RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 HSD52Q0P140 79 aa14.61□□□□□ -0.07
HLA-C-202ENST00000376237 SOSTDC1Q6X4U4 206 aa14.61□□□□□ -0.07
HLA-C-202ENST00000376237 PKD1P98161 4303 aa14.61□□□□□ -0.07
HLA-C-202ENST00000376237 DNAH11Q96DT5 4516 aa14.61□□□□□ -0.07
HLA-C-202ENST00000376237 CHTF8P0CG12 524 aa14.61□□□□□ -0.07
HLA-C-202ENST00000376237 PLA2G2DQ9UNK4 145 aa14.61□□□□□ -0.07
HLA-C-202ENST00000376237 KRTAP10-1P60331 282 aa14.6□□□□□ -0.07
HLA-C-202ENST00000376237 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
HLA-C-202ENST00000376237 SPACA4Q8TDM5 124 aa14.6□□□□□ -0.07
HLA-C-202ENST00000376237 EIF4EBP3O60516 100 aaPredicted RBP14.59□□□□□ -0.07
HLA-C-202ENST00000376237 DDTP30046 118 aa14.59□□□□□ -0.07
HLA-C-202ENST00000376237 DPH3Q96FX2 82 aa14.59□□□□□ -0.07
HLA-C-202ENST00000376237 NDUFC2O95298 119 aa14.58□□□□□ -0.08
HLA-C-202ENST00000376237 CEND1Q8N111 149 aa14.58□□□□□ -0.08
HLA-C-202ENST00000376237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.58□□□□□ -0.08
HLA-C-202ENST00000376237 HECTD4Q9Y4D8 3996 aa14.57□□□□□ -0.08
HLA-C-202ENST00000376237 Q6ZSA8 131 aa14.56□□□□□ -0.08
HLA-C-202ENST00000376237 PANO1I0J062 215 aa14.56□□□□□ -0.08
HLA-C-202ENST00000376237 CTAG1AP78358 180 aa14.56□□□□□ -0.08
HLA-C-202ENST00000376237 VPREB1P12018 145 aa14.54□□□□□ -0.08
HLA-C-202ENST00000376237 IGLV5-37A0A075B6J1 123 aa14.52□□□□□ -0.08
HLA-C-202ENST00000376237 TMEM238LA0A1B0GVL6 79 aa14.52□□□□□ -0.08
HLA-C-202ENST00000376237 A0A1W2PNN7 141 aa14.52□□□□□ -0.08
HLA-C-202ENST00000376237 A4D1N5 150 aa14.52□□□□□ -0.08
HLA-C-202ENST00000376237 A6NJY4 79 aa14.52□□□□□ -0.08
HLA-C-202ENST00000376237 SERTAD4-AS1Q5TG53 156 aa14.52□□□□□ -0.08
HLA-C-202ENST00000376237 A0A087WYN8 130 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 FAM168BA1KXE4 195 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 FAM30AQ9NZY2 134 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 EPM2AB3EWF7 344 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 FAM19A5Q7Z5A7 132 aaPredicted RBP14.51□□□□□ -0.09
HLA-C-202ENST00000376237 NKAPP1Q8N9T2 125 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 Q8NDZ9 215 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 PLAC8Q9NZF1 115 aa14.51□□□□□ -0.09
HLA-C-202ENST00000376237 M0R143 59 aa14.5□□□□□ -0.09
HLA-C-202ENST00000376237 TRBV10-2A0A0K0K1G8 114 aa14.49□□□□□ -0.09
HLA-C-202ENST00000376237 KRTAP7-1Q8IUC3 87 aa14.49□□□□□ -0.09
HLA-C-202ENST00000376237 FXYD2P54710 66 aa14.48□□□□□ -0.09
HLA-C-202ENST00000376237 C22orf24Q9Y442 160 aa14.48□□□□□ -0.09
HLA-C-202ENST00000376237 EPPK1P58107 5090 aaKnown RBP14.48□□□□□ -0.09
HLA-C-202ENST00000376237 DNAH5Q8TE73 4624 aa14.47□□□□□ -0.09
HLA-C-202ENST00000376237 M0R378 163 aa14.47□□□□□ -0.09
HLA-C-202ENST00000376237 PRR3P79522 188 aaKnown RBP14.46□□□□□ -0.09
HLA-C-202ENST00000376237 BVES-AS1Q5T3Y7 98 aa14.46□□□□□ -0.09
HLA-C-202ENST00000376237 IGKV2-28A0A075B6P5 120 aa14.46□□□□□ -0.1
HLA-C-202ENST00000376237 PCP4L1A6NKN8 68 aa14.46□□□□□ -0.1
HLA-C-202ENST00000376237 M0QXV9 152 aa14.46□□□□□ -0.1
HLA-C-202ENST00000376237 IGKV2D-28P01615 120 aa14.46□□□□□ -0.1
HLA-C-202ENST00000376237 LBHQ53QV2 105 aaPredicted RBP14.46□□□□□ -0.1
HLA-C-202ENST00000376237 HINT1P49773 126 aaPredicted RBP14.45□□□□□ -0.1
HLA-C-202ENST00000376237 MRPL55Q7Z7F7 128 aaKnown RBP14.45□□□□□ -0.1
HLA-C-202ENST00000376237 CIRBP-AS1Q8TBR5 109 aa14.45□□□□□ -0.1
HLA-C-202ENST00000376237 NCR3O14931 201 aa14.44□□□□□ -0.1
HLA-C-202ENST00000376237 TRAV13-2A0A0B4J235 113 aa14.43□□□□□ -0.1
HLA-C-202ENST00000376237 SCXQ7RTU7 201 aa14.43□□□□□ -0.1
HLA-C-202ENST00000376237 A0A0B4J2C4 111 aa14.41□□□□□ -0.1
HLA-C-202ENST00000376237 CFC1BP0CG36 223 aa14.41□□□□□ -0.1
HLA-C-202ENST00000376237 CFC1P0CG37 223 aa14.41□□□□□ -0.1
HLA-C-202ENST00000376237 S100A7L2Q5SY68 101 aa14.41□□□□□ -0.1
HLA-C-202ENST00000376237 C7orf33Q8WU49 177 aa14.41□□□□□ -0.1
HLA-C-202ENST00000376237 TMEM126AQ9H061 195 aa14.41□□□□□ -0.1
HLA-C-202ENST00000376237 LINC00337Q8N6G1 96 aa14.4□□□□□ -0.1
HLA-C-202ENST00000376237 RAB37Q96AX2 223 aa14.4□□□□□ -0.1
HLA-C-202ENST00000376237 LINC00167Q96N53 147 aa14.4□□□□□ -0.1
HLA-C-202ENST00000376237 NHP2Q9NX24 153 aaKnown RBP14.4□□□□□ -0.1
HLA-C-202ENST00000376237 PKHD1P08F94 4074 aa14.39□□□□□ -0.11
HLA-C-202ENST00000376237 A6NDN8 102 aa14.39□□□□□ -0.11
HLA-C-202ENST00000376237 PHF5AQ7RTV0 110 aaKnown RBP14.39□□□□□ -0.11
HLA-C-202ENST00000376237 OR13C6PQ8NH95 151 aa14.39□□□□□ -0.11
HLA-C-202ENST00000376237 A0A1B0GWB2 263 aa14.37□□□□□ -0.11
HLA-C-202ENST00000376237 GAGE10A6NGK3 116 aa14.37□□□□□ -0.11
HLA-C-202ENST00000376237 IGLV6-57P01721 117 aa14.37□□□□□ -0.11
HLA-C-202ENST00000376237 CBY1Q9Y3M2 126 aa14.37□□□□□ -0.11
HLA-C-202ENST00000376237 TRBV10-3A0A0K0K1G6 114 aa14.36□□□□□ -0.11
HLA-C-202ENST00000376237 IGLV1-50A0A075B6I6 118 aa14.35□□□□□ -0.11
HLA-C-202ENST00000376237 XGP55808 180 aa14.35□□□□□ -0.11
HLA-C-202ENST00000376237 UBE2BP63146 152 aa14.35□□□□□ -0.11
HLA-C-202ENST00000376237 PRO1854Q9UHT4 67 aa14.35□□□□□ -0.11
HLA-C-202ENST00000376237 BATFQ16520 125 aa14.34□□□□□ -0.11
HLA-C-202ENST00000376237 BIRC6Q9NR09 4857 aa14.32□□□□□ -0.12
HLA-C-202ENST00000376237 RPL37AP8A6NKH3 93 aa14.32□□□□□ -0.12
HLA-C-202ENST00000376237 LRP1BQ9NZR2 4599 aa14.32□□□□□ -0.12
HLA-C-202ENST00000376237 HAMPP81172 84 aa14.31□□□□□ -0.12
HLA-C-202ENST00000376237 DNAH8Q96JB1 4490 aa14.31□□□□□ -0.12
HLA-C-202ENST00000376237 CDK2AP2O75956 126 aa14.31□□□□□ -0.12
HLA-C-202ENST00000376237 RPL13AP40429 203 aaKnown RBP14.31□□□□□ -0.12
HLA-C-202ENST00000376237 KCNQ1DNQ9H478 68 aa14.31□□□□□ -0.12
HLA-C-202ENST00000376237 DYNC1H1Q14204 4646 aaKnown RBP14.3□□□□□ -0.12
HLA-C-202ENST00000376237 SNHG12Q9BXW3 62 aa14.3□□□□□ -0.12
HLA-C-202ENST00000376237 TRAV23DV6A0A075B6W5 121 aa14.28□□□□□ -0.12
HLA-C-202ENST00000376237 K7ERJ3 54 aa14.28□□□□□ -0.12
HLA-C-202ENST00000376237 PRYO14603 147 aa14.28□□□□□ -0.12
HLA-C-202ENST00000376237 REG3GQ6UW15 175 aa14.25□□□□□ -0.13
HLA-C-202ENST00000376237 SMIM11BQ8TCY0 68 aa14.25□□□□□ -0.13
HLA-C-202ENST00000376237 H7C2G1 150 aa14.24□□□□□ -0.13
HLA-C-202ENST00000376237 KRTAP11-1Q8IUC1 163 aa14.24□□□□□ -0.13
HLA-C-202ENST00000376237 ZNF73O43830 326 aaPredicted RBP14.23□□□□□ -0.13
HLA-C-202ENST00000376237 RPL28P46779 137 aaKnown RBP14.23□□□□□ -0.13
HLA-C-202ENST00000376237 Q1RN00 199 aa14.23□□□□□ -0.13
HLA-C-202ENST00000376237 SPRR1AP35321 89 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms