RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
MSH5-203ENST00000375750 M0R2N4 97 aa10.34□□□□□ -0.75
MSH5-203ENST00000375750 A0A1B0GUV1 79 aa10.33□□□□□ -0.76
MSH5-203ENST00000375750 ENHOQ6UWT2 76 aa10.33□□□□□ -0.76
MSH5-203ENST00000375750 ANK2Q01484 3957 aa10.33□□□□□ -0.76
MSH5-203ENST00000375750 PKD1L1Q8TDX9 2849 aa10.32□□□□□ -0.76
MSH5-203ENST00000375750 SERP2Q8N6R1 65 aa10.32□□□□□ -0.76
MSH5-203ENST00000375750 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
MSH5-203ENST00000375750 LINC00167Q96N53 147 aa10.32□□□□□ -0.76
MSH5-203ENST00000375750 PRO0255Q9UI72 69 aa10.32□□□□□ -0.76
MSH5-203ENST00000375750 UNQ6190/PRO20217Q6UXQ8 127 aa10.31□□□□□ -0.76
MSH5-203ENST00000375750 WIPF1O43516 503 aa10.31□□□□□ -0.76
MSH5-203ENST00000375750 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
MSH5-203ENST00000375750 MAST4O15021 2626 aa10.3□□□□□ -0.76
MSH5-203ENST00000375750 REG3AQ06141 175 aa10.3□□□□□ -0.76
MSH5-203ENST00000375750 CD164L2Q6UWJ8 174 aa10.3□□□□□ -0.76
MSH5-203ENST00000375750 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
MSH5-203ENST00000375750 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
MSH5-203ENST00000375750 DSCR8Q96T75 97 aa10.3□□□□□ -0.76
MSH5-203ENST00000375750 KRTAP10-11P60412 298 aa10.3□□□□□ -0.76
MSH5-203ENST00000375750 APOC4P55056 127 aa10.29□□□□□ -0.76
MSH5-203ENST00000375750 S100A7L2Q5SY68 101 aa10.29□□□□□ -0.76
MSH5-203ENST00000375750 TMEM256-PLSCR3K7ERE1 68 aa10.29□□□□□ -0.76
MSH5-203ENST00000375750 J3KT08 172 aa10.27□□□□□ -0.76
MSH5-203ENST00000375750 OXTP01178 125 aa10.27□□□□□ -0.76
MSH5-203ENST00000375750 GHRHP01286 108 aa10.27□□□□□ -0.76
MSH5-203ENST00000375750 HTN3P15516 51 aa10.27□□□□□ -0.76
MSH5-203ENST00000375750 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
MSH5-203ENST00000375750 SMIM9A6NGZ8 99 aa10.27□□□□□ -0.77
MSH5-203ENST00000375750 JMJD7-PLA2G4BH0Y9G9 81 aa10.27□□□□□ -0.77
MSH5-203ENST00000375750 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
MSH5-203ENST00000375750 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
MSH5-203ENST00000375750 NDUFC2O95298 119 aa10.26□□□□□ -0.77
MSH5-203ENST00000375750 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
MSH5-203ENST00000375750 LAMTOR3Q9UHA4 124 aa10.25□□□□□ -0.77
MSH5-203ENST00000375750 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
MSH5-203ENST00000375750 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
MSH5-203ENST00000375750 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
MSH5-203ENST00000375750 COX17Q14061 63 aa10.23□□□□□ -0.77
MSH5-203ENST00000375750 Q6ZQT0 140 aa10.22□□□□□ -0.77
MSH5-203ENST00000375750 UBL5Q9BZL1 73 aa10.22□□□□□ -0.77
MSH5-203ENST00000375750 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
MSH5-203ENST00000375750 RBM3P98179 157 aaKnown RBP10.21□□□□□ -0.77
MSH5-203ENST00000375750 Q6ZQY7 126 aa10.21□□□□□ -0.77
MSH5-203ENST00000375750 Q8NAQ8 132 aa10.21□□□□□ -0.77
MSH5-203ENST00000375750 DAD1P61803 113 aa10.2□□□□□ -0.78
MSH5-203ENST00000375750 HAMPP81172 84 aa10.2□□□□□ -0.78
MSH5-203ENST00000375750 EGFEM1PQ0D2K5 195 aa10.2□□□□□ -0.78
MSH5-203ENST00000375750 C20orf197Q8N268 126 aa10.2□□□□□ -0.78
MSH5-203ENST00000375750 LYRM9A8MSI8 78 aa10.2□□□□□ -0.78
MSH5-203ENST00000375750 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
MSH5-203ENST00000375750 TRBV10-3A0A0K0K1G6 114 aa10.19□□□□□ -0.78
MSH5-203ENST00000375750 MIFP14174 115 aa10.19□□□□□ -0.78
MSH5-203ENST00000375750 TMEM258P61165 79 aa10.19□□□□□ -0.78
MSH5-203ENST00000375750 SCXQ7RTU7 201 aa10.19□□□□□ -0.78
MSH5-203ENST00000375750 RETNQ9HD89 108 aa10.19□□□□□ -0.78
MSH5-203ENST00000375750 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
MSH5-203ENST00000375750 DNAH3Q8TD57 4116 aa10.17□□□□□ -0.78
MSH5-203ENST00000375750 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
MSH5-203ENST00000375750 IGLV6-57P01721 117 aa10.16□□□□□ -0.78
MSH5-203ENST00000375750 LINC01547P58512 204 aaPredicted RBP10.16□□□□□ -0.78
MSH5-203ENST00000375750 Q6ZVQ6 151 aa10.15□□□□□ -0.78
MSH5-203ENST00000375750 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.78
MSH5-203ENST00000375750 RPS28P62857 69 aaKnown RBP10.15□□□□□ -0.78
MSH5-203ENST00000375750 PRB2P02812 416 aaPredicted RBP10.14□□□□□ -0.79
MSH5-203ENST00000375750 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
MSH5-203ENST00000375750 ATP5EP2Q5VTU8 51 aa10.14□□□□□ -0.79
MSH5-203ENST00000375750 NOTCH1P46531 2555 aa10.14□□□□□ -0.79
MSH5-203ENST00000375750 SPART-AS1P0CW21 52 aa10.14□□□□□ -0.79
MSH5-203ENST00000375750 C4orf26Q17RF5 130 aa10.14□□□□□ -0.79
MSH5-203ENST00000375750 A0A0J9YWU9 116 aa10.12□□□□□ -0.79
MSH5-203ENST00000375750 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
MSH5-203ENST00000375750 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
MSH5-203ENST00000375750 MUC7Q8TAX7 377 aa10.1□□□□□ -0.79
MSH5-203ENST00000375750 LELP1Q5T871 98 aa10.09□□□□□ -0.79
MSH5-203ENST00000375750 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
MSH5-203ENST00000375750 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
MSH5-203ENST00000375750 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
MSH5-203ENST00000375750 RMI2Q96E14 147 aa10.08□□□□□ -0.8
MSH5-203ENST00000375750 MDFIQ99750 246 aa10.08□□□□□ -0.8
MSH5-203ENST00000375750 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
MSH5-203ENST00000375750 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
MSH5-203ENST00000375750 TENM3Q9P273 2699 aa10.07□□□□□ -0.8
MSH5-203ENST00000375750 Q5XG85 94 aa10.07□□□□□ -0.8
MSH5-203ENST00000375750 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
MSH5-203ENST00000375750 Q8N9L7 120 aa10.06□□□□□ -0.8
MSH5-203ENST00000375750 COX7BP24311 80 aa10.06□□□□□ -0.8
MSH5-203ENST00000375750 C5orf47Q569G3 176 aa10.05□□□□□ -0.8
MSH5-203ENST00000375750 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.05□□□□□ -0.8
MSH5-203ENST00000375750 H7BZZ5 65 aa10.04□□□□□ -0.8
MSH5-203ENST00000375750 TM2D3Q9BRN9 247 aa10.04□□□□□ -0.8
MSH5-203ENST00000375750 TRAV7A0A075B6U4 112 aa10.04□□□□□ -0.8
MSH5-203ENST00000375750 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
MSH5-203ENST00000375750 Q6ZRU5 148 aa10.03□□□□□ -0.8
MSH5-203ENST00000375750 VPREB1P12018 145 aa10.03□□□□□ -0.8
MSH5-203ENST00000375750 Q6ZTC4 211 aa10.03□□□□□ -0.8
MSH5-203ENST00000375750 FAM236DA0A1B0GTK5 79 aa10.03□□□□□ -0.8
MSH5-203ENST00000375750 FAM236CP0DP71 79 aa10.03□□□□□ -0.8
MSH5-203ENST00000375750 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
MSH5-203ENST00000375750 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms