RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 IGKV2-28A0A075B6P5 120 aa12.96□□□□□ -0.33
PDLIM2-204ENST00000397760 H0YGX0 51 aa12.96□□□□□ -0.33
PDLIM2-204ENST00000397760 IGKV2D-28P01615 120 aa12.96□□□□□ -0.33
PDLIM2-204ENST00000397760 Q8IZM0 81 aa12.96□□□□□ -0.33
PDLIM2-204ENST00000397760 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
PDLIM2-204ENST00000397760 TGP01266 2768 aa12.95□□□□□ -0.34
PDLIM2-204ENST00000397760 BAALC-AS2P0C853 105 aa12.94□□□□□ -0.34
PDLIM2-204ENST00000397760 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
PDLIM2-204ENST00000397760 ANAPC13Q9BS18 74 aa12.92□□□□□ -0.34
PDLIM2-204ENST00000397760 INAFM2P0DMQ5 153 aa12.92□□□□□ -0.34
PDLIM2-204ENST00000397760 FAM218AQ96MZ4 157 aa12.91□□□□□ -0.34
PDLIM2-204ENST00000397760 Q9HAA7 133 aa12.91□□□□□ -0.34
PDLIM2-204ENST00000397760 CXCL5P42830 114 aa12.9□□□□□ -0.34
PDLIM2-204ENST00000397760 CASC10Q5T4H9 136 aa12.9□□□□□ -0.34
PDLIM2-204ENST00000397760 C1orf43Q9BWL3 253 aa12.9□□□□□ -0.34
PDLIM2-204ENST00000397760 SMIM11BQ8TCY0 68 aa12.9□□□□□ -0.34
PDLIM2-204ENST00000397760 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
PDLIM2-204ENST00000397760 TTC32Q5I0X7 151 aa12.89□□□□□ -0.35
PDLIM2-204ENST00000397760 TRBV7-7A0A0K0K1E9 115 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 C3orf84H3BNL1 204 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 MALP21145 153 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 NDUFV3P56181 108 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 COX17Q14061 63 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 KRTAP26-1Q6PEX3 210 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 LYSTQ99698 3801 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 IMUPQ9GZP8 106 aa12.88□□□□□ -0.35
PDLIM2-204ENST00000397760 DNAL4O96015 105 aa12.87□□□□□ -0.35
PDLIM2-204ENST00000397760 PFN2P35080 140 aa12.87□□□□□ -0.35
PDLIM2-204ENST00000397760 KRTAP1-5Q9BYS1 174 aa12.87□□□□□ -0.35
PDLIM2-204ENST00000397760 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
PDLIM2-204ENST00000397760 SDIM1Q6ZPB5 146 aa12.86□□□□□ -0.35
PDLIM2-204ENST00000397760 DNAH1Q9P2D7 4330 aa12.86□□□□□ -0.35
PDLIM2-204ENST00000397760 VPS13DQ5THJ4 4388 aa12.85□□□□□ -0.35
PDLIM2-204ENST00000397760 NDUFC2O95298 119 aa12.85□□□□□ -0.35
PDLIM2-204ENST00000397760 TENM2Q9NT68 2774 aa12.85□□□□□ -0.35
PDLIM2-204ENST00000397760 RMI2Q96E14 147 aa12.84□□□□□ -0.35
PDLIM2-204ENST00000397760 NBDYA0A0U1RRE5 68 aa12.83□□□□□ -0.35
PDLIM2-204ENST00000397760 LINC00643Q86TS7 51 aa12.83□□□□□ -0.35
PDLIM2-204ENST00000397760 A0A1B0GX51 115 aa12.83□□□□□ -0.36
PDLIM2-204ENST00000397760 KIAA0087Q14695 138 aa12.82□□□□□ -0.36
PDLIM2-204ENST00000397760 CFAP161Q6P656 301 aa12.81□□□□□ -0.36
PDLIM2-204ENST00000397760 OBSCN-AS1Q96MR7 158 aa12.81□□□□□ -0.36
PDLIM2-204ENST00000397760 A0A087WYN8 130 aa12.8□□□□□ -0.36
PDLIM2-204ENST00000397760 OR13C6PQ8NH95 151 aa12.79□□□□□ -0.36
PDLIM2-204ENST00000397760 LY6G6CO95867 125 aa12.78□□□□□ -0.36
PDLIM2-204ENST00000397760 SPAG11BQ08648 103 aa12.77□□□□□ -0.37
PDLIM2-204ENST00000397760 M0R2N4 97 aa12.76□□□□□ -0.37
PDLIM2-204ENST00000397760 LINC00476Q8WZB0 136 aa12.76□□□□□ -0.37
PDLIM2-204ENST00000397760 LINC00167Q96N53 147 aa12.76□□□□□ -0.37
PDLIM2-204ENST00000397760 TMEM126AQ9H061 195 aa12.76□□□□□ -0.37
PDLIM2-204ENST00000397760 LECT2O14960 151 aa12.75□□□□□ -0.37
PDLIM2-204ENST00000397760 C15orf56Q8N910 161 aa12.75□□□□□ -0.37
PDLIM2-204ENST00000397760 HIGD2BQ4VC39 106 aa12.74□□□□□ -0.37
PDLIM2-204ENST00000397760 LINC00526Q96FQ7 95 aa12.74□□□□□ -0.37
PDLIM2-204ENST00000397760 ORMDL1Q9P0S3 153 aa12.74□□□□□ -0.37
PDLIM2-204ENST00000397760 C6orf223Q8N319 242 aa12.73□□□□□ -0.37
PDLIM2-204ENST00000397760 SMCR5Q8TEV8 140 aa12.73□□□□□ -0.37
PDLIM2-204ENST00000397760 ZNF561-AS1K7EIQ3 104 aa12.72□□□□□ -0.37
PDLIM2-204ENST00000397760 PSCAO43653 123 aa12.72□□□□□ -0.37
PDLIM2-204ENST00000397760 GAGE2AQ6NT46 116 aa12.72□□□□□ -0.37
PDLIM2-204ENST00000397760 USP17L23D6RBM5 183 aa12.71□□□□□ -0.38
PDLIM2-204ENST00000397760 Q6ZR54 194 aa12.71□□□□□ -0.38
PDLIM2-204ENST00000397760 GVQW2A0A096LPI5 108 aaPredicted RBP12.69□□□□□ -0.38
PDLIM2-204ENST00000397760 ALMS1Q8TCU4 4167 aa12.69□□□□□ -0.38
PDLIM2-204ENST00000397760 UNQ6190/PRO20217Q6UXQ8 127 aa12.68□□□□□ -0.38
PDLIM2-204ENST00000397760 JMJD7-PLA2G4BH0Y9G9 81 aa12.67□□□□□ -0.38
PDLIM2-204ENST00000397760 C10orf25Q5T742 122 aa12.67□□□□□ -0.38
PDLIM2-204ENST00000397760 Q8N814 137 aa12.67□□□□□ -0.38
PDLIM2-204ENST00000397760 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
PDLIM2-204ENST00000397760 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
PDLIM2-204ENST00000397760 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
PDLIM2-204ENST00000397760 Q6ZRN7 208 aaPredicted RBP12.66□□□□□ -0.38
PDLIM2-204ENST00000397760 C14orf132Q9NPU4 83 aa12.65□□□□□ -0.38
PDLIM2-204ENST00000397760 DNAH10Q8IVF4 4471 aa12.65□□□□□ -0.39
PDLIM2-204ENST00000397760 KMT2AQ03164 3969 aa12.64□□□□□ -0.39
PDLIM2-204ENST00000397760 F8WDY8 70 aa12.63□□□□□ -0.39
PDLIM2-204ENST00000397760 C9orf129Q5T035 196 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-204ENST00000397760 FAM236AA0A1B0GUQ0 79 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 FAM236BA0A1B0GV22 79 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 CCDC179H3BU77 68 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 C9orf116Q5BN46 136 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 DNAH6Q9C0G6 4158 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 B5MCH6 92 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 Q6JHZ5 121 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 Q6ZRU5 148 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 C6orf48Q9UBA6 75 aa12.62□□□□□ -0.39
PDLIM2-204ENST00000397760 PRR3P79522 188 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-204ENST00000397760 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
PDLIM2-204ENST00000397760 C1orf134Q5TEV5 83 aa12.61□□□□□ -0.39
PDLIM2-204ENST00000397760 H3BQ85 93 aa12.6□□□□□ -0.39
PDLIM2-204ENST00000397760 SLPIP03973 132 aa12.6□□□□□ -0.39
PDLIM2-204ENST00000397760 CCKP06307 115 aa12.6□□□□□ -0.39
PDLIM2-204ENST00000397760 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
PDLIM2-204ENST00000397760 NCR3O14931 201 aa12.6□□□□□ -0.39
PDLIM2-204ENST00000397760 LRCOL1A6NCL2 159 aa12.59□□□□□ -0.39
PDLIM2-204ENST00000397760 C6orf99Q4VX62 202 aa12.58□□□□□ -0.4
PDLIM2-204ENST00000397760 C14orf177Q52M58 125 aa12.58□□□□□ -0.4
PDLIM2-204ENST00000397760 LINC00575Q6W349 94 aa12.58□□□□□ -0.4
PDLIM2-204ENST00000397760 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
PDLIM2-204ENST00000397760 LINC00846Q9NV44 126 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms