RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 SMIM11BQ8TCY0 68 aa14.05□□□□□ -0.16
SPHK1-202ENST00000392496 C9JAW5 83 aa14.04□□□□□ -0.16
SPHK1-202ENST00000392496 OCIAD2Q56VL3 154 aa14.04□□□□□ -0.16
SPHK1-202ENST00000392496 KRTAP1-5Q9BYS1 174 aa14.04□□□□□ -0.16
SPHK1-202ENST00000392496 NDUFC2-KCTD14E9PQ53 114 aa14.03□□□□□ -0.16
SPHK1-202ENST00000392496 PRR3P79522 188 aaKnown RBP14.03□□□□□ -0.16
SPHK1-202ENST00000392496 Q8NDZ9 215 aa14.03□□□□□ -0.16
SPHK1-202ENST00000392496 RNF151Q2KHN1 245 aa14.02□□□□□ -0.16
SPHK1-202ENST00000392496 C3orf84H3BNL1 204 aa14.01□□□□□ -0.17
SPHK1-202ENST00000392496 M0QXV9 152 aa14.01□□□□□ -0.17
SPHK1-202ENST00000392496 SLC25A20O43772 301 aa14.01□□□□□ -0.17
SPHK1-202ENST00000392496 TMEM126AQ9H061 195 aa14.01□□□□□ -0.17
SPHK1-202ENST00000392496 ETDBQ3ZM63 59 aa14□□□□□ -0.17
SPHK1-202ENST00000392496 CARD19Q96LW7 228 aa14□□□□□ -0.17
SPHK1-202ENST00000392496 TRBV10-2A0A0K0K1G8 114 aa13.99□□□□□ -0.17
SPHK1-202ENST00000392496 LINC01600Q96MT4 127 aa13.99□□□□□ -0.17
SPHK1-202ENST00000392496 XAGE1AQ9HD64 81 aa13.99□□□□□ -0.17
SPHK1-202ENST00000392496 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
SPHK1-202ENST00000392496 NCR3O14931 201 aa13.99□□□□□ -0.17
SPHK1-202ENST00000392496 PLECQ15149 4684 aaKnown RBP13.98□□□□□ -0.17
SPHK1-202ENST00000392496 H0YGX0 51 aa13.98□□□□□ -0.17
SPHK1-202ENST00000392496 K7ERU9 68 aa13.98□□□□□ -0.17
SPHK1-202ENST00000392496 TTC32Q5I0X7 151 aa13.97□□□□□ -0.17
SPHK1-202ENST00000392496 TRACP01848 142 aa13.96□□□□□ -0.17
SPHK1-202ENST00000392496 SLPIP03973 132 aa13.96□□□□□ -0.17
SPHK1-202ENST00000392496 TLX1NBP0CAT3 122 aa13.96□□□□□ -0.17
SPHK1-202ENST00000392496 CSMD3Q7Z407 3707 aa13.96□□□□□ -0.17
SPHK1-202ENST00000392496 ANKRD29Q8N6D5 301 aa13.96□□□□□ -0.18
SPHK1-202ENST00000392496 S100A7L2Q5SY68 101 aa13.95□□□□□ -0.18
SPHK1-202ENST00000392496 Q6ZRP5 223 aa13.95□□□□□ -0.18
SPHK1-202ENST00000392496 FAM218AQ96MZ4 157 aa13.94□□□□□ -0.18
SPHK1-202ENST00000392496 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
SPHK1-202ENST00000392496 H3BT86 120 aa13.94□□□□□ -0.18
SPHK1-202ENST00000392496 TEN1Q86WV5 123 aa13.94□□□□□ -0.18
SPHK1-202ENST00000392496 RPL18AQ02543 176 aaKnown RBP13.93□□□□□ -0.18
SPHK1-202ENST00000392496 GAGE2EQ4V326 116 aa13.93□□□□□ -0.18
SPHK1-202ENST00000392496 GAGE2DQ9UEU5 116 aa13.93□□□□□ -0.18
SPHK1-202ENST00000392496 LECT2O14960 151 aa13.92□□□□□ -0.18
SPHK1-202ENST00000392496 IGLV6-57P01721 117 aa13.92□□□□□ -0.18
SPHK1-202ENST00000392496 VPREB1P12018 145 aa13.92□□□□□ -0.18
SPHK1-202ENST00000392496 PSCAO43653 123 aa13.91□□□□□ -0.18
SPHK1-202ENST00000392496 LYSTQ99698 3801 aa13.89□□□□□ -0.19
SPHK1-202ENST00000392496 VPS13DQ5THJ4 4388 aa13.88□□□□□ -0.19
SPHK1-202ENST00000392496 C9orf129Q5T035 196 aaKnown RBP13.88□□□□□ -0.19
SPHK1-202ENST00000392496 J3QR89 54 aa13.87□□□□□ -0.19
SPHK1-202ENST00000392496 M0R378 163 aa13.87□□□□□ -0.19
SPHK1-202ENST00000392496 PPDPFLQ8WWR9 84 aa13.87□□□□□ -0.19
SPHK1-202ENST00000392496 STARD9Q9P2P6 4700 aa13.87□□□□□ -0.19
SPHK1-202ENST00000392496 A0A087WYN8 130 aa13.86□□□□□ -0.19
SPHK1-202ENST00000392496 TRBV10-3A0A0K0K1G6 114 aa13.86□□□□□ -0.19
SPHK1-202ENST00000392496 C14orf177Q52M58 125 aa13.86□□□□□ -0.19
SPHK1-202ENST00000392496 PLA2G2DQ9UNK4 145 aa13.85□□□□□ -0.19
SPHK1-202ENST00000392496 A0A1B0GX51 115 aa13.84□□□□□ -0.19
SPHK1-202ENST00000392496 C6orf99Q4VX62 202 aa13.84□□□□□ -0.19
SPHK1-202ENST00000392496 LOC107984640A0A0U1RRK4 108 aa13.83□□□□□ -0.19
SPHK1-202ENST00000392496 CNBPP62633 177 aaKnown RBP13.83□□□□□ -0.19
SPHK1-202ENST00000392496 DNAL4O96015 105 aa13.83□□□□□ -0.2
SPHK1-202ENST00000392496 TRAV23DV6A0A075B6W5 121 aa13.81□□□□□ -0.2
SPHK1-202ENST00000392496 DNAH10Q8IVF4 4471 aa13.81□□□□□ -0.2
SPHK1-202ENST00000392496 BAALC-AS2P0C853 105 aa13.81□□□□□ -0.2
SPHK1-202ENST00000392496 CBY1Q9Y3M2 126 aa13.81□□□□□ -0.2
SPHK1-202ENST00000392496 Q6ZRN7 208 aaPredicted RBP13.8□□□□□ -0.2
SPHK1-202ENST00000392496 TENM2Q9NT68 2774 aa13.79□□□□□ -0.2
SPHK1-202ENST00000392496 GAGE2BQ13066 116 aa13.78□□□□□ -0.2
SPHK1-202ENST00000392496 NKAPP1Q8N9T2 125 aa13.78□□□□□ -0.2
SPHK1-202ENST00000392496 IGLV5-37A0A075B6J1 123 aa13.78□□□□□ -0.2
SPHK1-202ENST00000392496 LRCOL1A6NCL2 159 aa13.78□□□□□ -0.2
SPHK1-202ENST00000392496 SERTAD4-AS1Q5TG53 156 aa13.78□□□□□ -0.2
SPHK1-202ENST00000392496 LINC00167Q96N53 147 aa13.78□□□□□ -0.2
SPHK1-202ENST00000392496 DIRC1Q969H9 104 aa13.77□□□□□ -0.21
SPHK1-202ENST00000392496 SNCGO76070 127 aa13.76□□□□□ -0.21
SPHK1-202ENST00000392496 Q8N814 137 aa13.76□□□□□ -0.21
SPHK1-202ENST00000392496 ZNF73O43830 326 aaPredicted RBP13.76□□□□□ -0.21
SPHK1-202ENST00000392496 LINC00575Q6W349 94 aa13.76□□□□□ -0.21
SPHK1-202ENST00000392496 TRBV7-6A0A0J9YX20 115 aa13.75□□□□□ -0.21
SPHK1-202ENST00000392496 TEX49A0A1B0GTD5 131 aa13.75□□□□□ -0.21
SPHK1-202ENST00000392496 M0R2N4 97 aa13.74□□□□□ -0.21
SPHK1-202ENST00000392496 VPS25Q9BRG1 176 aa13.73□□□□□ -0.21
SPHK1-202ENST00000392496 C7orf33Q8WU49 177 aa13.73□□□□□ -0.21
SPHK1-202ENST00000392496 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
SPHK1-202ENST00000392496 Q6ZR54 194 aa13.72□□□□□ -0.21
SPHK1-202ENST00000392496 ORMDL1Q9P0S3 153 aa13.72□□□□□ -0.21
SPHK1-202ENST00000392496 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.71□□□□□ -0.21
SPHK1-202ENST00000392496 C16orf90A8MZG2 172 aa13.71□□□□□ -0.22
SPHK1-202ENST00000392496 hADV29S1A0JD25 119 aa13.7□□□□□ -0.22
SPHK1-202ENST00000392496 FAM168BA1KXE4 195 aa13.7□□□□□ -0.22
SPHK1-202ENST00000392496 LY6G6CO95867 125 aa13.7□□□□□ -0.22
SPHK1-202ENST00000392496 COX7BP24311 80 aa13.7□□□□□ -0.22
SPHK1-202ENST00000392496 KCNQ1DNQ9H478 68 aa13.7□□□□□ -0.22
SPHK1-202ENST00000392496 ELOF1P60002 83 aaKnown RBP13.69□□□□□ -0.22
SPHK1-202ENST00000392496 KRTAP7-1Q8IUC3 87 aa13.68□□□□□ -0.22
SPHK1-202ENST00000392496 PKIGQ9Y2B9 76 aa13.68□□□□□ -0.22
SPHK1-202ENST00000392496 A0A096LNI7 61 aa13.67□□□□□ -0.22
SPHK1-202ENST00000392496 C9orf163Q8N9P6 203 aa13.67□□□□□ -0.22
SPHK1-202ENST00000392496 LINC00476Q8WZB0 136 aa13.67□□□□□ -0.22
SPHK1-202ENST00000392496 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
SPHK1-202ENST00000392496 IGLV1-50A0A075B6I6 118 aa13.64□□□□□ -0.23
SPHK1-202ENST00000392496 MRPL55Q7Z7F7 128 aaKnown RBP13.64□□□□□ -0.23
SPHK1-202ENST00000392496 TMEM256-PLSCR3K7ERE1 68 aa13.63□□□□□ -0.23
SPHK1-202ENST00000392496 PRYO14603 147 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms