RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 FAM236CP0DP71 79 aa11.06□□□□□ -0.64
PDZD4-202ENST00000393758 ATP5EP2Q5VTU8 51 aa11.06□□□□□ -0.64
PDZD4-202ENST00000393758 A0A1B0GUV1 79 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 APOC4P55056 127 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 CSNK1G2-AS1Q8NCQ2 148 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 COX7BP24311 80 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 LINC00575Q6W349 94 aa11.05□□□□□ -0.64
PDZD4-202ENST00000393758 UBR5O95071 2799 aaPredicted RBP11.04□□□□□ -0.64
PDZD4-202ENST00000393758 IGKV2D-24A0A075B6R9 120 aa11.03□□□□□ -0.64
PDZD4-202ENST00000393758 COX17Q14061 63 aa11.02□□□□□ -0.64
PDZD4-202ENST00000393758 C4orf26Q17RF5 130 aa11.02□□□□□ -0.64
PDZD4-202ENST00000393758 Q6ZVQ6 151 aa11.02□□□□□ -0.65
PDZD4-202ENST00000393758 C19orf73Q9NVV2 129 aa11.02□□□□□ -0.65
PDZD4-202ENST00000393758 C3orf84H3BNL1 204 aa11.01□□□□□ -0.65
PDZD4-202ENST00000393758 LYRM9A8MSI8 78 aa11.01□□□□□ -0.65
PDZD4-202ENST00000393758 NDUFC2O95298 119 aa11□□□□□ -0.65
PDZD4-202ENST00000393758 LINC01547P58512 204 aaPredicted RBP11□□□□□ -0.65
PDZD4-202ENST00000393758 RMI2Q96E14 147 aa11□□□□□ -0.65
PDZD4-202ENST00000393758 M0R2N4 97 aa11□□□□□ -0.65
PDZD4-202ENST00000393758 Q8N9L7 120 aa11□□□□□ -0.65
PDZD4-202ENST00000393758 NREPQ16612 68 aa11□□□□□ -0.65
PDZD4-202ENST00000393758 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
PDZD4-202ENST00000393758 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
PDZD4-202ENST00000393758 CELA1Q9UNI1 258 aa10.99□□□□□ -0.65
PDZD4-202ENST00000393758 ZNF73O43830 326 aaPredicted RBP10.99□□□□□ -0.65
PDZD4-202ENST00000393758 X6R8D5 127 aa10.99□□□□□ -0.65
PDZD4-202ENST00000393758 NANOS2P60321 138 aaKnown RBP10.99□□□□□ -0.65
PDZD4-202ENST00000393758 LY6G6DO95868 133 aa10.98□□□□□ -0.65
PDZD4-202ENST00000393758 C9orf66Q5T8R8 295 aa10.98□□□□□ -0.65
PDZD4-202ENST00000393758 F8WEM9 126 aa10.98□□□□□ -0.65
PDZD4-202ENST00000393758 HELZ2Q9BYK8 2649 aaKnown RBP10.98□□□□□ -0.65
PDZD4-202ENST00000393758 TRAV10A0A0B4J240 114 aa10.97□□□□□ -0.65
PDZD4-202ENST00000393758 PRB2P02812 416 aaPredicted RBP10.97□□□□□ -0.65
PDZD4-202ENST00000393758 KIAA0087Q14695 138 aa10.97□□□□□ -0.65
PDZD4-202ENST00000393758 TEP1Q99973 2627 aaKnown RBP10.95□□□□□ -0.66
PDZD4-202ENST00000393758 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
PDZD4-202ENST00000393758 Q6ZQT0 140 aa10.95□□□□□ -0.66
PDZD4-202ENST00000393758 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
PDZD4-202ENST00000393758 Q8NDZ9 215 aa10.94□□□□□ -0.66
PDZD4-202ENST00000393758 OBSCN-AS1Q96MR7 158 aa10.94□□□□□ -0.66
PDZD4-202ENST00000393758 TRAV7A0A075B6U4 112 aa10.94□□□□□ -0.66
PDZD4-202ENST00000393758 PDE6GP18545 87 aa10.94□□□□□ -0.66
PDZD4-202ENST00000393758 LELP1Q5T871 98 aa10.94□□□□□ -0.66
PDZD4-202ENST00000393758 SPATA3Q8NHX4 192 aa10.92□□□□□ -0.66
PDZD4-202ENST00000393758 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
PDZD4-202ENST00000393758 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
PDZD4-202ENST00000393758 BPY2O14599 106 aa10.9□□□□□ -0.66
PDZD4-202ENST00000393758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.9□□□□□ -0.66
PDZD4-202ENST00000393758 C6orf48Q9UBA6 75 aa10.9□□□□□ -0.66
PDZD4-202ENST00000393758 WFDC10BQ8IUB3 73 aa10.9□□□□□ -0.67
PDZD4-202ENST00000393758 MRAPQ8TCY5 172 aa10.9□□□□□ -0.67
PDZD4-202ENST00000393758 RETNQ9HD89 108 aa10.89□□□□□ -0.67
PDZD4-202ENST00000393758 TM2D3Q9BRN9 247 aa10.88□□□□□ -0.67
PDZD4-202ENST00000393758 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
PDZD4-202ENST00000393758 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
PDZD4-202ENST00000393758 KRTAP1-3Q8IUG1 177 aa10.88□□□□□ -0.67
PDZD4-202ENST00000393758 C16orf95Q9H693 158 aa10.88□□□□□ -0.67
PDZD4-202ENST00000393758 KPRPQ5T749 579 aaPredicted RBP10.87□□□□□ -0.67
PDZD4-202ENST00000393758 MIFP14174 115 aa10.86□□□□□ -0.67
PDZD4-202ENST00000393758 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
PDZD4-202ENST00000393758 Q6ZRU5 148 aa10.86□□□□□ -0.67
PDZD4-202ENST00000393758 IGHV4-30-4P0DP06 118 aa10.85□□□□□ -0.67
PDZD4-202ENST00000393758 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDZD4-202ENST00000393758 ETDCA0A1B0GVM5 59 aa10.84□□□□□ -0.67
PDZD4-202ENST00000393758 M0R378 163 aa10.84□□□□□ -0.67
PDZD4-202ENST00000393758 UBE2BP63146 152 aa10.84□□□□□ -0.67
PDZD4-202ENST00000393758 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
PDZD4-202ENST00000393758 PKIGQ9Y2B9 76 aa10.83□□□□□ -0.68
PDZD4-202ENST00000393758 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
PDZD4-202ENST00000393758 OXTP01178 125 aa10.82□□□□□ -0.68
PDZD4-202ENST00000393758 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
PDZD4-202ENST00000393758 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
PDZD4-202ENST00000393758 IGLV6-57P01721 117 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 KRTAP10-3P60369 221 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 SERP1Q9Y6X1 66 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 A0A0U1RQV1 116 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 HIVEP1P15822 2718 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 H3BQ85 93 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 PRR4Q16378 134 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 FAM30AQ9NZY2 134 aa10.81□□□□□ -0.68
PDZD4-202ENST00000393758 LOC110117498A0A087WWA1 95 aa10.8□□□□□ -0.68
PDZD4-202ENST00000393758 SYCNQ0VAF6 134 aa10.8□□□□□ -0.68
PDZD4-202ENST00000393758 NOTCH1P46531 2555 aa10.8□□□□□ -0.68
PDZD4-202ENST00000393758 NDUFC2-KCTD14E9PQ53 114 aa10.8□□□□□ -0.68
PDZD4-202ENST00000393758 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
PDZD4-202ENST00000393758 A0A0J9YWU9 116 aa10.79□□□□□ -0.68
PDZD4-202ENST00000393758 Q6ZTC4 211 aa10.79□□□□□ -0.68
PDZD4-202ENST00000393758 TMEM254Q8TBM7 123 aa10.79□□□□□ -0.68
PDZD4-202ENST00000393758 J3QKU1 62 aa10.78□□□□□ -0.68
PDZD4-202ENST00000393758 LINC00612Q8N6U2 182 aa10.78□□□□□ -0.68
PDZD4-202ENST00000393758 H7BZZ5 65 aa10.77□□□□□ -0.68
PDZD4-202ENST00000393758 CXCL6P80162 114 aa10.77□□□□□ -0.69
PDZD4-202ENST00000393758 EGFEM1PQ0D2K5 195 aa10.77□□□□□ -0.69
PDZD4-202ENST00000393758 Q8NAQ8 132 aa10.76□□□□□ -0.69
PDZD4-202ENST00000393758 BAHCC1Q9P281 2608 aa10.76□□□□□ -0.69
PDZD4-202ENST00000393758 MAST4O15021 2626 aa10.75□□□□□ -0.69
PDZD4-202ENST00000393758 SMIM26A0A096LP01 95 aa10.75□□□□□ -0.69
PDZD4-202ENST00000393758 ELOF1P60002 83 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms