RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 K7EIL1 84 aa9.53□□□□□ -0.88
MKS1-203ENST00000393120 C1orf43Q9BWL3 253 aa9.52□□□□□ -0.88
MKS1-203ENST00000393120 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.89
MKS1-203ENST00000393120 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
MKS1-203ENST00000393120 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
MKS1-203ENST00000393120 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
MKS1-203ENST00000393120 OBSCN-AS1Q96MR7 158 aa9.52□□□□□ -0.89
MKS1-203ENST00000393120 CMYA5Q8N3K9 4069 aa9.51□□□□□ -0.89
MKS1-203ENST00000393120 NCR3O14931 201 aa9.51□□□□□ -0.89
MKS1-203ENST00000393120 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
MKS1-203ENST00000393120 SNCGO76070 127 aa9.5□□□□□ -0.89
MKS1-203ENST00000393120 Q8N814 137 aa9.5□□□□□ -0.89
MKS1-203ENST00000393120 ORMDL1Q9P0S3 153 aa9.5□□□□□ -0.89
MKS1-203ENST00000393120 MAST4O15021 2626 aa9.5□□□□□ -0.89
MKS1-203ENST00000393120 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
MKS1-203ENST00000393120 HIGD2BQ4VC39 106 aa9.49□□□□□ -0.89
MKS1-203ENST00000393120 PKD1L1Q8TDX9 2849 aa9.49□□□□□ -0.89
MKS1-203ENST00000393120 C6orf99Q4VX62 202 aa9.48□□□□□ -0.89
MKS1-203ENST00000393120 Q6Q795 121 aa9.48□□□□□ -0.89
MKS1-203ENST00000393120 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
MKS1-203ENST00000393120 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
MKS1-203ENST00000393120 Q6ZRU5 148 aa9.47□□□□□ -0.89
MKS1-203ENST00000393120 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.89
MKS1-203ENST00000393120 LINC00575Q6W349 94 aa9.46□□□□□ -0.89
MKS1-203ENST00000393120 LINC00588Q9Y4M8 146 aa9.46□□□□□ -0.89
MKS1-203ENST00000393120 NDUFC2-KCTD14E9PQ53 114 aa9.46□□□□□ -0.9
MKS1-203ENST00000393120 SLPIP03973 132 aa9.46□□□□□ -0.9
MKS1-203ENST00000393120 TENM3Q9P273 2699 aa9.46□□□□□ -0.9
MKS1-203ENST00000393120 TMEM256-PLSCR3K7ERE1 68 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 GAGE2BQ13066 116 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 ANK2Q01484 3957 aa9.45□□□□□ -0.9
MKS1-203ENST00000393120 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
MKS1-203ENST00000393120 VPREB1P12018 145 aa9.43□□□□□ -0.9
MKS1-203ENST00000393120 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
MKS1-203ENST00000393120 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
MKS1-203ENST00000393120 UPK3BQ9BT76 320 aa9.43□□□□□ -0.9
MKS1-203ENST00000393120 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
MKS1-203ENST00000393120 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
MKS1-203ENST00000393120 COL6A5A8TX70 2615 aa9.42□□□□□ -0.9
MKS1-203ENST00000393120 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 JMJD7-PLA2G4BH0Y9G9 81 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 M0R378 163 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 A0A1B0GV72 72 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 GAGE2AQ6NT46 116 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 C14orf132Q9NPU4 83 aa9.41□□□□□ -0.9
MKS1-203ENST00000393120 H3BQ85 93 aa9.4□□□□□ -0.9
MKS1-203ENST00000393120 DIRC1Q969H9 104 aa9.4□□□□□ -0.9
MKS1-203ENST00000393120 RMI2Q96E14 147 aa9.4□□□□□ -0.9
MKS1-203ENST00000393120 Q6ZRP5 223 aa9.39□□□□□ -0.91
MKS1-203ENST00000393120 SMCR5Q8TEV8 140 aa9.39□□□□□ -0.91
MKS1-203ENST00000393120 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
MKS1-203ENST00000393120 ZNF73O43830 326 aaPredicted RBP9.39□□□□□ -0.91
MKS1-203ENST00000393120 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
MKS1-203ENST00000393120 NOTCH1P46531 2555 aa9.37□□□□□ -0.91
MKS1-203ENST00000393120 CCKP06307 115 aa9.36□□□□□ -0.91
MKS1-203ENST00000393120 COX7BP24311 80 aa9.36□□□□□ -0.91
MKS1-203ENST00000393120 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
MKS1-203ENST00000393120 ELOF1P60002 83 aaKnown RBP9.35□□□□□ -0.91
MKS1-203ENST00000393120 NDUFV3P56181 108 aaKnown RBP9.35□□□□□ -0.91
MKS1-203ENST00000393120 PLA2G2DQ9UNK4 145 aa9.35□□□□□ -0.91
MKS1-203ENST00000393120 GHRHP01286 108 aa9.33□□□□□ -0.92
MKS1-203ENST00000393120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.33□□□□□ -0.92
MKS1-203ENST00000393120 MDFIQ99750 246 aa9.33□□□□□ -0.92
MKS1-203ENST00000393120 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
MKS1-203ENST00000393120 Q6ZQY7 126 aa9.32□□□□□ -0.92
MKS1-203ENST00000393120 ANAPC13Q9BS18 74 aa9.32□□□□□ -0.92
MKS1-203ENST00000393120 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
MKS1-203ENST00000393120 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
MKS1-203ENST00000393120 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
MKS1-203ENST00000393120 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
MKS1-203ENST00000393120 IGLV5-37A0A075B6J1 123 aa9.3□□□□□ -0.92
MKS1-203ENST00000393120 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
MKS1-203ENST00000393120 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
MKS1-203ENST00000393120 RBM3P98179 157 aaKnown RBP9.3□□□□□ -0.92
MKS1-203ENST00000393120 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
MKS1-203ENST00000393120 NKAPP1Q8N9T2 125 aa9.29□□□□□ -0.92
MKS1-203ENST00000393120 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
MKS1-203ENST00000393120 Q6JHZ5 121 aa9.28□□□□□ -0.92
MKS1-203ENST00000393120 PDE6GP18545 87 aa9.27□□□□□ -0.93
MKS1-203ENST00000393120 C7orf33Q8WU49 177 aa9.27□□□□□ -0.93
MKS1-203ENST00000393120 LAMTOR3Q9UHA4 124 aa9.27□□□□□ -0.93
MKS1-203ENST00000393120 APLNQ9ULZ1 77 aa9.27□□□□□ -0.93
MKS1-203ENST00000393120 HUWE1Q7Z6Z7 4374 aaKnown RBP9.27□□□□□ -0.93
MKS1-203ENST00000393120 Q6ZQT0 140 aa9.27□□□□□ -0.93
MKS1-203ENST00000393120 MGAM2Q2M2H8 2515 aa9.25□□□□□ -0.93
MKS1-203ENST00000393120 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
MKS1-203ENST00000393120 DSCR8Q96T75 97 aa9.23□□□□□ -0.93
MKS1-203ENST00000393120 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
MKS1-203ENST00000393120 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
MKS1-203ENST00000393120 PRYO14603 147 aa9.21□□□□□ -0.93
MKS1-203ENST00000393120 ATP5EP2Q5VTU8 51 aa9.21□□□□□ -0.93
MKS1-203ENST00000393120 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
MKS1-203ENST00000393120 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms