RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 UBR5O95071 2799 aaPredicted RBP10.63□□□□□ -0.71
LSS-202ENST00000397728 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
LSS-202ENST00000397728 CCKP06307 115 aa10.62□□□□□ -0.71
LSS-202ENST00000397728 REG3GQ6UW15 175 aa10.62□□□□□ -0.71
LSS-202ENST00000397728 C2orf91Q6ZV80 131 aa10.62□□□□□ -0.71
LSS-202ENST00000397728 BPY2O14599 106 aa10.61□□□□□ -0.71
LSS-202ENST00000397728 F8WDY8 70 aa10.61□□□□□ -0.71
LSS-202ENST00000397728 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
LSS-202ENST00000397728 MRPL55Q7Z7F7 128 aaKnown RBP10.6□□□□□ -0.71
LSS-202ENST00000397728 ATP5EP56381 51 aaPredicted RBP10.6□□□□□ -0.71
LSS-202ENST00000397728 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
LSS-202ENST00000397728 DMXL2Q8TDJ6 3036 aa10.59□□□□□ -0.71
LSS-202ENST00000397728 ADAMTSL4-AS1Q5T5F5 129 aa10.59□□□□□ -0.71
LSS-202ENST00000397728 C3orf84H3BNL1 204 aa10.59□□□□□ -0.71
LSS-202ENST00000397728 FRYQ5TBA9 3013 aa10.58□□□□□ -0.72
LSS-202ENST00000397728 ATMQ13315 3056 aa10.58□□□□□ -0.72
LSS-202ENST00000397728 CELSR3Q9NYQ7 3312 aa10.58□□□□□ -0.72
LSS-202ENST00000397728 LINC01561Q8N1V8 128 aa10.57□□□□□ -0.72
LSS-202ENST00000397728 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
LSS-202ENST00000397728 GIG44P09565 113 aaPredicted RBP10.56□□□□□ -0.72
LSS-202ENST00000397728 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
LSS-202ENST00000397728 CR1P17927 2039 aa10.55□□□□□ -0.72
LSS-202ENST00000397728 A8MTW9 85 aa10.55□□□□□ -0.72
LSS-202ENST00000397728 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
LSS-202ENST00000397728 MP68P56378 58 aa10.54□□□□□ -0.72
LSS-202ENST00000397728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.54□□□□□ -0.72
LSS-202ENST00000397728 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
LSS-202ENST00000397728 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
LSS-202ENST00000397728 TM2D3Q9BRN9 247 aa10.53□□□□□ -0.72
LSS-202ENST00000397728 FAM240AA0A1B0GVK7 77 aa10.53□□□□□ -0.72
LSS-202ENST00000397728 FAM236DA0A1B0GTK5 79 aa10.52□□□□□ -0.72
LSS-202ENST00000397728 FAM236CP0DP71 79 aa10.52□□□□□ -0.72
LSS-202ENST00000397728 C22orf24Q9Y442 160 aa10.52□□□□□ -0.72
LSS-202ENST00000397728 NDUFC1O43677 76 aa10.52□□□□□ -0.73
LSS-202ENST00000397728 PRLHP81277 87 aa10.52□□□□□ -0.73
LSS-202ENST00000397728 LST1O00453 97 aa10.51□□□□□ -0.73
LSS-202ENST00000397728 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
LSS-202ENST00000397728 ENHOQ6UWT2 76 aa10.51□□□□□ -0.73
LSS-202ENST00000397728 BOD1L1Q8NFC6 3051 aa10.5□□□□□ -0.73
LSS-202ENST00000397728 RTL8CO15255 209 aa10.5□□□□□ -0.73
LSS-202ENST00000397728 REV3LO60673 3130 aa10.5□□□□□ -0.73
LSS-202ENST00000397728 V9GYY9 64 aa10.5□□□□□ -0.73
LSS-202ENST00000397728 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
LSS-202ENST00000397728 TACC2O95359 2948 aa10.5□□□□□ -0.73
LSS-202ENST00000397728 DNAH10OSP0CZ25 163 aa10.49□□□□□ -0.73
LSS-202ENST00000397728 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
LSS-202ENST00000397728 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
LSS-202ENST00000397728 IGKV4-1P06312 121 aa10.49□□□□□ -0.73
LSS-202ENST00000397728 COX7CP15954 63 aa10.48□□□□□ -0.73
LSS-202ENST00000397728 SERP2Q8N6R1 65 aa10.48□□□□□ -0.73
LSS-202ENST00000397728 UPK3BQ9BT76 320 aa10.48□□□□□ -0.73
LSS-202ENST00000397728 PRYO14603 147 aa10.47□□□□□ -0.73
LSS-202ENST00000397728 XGP55808 180 aa10.46□□□□□ -0.73
LSS-202ENST00000397728 ITPR1Q14643 2758 aa10.46□□□□□ -0.73
LSS-202ENST00000397728 Q8N814 137 aa10.45□□□□□ -0.74
LSS-202ENST00000397728 BRK1Q8WUW1 75 aa10.44□□□□□ -0.74
LSS-202ENST00000397728 Q9BRP9 147 aa10.44□□□□□ -0.74
LSS-202ENST00000397728 FREM2Q5SZK8 3169 aa10.43□□□□□ -0.74
LSS-202ENST00000397728 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
LSS-202ENST00000397728 LINC00167Q96N53 147 aa10.43□□□□□ -0.74
LSS-202ENST00000397728 EYSQ5T1H1 3165 aa10.43□□□□□ -0.74
LSS-202ENST00000397728 LINC01546A6NGU7 62 aa10.42□□□□□ -0.74
LSS-202ENST00000397728 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
LSS-202ENST00000397728 LINC00337Q8N6G1 96 aa10.41□□□□□ -0.74
LSS-202ENST00000397728 CHTF8P0CG12 524 aa10.41□□□□□ -0.74
LSS-202ENST00000397728 A0A087WYN8 130 aa10.41□□□□□ -0.74
LSS-202ENST00000397728 SDIM1Q6ZPB5 146 aa10.4□□□□□ -0.74
LSS-202ENST00000397728 IGLV5-45A0A087WSX0 123 aa10.4□□□□□ -0.74
LSS-202ENST00000397728 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.74
LSS-202ENST00000397728 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.75
LSS-202ENST00000397728 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
LSS-202ENST00000397728 WFDC13Q8IUB5 93 aa10.39□□□□□ -0.75
LSS-202ENST00000397728 NSD1Q96L73 2696 aaPredicted RBP10.38□□□□□ -0.75
LSS-202ENST00000397728 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
LSS-202ENST00000397728 DNAH14Q0VDD8 3507 aa10.37□□□□□ -0.75
LSS-202ENST00000397728 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
LSS-202ENST00000397728 Q6JHZ5 121 aa10.37□□□□□ -0.75
LSS-202ENST00000397728 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
LSS-202ENST00000397728 ZZEF1O43149 2961 aa10.37□□□□□ -0.75
LSS-202ENST00000397728 C20orf197Q8N268 126 aa10.36□□□□□ -0.75
LSS-202ENST00000397728 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
LSS-202ENST00000397728 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
LSS-202ENST00000397728 ADGRG4Q8IZF6 3080 aa10.34□□□□□ -0.75
LSS-202ENST00000397728 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
LSS-202ENST00000397728 SERP1Q9Y6X1 66 aa10.33□□□□□ -0.76
LSS-202ENST00000397728 KALRNO60229 2985 aa10.33□□□□□ -0.76
LSS-202ENST00000397728 HIVEP1P15822 2718 aa10.33□□□□□ -0.76
LSS-202ENST00000397728 A0A087WSZ3 146 aa10.32□□□□□ -0.76
LSS-202ENST00000397728 APLNQ9ULZ1 77 aa10.32□□□□□ -0.76
LSS-202ENST00000397728 Q6ZRP5 223 aa10.32□□□□□ -0.76
LSS-202ENST00000397728 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
LSS-202ENST00000397728 NBEAQ8NFP9 2946 aa10.31□□□□□ -0.76
LSS-202ENST00000397728 SPTBN5Q9NRC6 3674 aaKnown RBP10.3□□□□□ -0.76
LSS-202ENST00000397728 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
LSS-202ENST00000397728 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
LSS-202ENST00000397728 WIPF1O43516 503 aa10.28□□□□□ -0.76
LSS-202ENST00000397728 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
LSS-202ENST00000397728 A0A087WTM6 91 aa10.27□□□□□ -0.76
LSS-202ENST00000397728 UTP20O75691 2785 aaKnown RBP10.26□□□□□ -0.77
LSS-202ENST00000397728 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms