RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 LY6G6DO95868 133 aa6.16□□□□□ -1.42
LIG3-202ENST00000378526 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
LIG3-202ENST00000378526 A8MTW9 85 aa6.15□□□□□ -1.42
LIG3-202ENST00000378526 C9orf129Q5T035 196 aaKnown RBP6.15□□□□□ -1.42
LIG3-202ENST00000378526 MUC6Q6W4X9 2439 aa6.15□□□□□ -1.42
LIG3-202ENST00000378526 GRNP28799 593 aaKnown RBP6.15□□□□□ -1.43
LIG3-202ENST00000378526 LTBP2Q14767 1821 aa6.15□□□□□ -1.43
LIG3-202ENST00000378526 TLN1Q9Y490 2541 aaKnown RBP6.14□□□□□ -1.43
LIG3-202ENST00000378526 C8orf17Q9NRJ1 99 aa6.14□□□□□ -1.43
LIG3-202ENST00000378526 POLQO75417 2590 aa6.14□□□□□ -1.43
LIG3-202ENST00000378526 LINC00483Q53H64 154 aa6.14□□□□□ -1.43
LIG3-202ENST00000378526 IGLV4-60A0A075B6I1 120 aa6.14□□□□□ -1.43
LIG3-202ENST00000378526 Q6YL49 198 aa6.14□□□□□ -1.43
LIG3-202ENST00000378526 SMCR5Q8TEV8 140 aa6.13□□□□□ -1.43
LIG3-202ENST00000378526 TLN2Q9Y4G6 2542 aa6.13□□□□□ -1.43
LIG3-202ENST00000378526 IGFL2Q6UWQ7 119 aa6.12□□□□□ -1.43
LIG3-202ENST00000378526 LINC01006Q8NI28 216 aa6.12□□□□□ -1.43
LIG3-202ENST00000378526 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
LIG3-202ENST00000378526 ZNF580Q9UK33 172 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 LINC00476Q8WZB0 136 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 NOTCH2Q04721 2471 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
LIG3-202ENST00000378526 FBXL19-AS1Q494R0 122 aa6.1□□□□□ -1.43
LIG3-202ENST00000378526 ZFYVE26Q68DK2 2539 aa6.1□□□□□ -1.43
LIG3-202ENST00000378526 Q75L30 129 aa6.1□□□□□ -1.43
LIG3-202ENST00000378526 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
LIG3-202ENST00000378526 Q6ZPA2 131 aa6.09□□□□□ -1.43
LIG3-202ENST00000378526 Q6ZRX8 168 aa6.09□□□□□ -1.43
LIG3-202ENST00000378526 KIF25-AS1Q9Y6Z4 181 aa6.09□□□□□ -1.43
LIG3-202ENST00000378526 C22orf24Q9Y442 160 aa6.09□□□□□ -1.44
LIG3-202ENST00000378526 PIEZO1Q92508 2521 aa6.08□□□□□ -1.44
LIG3-202ENST00000378526 Q6ZRU5 148 aa6.08□□□□□ -1.44
LIG3-202ENST00000378526 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
LIG3-202ENST00000378526 PLA2G5P39877 138 aa6.07□□□□□ -1.44
LIG3-202ENST00000378526 K7EQZ3 153 aa6.07□□□□□ -1.44
LIG3-202ENST00000378526 IGLV1-40P01703 118 aa6.06□□□□□ -1.44
LIG3-202ENST00000378526 J3QKU1 62 aa6.06□□□□□ -1.44
LIG3-202ENST00000378526 U3KQA8 63 aa6.06□□□□□ -1.44
LIG3-202ENST00000378526 COL4A1P02462 1669 aa6.05□□□□□ -1.44
LIG3-202ENST00000378526 C1orf229Q6ZS94 237 aaPredicted RBP6.05□□□□□ -1.44
LIG3-202ENST00000378526 IGHV3OR16-9A0A0B4J2B5 98 aa6.05□□□□□ -1.44
LIG3-202ENST00000378526 THSD7BQ9C0I4 1608 aa6.05□□□□□ -1.44
LIG3-202ENST00000378526 CDSNQ15517 529 aa6.04□□□□□ -1.44
LIG3-202ENST00000378526 SPACA4Q8TDM5 124 aa6.04□□□□□ -1.44
LIG3-202ENST00000378526 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
LIG3-202ENST00000378526 LMO4P61968 165 aa6.04□□□□□ -1.44
LIG3-202ENST00000378526 CRIP3Q6Q6R5 217 aa6.02□□□□□ -1.44
LIG3-202ENST00000378526 BRI3O95415 125 aa6.02□□□□□ -1.45
LIG3-202ENST00000378526 COL4A3Q01955 1670 aa6.02□□□□□ -1.45
LIG3-202ENST00000378526 FHL3Q13643 280 aa6.02□□□□□ -1.45
LIG3-202ENST00000378526 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
LIG3-202ENST00000378526 IGLV6-57P01721 117 aa6.01□□□□□ -1.45
LIG3-202ENST00000378526 M0R2N4 97 aa6.01□□□□□ -1.45
LIG3-202ENST00000378526 LINC00167Q96N53 147 aa6.01□□□□□ -1.45
LIG3-202ENST00000378526 Q6ZRP5 223 aa6.01□□□□□ -1.45
LIG3-202ENST00000378526 ZFHX2Q9C0A1 2572 aaPredicted RBP6.01□□□□□ -1.45
LIG3-202ENST00000378526 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
LIG3-202ENST00000378526 RPL37AP61513 92 aaKnown RBP6□□□□□ -1.45
LIG3-202ENST00000378526 Q96NJ1 140 aa6□□□□□ -1.45
LIG3-202ENST00000378526 MUC22E2RYF6 1773 aaPredicted RBP5.99□□□□□ -1.45
LIG3-202ENST00000378526 PKD1L2Q7Z442 2459 aa5.99□□□□□ -1.45
LIG3-202ENST00000378526 ADORA2A-AS1P86434 159 aa5.99□□□□□ -1.45
LIG3-202ENST00000378526 COL4A5P29400 1685 aa5.98□□□□□ -1.45
LIG3-202ENST00000378526 LY6G6CO95867 125 aa5.97□□□□□ -1.45
LIG3-202ENST00000378526 GVQW2A0A096LPI5 108 aaPredicted RBP5.97□□□□□ -1.45
LIG3-202ENST00000378526 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
LIG3-202ENST00000378526 A0A1B0GVX0 72 aa5.96□□□□□ -1.45
LIG3-202ENST00000378526 PLA2G2CQ5R387 149 aa5.96□□□□□ -1.46
LIG3-202ENST00000378526 Q6ZSN1 163 aa5.96□□□□□ -1.46
LIG3-202ENST00000378526 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
LIG3-202ENST00000378526 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
LIG3-202ENST00000378526 PIEZO2Q9H5I5 2752 aa5.95□□□□□ -1.46
LIG3-202ENST00000378526 C16orf90A8MZG2 172 aa5.94□□□□□ -1.46
LIG3-202ENST00000378526 TLX1NBP0CAT3 122 aa5.94□□□□□ -1.46
LIG3-202ENST00000378526 ODF3L2Q3SX64 289 aa5.94□□□□□ -1.46
LIG3-202ENST00000378526 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
LIG3-202ENST00000378526 SETD2Q9BYW2 2564 aaPredicted RBP5.93□□□□□ -1.46
LIG3-202ENST00000378526 COL4A6Q14031 1691 aa5.93□□□□□ -1.46
LIG3-202ENST00000378526 Q5XG85 94 aa5.93□□□□□ -1.46
LIG3-202ENST00000378526 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
LIG3-202ENST00000378526 IGLV1-51P01701 117 aa5.93□□□□□ -1.46
LIG3-202ENST00000378526 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
LIG3-202ENST00000378526 ANKRD17O75179 2603 aaKnown RBP5.92□□□□□ -1.46
LIG3-202ENST00000378526 ABCA12Q86UK0 2595 aa5.91□□□□□ -1.46
LIG3-202ENST00000378526 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
LIG3-202ENST00000378526 H3BNG1 76 aa5.91□□□□□ -1.46
LIG3-202ENST00000378526 LITAFQ99732 161 aa5.91□□□□□ -1.46
LIG3-202ENST00000378526 A0A0D9SG42 100 aa5.91□□□□□ -1.46
LIG3-202ENST00000378526 C10orf99Q6UWK7 81 aa5.91□□□□□ -1.46
LIG3-202ENST00000378526 LINC00588Q9Y4M8 146 aa5.9□□□□□ -1.46
LIG3-202ENST00000378526 A0A1B0GU33 70 aa5.9□□□□□ -1.46
LIG3-202ENST00000378526 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
LIG3-202ENST00000378526 NCOR2Q9Y618 2525 aa5.89□□□□□ -1.47
LIG3-202ENST00000378526 NAV2Q8IVL1 2488 aa5.89□□□□□ -1.47
LIG3-202ENST00000378526 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
LIG3-202ENST00000378526 OCR1Q9BZK8 76 aa5.88□□□□□ -1.47
LIG3-202ENST00000378526 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms