RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 Q8IZM0 81 aa9.95□□□□□ -0.82
TNFRSF1B-201ENST00000376259 Q8N814 137 aa9.95□□□□□ -0.82
TNFRSF1B-201ENST00000376259 SPATA3Q8NHX4 192 aa9.95□□□□□ -0.82
TNFRSF1B-201ENST00000376259 TRBV7-7A0A0K0K1E9 115 aa9.94□□□□□ -0.82
TNFRSF1B-201ENST00000376259 LY6G6DO95868 133 aa9.94□□□□□ -0.82
TNFRSF1B-201ENST00000376259 SNURFQ9Y675 71 aa9.94□□□□□ -0.82
TNFRSF1B-201ENST00000376259 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
TNFRSF1B-201ENST00000376259 NKAPP1Q8N9T2 125 aa9.92□□□□□ -0.82
TNFRSF1B-201ENST00000376259 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
TNFRSF1B-201ENST00000376259 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
TNFRSF1B-201ENST00000376259 TRBV10-3A0A0K0K1G6 114 aa9.92□□□□□ -0.82
TNFRSF1B-201ENST00000376259 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
TNFRSF1B-201ENST00000376259 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
TNFRSF1B-201ENST00000376259 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
TNFRSF1B-201ENST00000376259 X6R8D5 127 aa9.89□□□□□ -0.83
TNFRSF1B-201ENST00000376259 VWFP04275 2813 aa9.89□□□□□ -0.83
TNFRSF1B-201ENST00000376259 KIR2DL5BQ8NHK3 375 aa9.89□□□□□ -0.83
TNFRSF1B-201ENST00000376259 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
TNFRSF1B-201ENST00000376259 LYRM9A8MSI8 78 aa9.88□□□□□ -0.83
TNFRSF1B-201ENST00000376259 CCKP06307 115 aa9.88□□□□□ -0.83
TNFRSF1B-201ENST00000376259 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
TNFRSF1B-201ENST00000376259 J3KT08 172 aa9.88□□□□□ -0.83
TNFRSF1B-201ENST00000376259 IGHV4-30-4P0DP06 118 aa9.88□□□□□ -0.83
TNFRSF1B-201ENST00000376259 WFDC10BQ8IUB3 73 aa9.87□□□□□ -0.83
TNFRSF1B-201ENST00000376259 COX7BP24311 80 aa9.87□□□□□ -0.83
TNFRSF1B-201ENST00000376259 NSD1Q96L73 2696 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1B-201ENST00000376259 Q8N9L7 120 aa9.87□□□□□ -0.83
TNFRSF1B-201ENST00000376259 KRTAP1-3Q8IUG1 177 aa9.86□□□□□ -0.83
TNFRSF1B-201ENST00000376259 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
TNFRSF1B-201ENST00000376259 IL17DQ8TAD2 202 aa9.86□□□□□ -0.83
TNFRSF1B-201ENST00000376259 KPRPQ5T749 579 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1B-201ENST00000376259 Q6JHZ5 121 aa9.85□□□□□ -0.83
TNFRSF1B-201ENST00000376259 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
TNFRSF1B-201ENST00000376259 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
TNFRSF1B-201ENST00000376259 PDZD2O15018 2839 aa9.83□□□□□ -0.84
TNFRSF1B-201ENST00000376259 KRTAP10-3P60369 221 aa9.83□□□□□ -0.84
TNFRSF1B-201ENST00000376259 Q6ZTC4 211 aa9.83□□□□□ -0.84
TNFRSF1B-201ENST00000376259 ZNF73O43830 326 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1B-201ENST00000376259 NREPQ16612 68 aa9.82□□□□□ -0.84
TNFRSF1B-201ENST00000376259 LELP1Q5T871 98 aa9.81□□□□□ -0.84
TNFRSF1B-201ENST00000376259 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
TNFRSF1B-201ENST00000376259 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1B-201ENST00000376259 UBE2BP63146 152 aa9.81□□□□□ -0.84
TNFRSF1B-201ENST00000376259 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1B-201ENST00000376259 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
TNFRSF1B-201ENST00000376259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1B-201ENST00000376259 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
TNFRSF1B-201ENST00000376259 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
TNFRSF1B-201ENST00000376259 M0R2N4 97 aa9.8□□□□□ -0.84
TNFRSF1B-201ENST00000376259 MIFP14174 115 aa9.79□□□□□ -0.84
TNFRSF1B-201ENST00000376259 TENM1Q9UKZ4 2725 aa9.78□□□□□ -0.84
TNFRSF1B-201ENST00000376259 C22orf24Q9Y442 160 aa9.78□□□□□ -0.84
TNFRSF1B-201ENST00000376259 A0A096LNI7 61 aa9.78□□□□□ -0.84
TNFRSF1B-201ENST00000376259 C16orf95Q9H693 158 aa9.78□□□□□ -0.84
TNFRSF1B-201ENST00000376259 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.84
TNFRSF1B-201ENST00000376259 Q6ZRU5 148 aa9.77□□□□□ -0.84
TNFRSF1B-201ENST00000376259 ETDCA0A1B0GVM5 59 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 OTOGQ6ZRI0 2925 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 Q6ZVQ6 151 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 CYSTM1Q9H1C7 97 aa9.77□□□□□ -0.85
TNFRSF1B-201ENST00000376259 COX17Q14061 63 aa9.76□□□□□ -0.85
TNFRSF1B-201ENST00000376259 Q8NDZ9 215 aa9.76□□□□□ -0.85
TNFRSF1B-201ENST00000376259 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
TNFRSF1B-201ENST00000376259 PSCAO43653 123 aa9.76□□□□□ -0.85
TNFRSF1B-201ENST00000376259 FAM19A3Q7Z5A8 133 aa9.75□□□□□ -0.85
TNFRSF1B-201ENST00000376259 RMI2Q96E14 147 aa9.75□□□□□ -0.85
TNFRSF1B-201ENST00000376259 A0A0J9YWU9 116 aa9.74□□□□□ -0.85
TNFRSF1B-201ENST00000376259 LINC01547P58512 204 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1B-201ENST00000376259 SYCNQ0VAF6 134 aa9.74□□□□□ -0.85
TNFRSF1B-201ENST00000376259 C11orf45Q8TAV5 145 aa9.74□□□□□ -0.85
TNFRSF1B-201ENST00000376259 PRR4Q16378 134 aa9.73□□□□□ -0.85
TNFRSF1B-201ENST00000376259 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 BPY2O14599 106 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 NDUFC2O95298 119 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 KRTAP1-1Q07627 177 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 MPLKIPQ8TAP9 179 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
TNFRSF1B-201ENST00000376259 F8WEM9 126 aa9.71□□□□□ -0.85
TNFRSF1B-201ENST00000376259 HIGD2AQ9BW72 106 aa9.71□□□□□ -0.86
TNFRSF1B-201ENST00000376259 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1B-201ENST00000376259 LRCOL1A6NCL2 159 aa9.7□□□□□ -0.86
TNFRSF1B-201ENST00000376259 TMEM258P61165 79 aa9.7□□□□□ -0.86
TNFRSF1B-201ENST00000376259 DEFB116Q30KQ4 102 aa9.7□□□□□ -0.86
TNFRSF1B-201ENST00000376259 FUSP35637 526 aaKnown RBP eCLIP9.69□□□□□ -0.86
TNFRSF1B-201ENST00000376259 Q8NAQ8 132 aa9.69□□□□□ -0.86
TNFRSF1B-201ENST00000376259 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
TNFRSF1B-201ENST00000376259 FBN1P35555 2871 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1B-201ENST00000376259 CRYGAP11844 174 aa9.68□□□□□ -0.86
TNFRSF1B-201ENST00000376259 ATP5EP2Q5VTU8 51 aa9.68□□□□□ -0.86
TNFRSF1B-201ENST00000376259 M0R378 163 aa9.68□□□□□ -0.86
TNFRSF1B-201ENST00000376259 ESRGQ1W209 222 aa9.67□□□□□ -0.86
TNFRSF1B-201ENST00000376259 C4orf26Q17RF5 130 aa9.67□□□□□ -0.86
TNFRSF1B-201ENST00000376259 Q6ZQT0 140 aa9.67□□□□□ -0.86
TNFRSF1B-201ENST00000376259 PKD1L1Q8TDX9 2849 aa9.67□□□□□ -0.86
TNFRSF1B-201ENST00000376259 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms