RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 MUSTN1Q8IVN3 82 aa10.9□□□□□ -0.66
TSPAN4-205ENST00000397406 CEND1Q8N111 149 aa10.9□□□□□ -0.66
TSPAN4-205ENST00000397406 SND1-IT1Q9HBX3 110 aa10.9□□□□□ -0.66
TSPAN4-205ENST00000397406 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
TSPAN4-205ENST00000397406 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
TSPAN4-205ENST00000397406 GCSHP23434 173 aa10.88□□□□□ -0.67
TSPAN4-205ENST00000397406 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
TSPAN4-205ENST00000397406 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
TSPAN4-205ENST00000397406 PPDPFQ9H3Y8 114 aa10.88□□□□□ -0.67
TSPAN4-205ENST00000397406 RPL18AQ02543 176 aaKnown RBP10.87□□□□□ -0.67
TSPAN4-205ENST00000397406 HINT1P49773 126 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-205ENST00000397406 FXYD2P54710 66 aa10.86□□□□□ -0.67
TSPAN4-205ENST00000397406 LINC01620Q4KN68 170 aa10.86□□□□□ -0.67
TSPAN4-205ENST00000397406 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
TSPAN4-205ENST00000397406 BVES-AS1Q5T3Y7 98 aa10.86□□□□□ -0.67
TSPAN4-205ENST00000397406 GAGE2DQ9UEU5 116 aa10.86□□□□□ -0.67
TSPAN4-205ENST00000397406 COPS9Q8WXC6 57 aa10.85□□□□□ -0.67
TSPAN4-205ENST00000397406 XAGE1AQ9HD64 81 aa10.85□□□□□ -0.67
TSPAN4-205ENST00000397406 IGLV5-52A0A0A0MRZ9 124 aa10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 M0R143 59 aa10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 A0A096LNI7 61 aa10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 GAGE2BQ13066 116 aa10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 C9orf129Q5T035 196 aaKnown RBP10.84□□□□□ -0.67
TSPAN4-205ENST00000397406 A4D1N5 150 aa10.83□□□□□ -0.68
TSPAN4-205ENST00000397406 Q8NDZ9 215 aa10.83□□□□□ -0.68
TSPAN4-205ENST00000397406 PKIGQ9Y2B9 76 aa10.83□□□□□ -0.68
TSPAN4-205ENST00000397406 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
TSPAN4-205ENST00000397406 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
TSPAN4-205ENST00000397406 A6NJY4 79 aa10.8□□□□□ -0.68
TSPAN4-205ENST00000397406 SNHG12Q9BXW3 62 aa10.8□□□□□ -0.68
TSPAN4-205ENST00000397406 NDUFC2O95298 119 aa10.79□□□□□ -0.68
TSPAN4-205ENST00000397406 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
TSPAN4-205ENST00000397406 CHTF8P0CG12 524 aa10.78□□□□□ -0.68
TSPAN4-205ENST00000397406 BATFQ16520 125 aa10.78□□□□□ -0.68
TSPAN4-205ENST00000397406 IGKV2-28A0A075B6P5 120 aa10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 IGKV2D-28P01615 120 aa10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 CFC1BP0CG36 223 aa10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 CFC1P0CG37 223 aa10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 VPREB1P12018 145 aa10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 PLA2G2DQ9UNK4 145 aa10.77□□□□□ -0.68
TSPAN4-205ENST00000397406 A0A1B0GWB2 263 aa10.76□□□□□ -0.69
TSPAN4-205ENST00000397406 PANO1I0J062 215 aa10.76□□□□□ -0.69
TSPAN4-205ENST00000397406 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 PRR3P79522 188 aaKnown RBP10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 KRTAP7-1Q8IUC3 87 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 FAT1Q14517 4588 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 A0A0B4J2C4 111 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 SPACA4Q8TDM5 124 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
TSPAN4-205ENST00000397406 A6NDN8 102 aa10.74□□□□□ -0.69
TSPAN4-205ENST00000397406 Q8N1X5 172 aa10.74□□□□□ -0.69
TSPAN4-205ENST00000397406 IGLV5-37A0A075B6J1 123 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 A0A1W2PNN7 141 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 K7ERJ3 54 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 NCR3O14931 201 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 XGP55808 180 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 KRTAP10-1P60331 282 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
TSPAN4-205ENST00000397406 TRBV10-2A0A0K0K1G8 114 aa10.72□□□□□ -0.69
TSPAN4-205ENST00000397406 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
TSPAN4-205ENST00000397406 RAB37Q96AX2 223 aa10.71□□□□□ -0.69
TSPAN4-205ENST00000397406 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
TSPAN4-205ENST00000397406 PRO1854Q9UHT4 67 aa10.69□□□□□ -0.7
TSPAN4-205ENST00000397406 EPM2AB3EWF7 344 aa10.68□□□□□ -0.7
TSPAN4-205ENST00000397406 M0R378 163 aa10.68□□□□□ -0.7
TSPAN4-205ENST00000397406 Q6ZSA8 131 aa10.68□□□□□ -0.7
TSPAN4-205ENST00000397406 NKAPP1Q8N9T2 125 aa10.68□□□□□ -0.7
TSPAN4-205ENST00000397406 C22orf24Q9Y442 160 aa10.68□□□□□ -0.7
TSPAN4-205ENST00000397406 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
TSPAN4-205ENST00000397406 FAM30AQ9NZY2 134 aa10.67□□□□□ -0.7
TSPAN4-205ENST00000397406 A0A087WYN8 130 aa10.67□□□□□ -0.7
TSPAN4-205ENST00000397406 RPL13AP40429 203 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-205ENST00000397406 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
TSPAN4-205ENST00000397406 C7orf33Q8WU49 177 aa10.67□□□□□ -0.7
TSPAN4-205ENST00000397406 M0QXV9 152 aa10.66□□□□□ -0.7
TSPAN4-205ENST00000397406 IGLV6-57P01721 117 aa10.66□□□□□ -0.7
TSPAN4-205ENST00000397406 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
TSPAN4-205ENST00000397406 TAX1BP3O14907 124 aa10.65□□□□□ -0.7
TSPAN4-205ENST00000397406 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.7
TSPAN4-205ENST00000397406 DPH3Q96FX2 82 aa10.65□□□□□ -0.7
TSPAN4-205ENST00000397406 TMEM126AQ9H061 195 aa10.65□□□□□ -0.7
TSPAN4-205ENST00000397406 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
TSPAN4-205ENST00000397406 TRBV10-3A0A0K0K1G6 114 aa10.64□□□□□ -0.71
TSPAN4-205ENST00000397406 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
TSPAN4-205ENST00000397406 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
TSPAN4-205ENST00000397406 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
TSPAN4-205ENST00000397406 TSPAN13O95857 204 aa10.63□□□□□ -0.71
TSPAN4-205ENST00000397406 H7C2G1 150 aa10.62□□□□□ -0.71
TSPAN4-205ENST00000397406 HAMPP81172 84 aa10.62□□□□□ -0.71
TSPAN4-205ENST00000397406 PHF5AQ7RTV0 110 aaKnown RBP10.62□□□□□ -0.71
TSPAN4-205ENST00000397406 IGLV1-50A0A075B6I6 118 aa10.6□□□□□ -0.71
TSPAN4-205ENST00000397406 LBHQ53QV2 105 aaPredicted RBP10.6□□□□□ -0.71
TSPAN4-205ENST00000397406 SMIM11BQ8TCY0 68 aa10.6□□□□□ -0.71
TSPAN4-205ENST00000397406 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms