RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 MYMXA0A1B0GTQ4 84 aa6.55□□□□□ -1.36
NUP98-205ENST00000397007 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
NUP98-205ENST00000397007 SRSF9Q13242 221 aaKnown RBP eCLIP6.55□□□□□ -1.36
NUP98-205ENST00000397007 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
NUP98-205ENST00000397007 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
NUP98-205ENST00000397007 HERVK_113P61574 105 aa6.54□□□□□ -1.36
NUP98-205ENST00000397007 ATOH7Q8N100 152 aa6.54□□□□□ -1.36
NUP98-205ENST00000397007 C20orf202A1L168 122 aa6.54□□□□□ -1.36
NUP98-205ENST00000397007 TOMM7Q9P0U1 55 aa6.54□□□□□ -1.36
NUP98-205ENST00000397007 NDUFC2O95298 119 aa6.53□□□□□ -1.36
NUP98-205ENST00000397007 COX8AP10176 69 aa6.53□□□□□ -1.36
NUP98-205ENST00000397007 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
NUP98-205ENST00000397007 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
NUP98-205ENST00000397007 SPRR1AP35321 89 aa6.53□□□□□ -1.36
NUP98-205ENST00000397007 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
NUP98-205ENST00000397007 HNRNPA3P51991 378 aaKnown RBP6.53□□□□□ -1.36
NUP98-205ENST00000397007 HAMPP81172 84 aa6.52□□□□□ -1.37
NUP98-205ENST00000397007 RPL18AQ02543 176 aaKnown RBP6.51□□□□□ -1.37
NUP98-205ENST00000397007 IGKV2-28A0A075B6P5 120 aa6.51□□□□□ -1.37
NUP98-205ENST00000397007 LINC00587B1AMM8 73 aa6.51□□□□□ -1.37
NUP98-205ENST00000397007 IGKV2D-28P01615 120 aa6.51□□□□□ -1.37
NUP98-205ENST00000397007 HIGD1BQ9P298 99 aa6.51□□□□□ -1.37
NUP98-205ENST00000397007 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
NUP98-205ENST00000397007 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
NUP98-205ENST00000397007 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
NUP98-205ENST00000397007 LINC00528Q8N1L1 170 aa6.5□□□□□ -1.37
NUP98-205ENST00000397007 MIR7-3HGQ8N6C7 128 aa6.5□□□□□ -1.37
NUP98-205ENST00000397007 IGLV6-57P01721 117 aa6.49□□□□□ -1.37
NUP98-205ENST00000397007 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
NUP98-205ENST00000397007 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
NUP98-205ENST00000397007 Q6ZVH6 145 aa6.49□□□□□ -1.37
NUP98-205ENST00000397007 PHF5AQ7RTV0 110 aaKnown RBP6.49□□□□□ -1.37
NUP98-205ENST00000397007 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
NUP98-205ENST00000397007 Q5VSD8 79 aa6.49□□□□□ -1.37
NUP98-205ENST00000397007 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
NUP98-205ENST00000397007 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
NUP98-205ENST00000397007 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
NUP98-205ENST00000397007 IGKV2-24A0A0C4DH68 120 aa6.48□□□□□ -1.37
NUP98-205ENST00000397007 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
NUP98-205ENST00000397007 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
NUP98-205ENST00000397007 GAGE2EQ4V326 116 aa6.47□□□□□ -1.37
NUP98-205ENST00000397007 MRPL55Q7Z7F7 128 aaKnown RBP6.47□□□□□ -1.37
NUP98-205ENST00000397007 GAGE2DQ9UEU5 116 aa6.47□□□□□ -1.37
NUP98-205ENST00000397007 LINC00167Q96N53 147 aa6.47□□□□□ -1.37
NUP98-205ENST00000397007 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
NUP98-205ENST00000397007 M0QXV9 152 aa6.46□□□□□ -1.38
NUP98-205ENST00000397007 SCGB1D1O95968 90 aa6.46□□□□□ -1.38
NUP98-205ENST00000397007 PFN2P35080 140 aa6.46□□□□□ -1.38
NUP98-205ENST00000397007 SMIM6P0DI80 62 aa6.46□□□□□ -1.38
NUP98-205ENST00000397007 H0Y9J4 135 aa6.45□□□□□ -1.38
NUP98-205ENST00000397007 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
NUP98-205ENST00000397007 DAND5Q8N907 189 aa6.45□□□□□ -1.38
NUP98-205ENST00000397007 M0R378 163 aa6.45□□□□□ -1.38
NUP98-205ENST00000397007 IFITM1P13164 125 aa6.45□□□□□ -1.38
NUP98-205ENST00000397007 SPATA45Q537H7 98 aa6.45□□□□□ -1.38
NUP98-205ENST00000397007 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
NUP98-205ENST00000397007 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
NUP98-205ENST00000397007 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
NUP98-205ENST00000397007 TMEM238C9JI98 176 aa6.42□□□□□ -1.38
NUP98-205ENST00000397007 LINC00158P58513 81 aa6.42□□□□□ -1.38
NUP98-205ENST00000397007 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
NUP98-205ENST00000397007 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
NUP98-205ENST00000397007 VAMP8Q9BV40 100 aa6.42□□□□□ -1.38
NUP98-205ENST00000397007 MT1HL1P0DM35 61 aa6.41□□□□□ -1.38
NUP98-205ENST00000397007 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
NUP98-205ENST00000397007 IGLV7-43P04211 117 aa6.41□□□□□ -1.38
NUP98-205ENST00000397007 TAL2Q16559 108 aa6.41□□□□□ -1.38
NUP98-205ENST00000397007 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
NUP98-205ENST00000397007 PAM16Q9Y3D7 125 aa6.41□□□□□ -1.38
NUP98-205ENST00000397007 PRYO14603 147 aa6.4□□□□□ -1.38
NUP98-205ENST00000397007 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
NUP98-205ENST00000397007 BCE1O60756 84 aa6.4□□□□□ -1.38
NUP98-205ENST00000397007 MUSTN1Q8IVN3 82 aa6.4□□□□□ -1.38
NUP98-205ENST00000397007 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.39
NUP98-205ENST00000397007 SPINK6Q6UWN8 80 aa6.39□□□□□ -1.39
NUP98-205ENST00000397007 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
NUP98-205ENST00000397007 C14orf144Q96I85 54 aa6.39□□□□□ -1.39
NUP98-205ENST00000397007 TMEM126AQ9H061 195 aa6.39□□□□□ -1.39
NUP98-205ENST00000397007 B5MCH6 92 aa6.38□□□□□ -1.39
NUP98-205ENST00000397007 TRBV10-3A0A0K0K1G6 114 aa6.38□□□□□ -1.39
NUP98-205ENST00000397007 HSBP1L1C9JCN9 74 aa6.38□□□□□ -1.39
NUP98-205ENST00000397007 HERC1Q15751 4861 aa6.38□□□□□ -1.39
NUP98-205ENST00000397007 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
NUP98-205ENST00000397007 LINC00518Q8N0U6 118 aa6.38□□□□□ -1.39
NUP98-205ENST00000397007 TRBV7-6A0A0J9YX20 115 aa6.37□□□□□ -1.39
NUP98-205ENST00000397007 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
NUP98-205ENST00000397007 A0A0U1RRA0 63 aa6.37□□□□□ -1.39
NUP98-205ENST00000397007 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
NUP98-205ENST00000397007 ZNF861PO60384 105 aa6.36□□□□□ -1.39
NUP98-205ENST00000397007 SMCR5Q8TEV8 140 aa6.36□□□□□ -1.39
NUP98-205ENST00000397007 Q9BRP9 147 aa6.36□□□□□ -1.39
NUP98-205ENST00000397007 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
NUP98-205ENST00000397007 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 NCR3O14931 201 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 LINC01600Q96MT4 127 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
NUP98-205ENST00000397007 CEND1Q8N111 149 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms