -1.35
PTCHD4-202ENST00000398738 CMC4P56277 68 aaPredicted RBP6.63□□□□□ -1.35
PTCHD4-202ENST00000398738 TMEM254Q8TBM7 123 aa6.63□□□□□ -1.35
PTCHD4-202ENST00000398738 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
PTCHD4-202ENST00000398738 FAM229BQ4G0N7 80 aa6.62□□□□□ -1.35
PTCHD4-202ENST00000398738 TEP1Q99973 2627 aaKnown RBP6.62□□□□□ -1.35
PTCHD4-202ENST00000398738 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 C6orf48Q9UBA6 75 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 ITPR2Q14571 2701 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 CXCL6P80162 114 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
PTCHD4-202ENST00000398738 ATRQ13535 2644 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms