RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 H0YGX0 51 aa12.8□□□□□ -0.36
GMDS-201ENST00000380805 UPK3BQ9BT76 320 aa12.79□□□□□ -0.36
GMDS-201ENST00000380805 ZNF561-AS1K7EIQ3 104 aa12.78□□□□□ -0.36
GMDS-201ENST00000380805 Q8NDZ9 215 aa12.77□□□□□ -0.36
GMDS-201ENST00000380805 OR13C6PQ8NH95 151 aa12.77□□□□□ -0.36
GMDS-201ENST00000380805 TMEM126AQ9H061 195 aa12.77□□□□□ -0.36
GMDS-201ENST00000380805 TGP01266 2768 aa12.77□□□□□ -0.37
GMDS-201ENST00000380805 CAMK2N2Q96S95 79 aa12.76□□□□□ -0.37
GMDS-201ENST00000380805 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
GMDS-201ENST00000380805 HIGD2BQ4VC39 106 aa12.75□□□□□ -0.37
GMDS-201ENST00000380805 PRR3P79522 188 aaKnown RBP12.74□□□□□ -0.37
GMDS-201ENST00000380805 TEX49A0A1B0GTD5 131 aa12.74□□□□□ -0.37
GMDS-201ENST00000380805 DNAH1Q9P2D7 4330 aa12.73□□□□□ -0.37
GMDS-201ENST00000380805 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
GMDS-201ENST00000380805 Q6ZRU5 148 aa12.72□□□□□ -0.37
GMDS-201ENST00000380805 A0A087WYN8 130 aa12.71□□□□□ -0.37
GMDS-201ENST00000380805 CDIP1Q9H305 208 aa12.71□□□□□ -0.38
GMDS-201ENST00000380805 A0A1B0GX51 115 aa12.7□□□□□ -0.38
GMDS-201ENST00000380805 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
GMDS-201ENST00000380805 NCR3O14931 201 aa12.69□□□□□ -0.38
GMDS-201ENST00000380805 IGLV6-57P01721 117 aa12.69□□□□□ -0.38
GMDS-201ENST00000380805 NDUFC2-KCTD14E9PQ53 114 aa12.68□□□□□ -0.38
GMDS-201ENST00000380805 BAALC-AS2P0C853 105 aa12.68□□□□□ -0.38
GMDS-201ENST00000380805 Q9HAA7 133 aa12.68□□□□□ -0.38
GMDS-201ENST00000380805 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
GMDS-201ENST00000380805 RMI2Q96E14 147 aa12.68□□□□□ -0.38
GMDS-201ENST00000380805 LINC00167Q96N53 147 aa12.67□□□□□ -0.38
GMDS-201ENST00000380805 DNAL4O96015 105 aa12.66□□□□□ -0.38
GMDS-201ENST00000380805 SYCNQ0VAF6 134 aa12.65□□□□□ -0.38
GMDS-201ENST00000380805 S100A7L2Q5SY68 101 aa12.65□□□□□ -0.38
GMDS-201ENST00000380805 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
GMDS-201ENST00000380805 DYNC2H1Q8NCM8 4307 aaKnown RBP12.65□□□□□ -0.38
GMDS-201ENST00000380805 LECT2O14960 151 aa12.65□□□□□ -0.38
GMDS-201ENST00000380805 XAGE1AQ9HD64 81 aa12.65□□□□□ -0.38
GMDS-201ENST00000380805 FAM240AA0A1B0GVK7 77 aa12.63□□□□□ -0.39
GMDS-201ENST00000380805 VPREB1P12018 145 aa12.63□□□□□ -0.39
GMDS-201ENST00000380805 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
GMDS-201ENST00000380805 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
GMDS-201ENST00000380805 APLNQ9ULZ1 77 aa12.62□□□□□ -0.39
GMDS-201ENST00000380805 C6orf99Q4VX62 202 aa12.62□□□□□ -0.39
GMDS-201ENST00000380805 DNAH7Q8WXX0 4024 aa12.61□□□□□ -0.39
GMDS-201ENST00000380805 USP17L23D6RBM5 183 aa12.6□□□□□ -0.39
GMDS-201ENST00000380805 Q6ZRP5 223 aa12.6□□□□□ -0.39
GMDS-201ENST00000380805 Q8N814 137 aa12.6□□□□□ -0.39
GMDS-201ENST00000380805 PCP4P48539 62 aa12.59□□□□□ -0.39
GMDS-201ENST00000380805 TRBV10-3A0A0K0K1G6 114 aa12.58□□□□□ -0.4
GMDS-201ENST00000380805 CASC10Q5T4H9 136 aa12.58□□□□□ -0.4
GMDS-201ENST00000380805 OBSCN-AS1Q96MR7 158 aa12.58□□□□□ -0.4
GMDS-201ENST00000380805 ORMDL1Q9P0S3 153 aa12.57□□□□□ -0.4
GMDS-201ENST00000380805 M0R378 163 aa12.57□□□□□ -0.4
GMDS-201ENST00000380805 SLPIP03973 132 aa12.57□□□□□ -0.4
GMDS-201ENST00000380805 INAFM2P0DMQ5 153 aa12.57□□□□□ -0.4
GMDS-201ENST00000380805 LINC00575Q6W349 94 aa12.57□□□□□ -0.4
GMDS-201ENST00000380805 TRAV23DV6A0A075B6W5 121 aa12.56□□□□□ -0.4
GMDS-201ENST00000380805 SCGB1A1P11684 91 aa12.56□□□□□ -0.4
GMDS-201ENST00000380805 XGP55808 180 aa12.56□□□□□ -0.4
GMDS-201ENST00000380805 C9orf129Q5T035 196 aaKnown RBP12.55□□□□□ -0.4
GMDS-201ENST00000380805 TRBV7-6A0A0J9YX20 115 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 PLA2G2DQ9UNK4 145 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 SNCGO76070 127 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 ACYP1P07311 99 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 KRTAP1-5Q9BYS1 174 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
GMDS-201ENST00000380805 CSMD3Q7Z407 3707 aa12.53□□□□□ -0.4
GMDS-201ENST00000380805 DIRC1Q969H9 104 aa12.52□□□□□ -0.41
GMDS-201ENST00000380805 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
GMDS-201ENST00000380805 ZNF73O43830 326 aaPredicted RBP12.51□□□□□ -0.41
GMDS-201ENST00000380805 MT-ATP8P03928 68 aa12.51□□□□□ -0.41
GMDS-201ENST00000380805 TMEM256-PLSCR3K7ERE1 68 aa12.5□□□□□ -0.41
GMDS-201ENST00000380805 hADV29S1A0JD25 119 aa12.49□□□□□ -0.41
GMDS-201ENST00000380805 UBE2DNLQ8IWF7 75 aa12.49□□□□□ -0.41
GMDS-201ENST00000380805 IGLV5-37A0A075B6J1 123 aa12.48□□□□□ -0.41
GMDS-201ENST00000380805 ELOF1P60002 83 aaKnown RBP12.48□□□□□ -0.41
GMDS-201ENST00000380805 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
GMDS-201ENST00000380805 WWC2-AS2Q96NR7 200 aa12.47□□□□□ -0.41
GMDS-201ENST00000380805 SERTAD4-AS1Q5TG53 156 aa12.45□□□□□ -0.42
GMDS-201ENST00000380805 H3BQ85 93 aa12.45□□□□□ -0.42
GMDS-201ENST00000380805 COX7BP24311 80 aa12.45□□□□□ -0.42
GMDS-201ENST00000380805 STARD9Q9P2P6 4700 aa12.44□□□□□ -0.42
GMDS-201ENST00000380805 JMJD7-PLA2G4BH0Y9G9 81 aa12.44□□□□□ -0.42
GMDS-201ENST00000380805 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
GMDS-201ENST00000380805 CNBPP62633 177 aaKnown RBP12.43□□□□□ -0.42
GMDS-201ENST00000380805 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
GMDS-201ENST00000380805 LOC107984640A0A0U1RRK4 108 aa12.42□□□□□ -0.42
GMDS-201ENST00000380805 NKAPP1Q8N9T2 125 aa12.42□□□□□ -0.42
GMDS-201ENST00000380805 LINC00528Q8N1L1 170 aa12.42□□□□□ -0.42
GMDS-201ENST00000380805 C7orf33Q8WU49 177 aa12.42□□□□□ -0.42
GMDS-201ENST00000380805 C14orf132Q9NPU4 83 aa12.42□□□□□ -0.42
GMDS-201ENST00000380805 TTC32Q5I0X7 151 aa12.41□□□□□ -0.42
GMDS-201ENST00000380805 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.41□□□□□ -0.42
GMDS-201ENST00000380805 LYSTQ99698 3801 aa12.39□□□□□ -0.43
GMDS-201ENST00000380805 Q6ZQY7 126 aa12.39□□□□□ -0.43
GMDS-201ENST00000380805 KRTAP7-1Q8IUC3 87 aa12.39□□□□□ -0.43
GMDS-201ENST00000380805 C14orf177Q52M58 125 aa12.38□□□□□ -0.43
GMDS-201ENST00000380805 GAGE2AQ6NT46 116 aa12.38□□□□□ -0.43
GMDS-201ENST00000380805 Q6Q795 121 aa12.38□□□□□ -0.43
GMDS-201ENST00000380805 NBDYA0A0U1RRE5 68 aa12.37□□□□□ -0.43
GMDS-201ENST00000380805 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
GMDS-201ENST00000380805 TENM2Q9NT68 2774 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms