RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 USP9XQ93008 2570 aaPredicted RBP7.06□□□□□ -1.28
PTCH1-204ENST00000375290 TLN2Q9Y4G6 2542 aa7.06□□□□□ -1.28
PTCH1-204ENST00000375290 A0A096LNI7 61 aa7.06□□□□□ -1.28
PTCH1-204ENST00000375290 PRR3P79522 188 aaKnown RBP7.06□□□□□ -1.28
PTCH1-204ENST00000375290 PRR15Q8IV56 129 aa7.06□□□□□ -1.28
PTCH1-204ENST00000375290 SERTAD4-AS1Q5TG53 156 aa7.05□□□□□ -1.28
PTCH1-204ENST00000375290 C6orf48Q9UBA6 75 aa7.05□□□□□ -1.28
PTCH1-204ENST00000375290 LRRK2Q5S007 2527 aa7.05□□□□□ -1.28
PTCH1-204ENST00000375290 ANKRD11Q6UB99 2663 aaPredicted RBP7.05□□□□□ -1.28
PTCH1-204ENST00000375290 IGLV9-49A0A0B4J1Y8 123 aa7.04□□□□□ -1.28
PTCH1-204ENST00000375290 KTN1-AS1Q86SY8 53 aa7.04□□□□□ -1.28
PTCH1-204ENST00000375290 A8MWP4 228 aa7.03□□□□□ -1.28
PTCH1-204ENST00000375290 TM2D3Q9BRN9 247 aa7.03□□□□□ -1.28
PTCH1-204ENST00000375290 ABCA12Q86UK0 2595 aa7.03□□□□□ -1.28
PTCH1-204ENST00000375290 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
PTCH1-204ENST00000375290 Q6ZRP5 223 aa7.03□□□□□ -1.28
PTCH1-204ENST00000375290 H7BZZ5 65 aa7.02□□□□□ -1.28
PTCH1-204ENST00000375290 KIAA0087Q14695 138 aa7.02□□□□□ -1.28
PTCH1-204ENST00000375290 Q6ZRU5 148 aa7.02□□□□□ -1.29
PTCH1-204ENST00000375290 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
PTCH1-204ENST00000375290 IGF2RP11717 2491 aa7.02□□□□□ -1.29
PTCH1-204ENST00000375290 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
PTCH1-204ENST00000375290 C22orf24Q9Y442 160 aa7.01□□□□□ -1.29
PTCH1-204ENST00000375290 OBSCN-AS1Q96MR7 158 aa7.01□□□□□ -1.29
PTCH1-204ENST00000375290 SMCR5Q8TEV8 140 aa7.01□□□□□ -1.29
PTCH1-204ENST00000375290 UQCR11O14957 56 aa7□□□□□ -1.29
PTCH1-204ENST00000375290 KCNQ1DNQ9H478 68 aa7□□□□□ -1.29
PTCH1-204ENST00000375290 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
PTCH1-204ENST00000375290 ANKRD17O75179 2603 aaKnown RBP6.99□□□□□ -1.29
PTCH1-204ENST00000375290 Q1T7F1 81 aa6.99□□□□□ -1.29
PTCH1-204ENST00000375290 AVPP01185 164 aa6.99□□□□□ -1.29
PTCH1-204ENST00000375290 C18orf65Q6ZTR6 163 aa6.99□□□□□ -1.29
PTCH1-204ENST00000375290 USP9YO00507 2555 aaPredicted RBP6.98□□□□□ -1.29
PTCH1-204ENST00000375290 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
PTCH1-204ENST00000375290 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
PTCH1-204ENST00000375290 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
PTCH1-204ENST00000375290 PCOTHQ58A44 107 aa6.97□□□□□ -1.29
PTCH1-204ENST00000375290 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.29
PTCH1-204ENST00000375290 EDN2P20800 178 aa6.96□□□□□ -1.3
PTCH1-204ENST00000375290 NANOS2P60321 138 aaKnown RBP6.94□□□□□ -1.3
PTCH1-204ENST00000375290 PKD1L2Q7Z442 2459 aa6.94□□□□□ -1.3
PTCH1-204ENST00000375290 FN1P02751 2386 aaKnown RBP6.94□□□□□ -1.3
PTCH1-204ENST00000375290 CEP295Q9C0D2 2601 aa6.93□□□□□ -1.3
PTCH1-204ENST00000375290 LINC00336Q6ZUF6 198 aa6.93□□□□□ -1.3
PTCH1-204ENST00000375290 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
PTCH1-204ENST00000375290 PRR34Q9NV39 138 aa6.93□□□□□ -1.3
PTCH1-204ENST00000375290 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
PTCH1-204ENST00000375290 LCA10Q71F78 164 aa6.93□□□□□ -1.3
PTCH1-204ENST00000375290 COA5Q86WW8 74 aa6.92□□□□□ -1.3
PTCH1-204ENST00000375290 SETD2Q9BYW2 2564 aaPredicted RBP6.92□□□□□ -1.3
PTCH1-204ENST00000375290 INAFM1C9JVW0 142 aa6.92□□□□□ -1.3
PTCH1-204ENST00000375290 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
PTCH1-204ENST00000375290 IGLV5-52A0A0A0MRZ9 124 aa6.91□□□□□ -1.3
PTCH1-204ENST00000375290 DNAH10OSP0CZ25 163 aa6.91□□□□□ -1.3
PTCH1-204ENST00000375290 PRLHP81277 87 aa6.9□□□□□ -1.31
PTCH1-204ENST00000375290 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
PTCH1-204ENST00000375290 ZFYVE26Q68DK2 2539 aa6.89□□□□□ -1.31
PTCH1-204ENST00000375290 F8P00451 2351 aa6.89□□□□□ -1.31
PTCH1-204ENST00000375290 LINC00313P59037 77 aa6.88□□□□□ -1.31
PTCH1-204ENST00000375290 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
PTCH1-204ENST00000375290 X6R8D5 127 aa6.88□□□□□ -1.31
PTCH1-204ENST00000375290 K7EQZ3 153 aa6.87□□□□□ -1.31
PTCH1-204ENST00000375290 IGLV1-50A0A075B6I6 118 aa6.87□□□□□ -1.31
PTCH1-204ENST00000375290 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
PTCH1-204ENST00000375290 ACANP16112 2415 aa6.86□□□□□ -1.31
PTCH1-204ENST00000375290 NCOR2Q9Y618 2525 aa6.86□□□□□ -1.31
PTCH1-204ENST00000375290 A0A1W2PPR1 153 aa6.86□□□□□ -1.31
PTCH1-204ENST00000375290 FSHBP01225 129 aa6.85□□□□□ -1.31
PTCH1-204ENST00000375290 CDSNQ15517 529 aa6.84□□□□□ -1.31
PTCH1-204ENST00000375290 Q8NAQ8 132 aa6.84□□□□□ -1.32
PTCH1-204ENST00000375290 EPM2AB3EWF7 344 aa6.83□□□□□ -1.32
PTCH1-204ENST00000375290 A8MUN3 132 aa6.83□□□□□ -1.32
PTCH1-204ENST00000375290 CSNK1G2-AS1Q8NCQ2 148 aa6.83□□□□□ -1.32
PTCH1-204ENST00000375290 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
PTCH1-204ENST00000375290 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
PTCH1-204ENST00000375290 PLA2G2AP14555 144 aa6.82□□□□□ -1.32
PTCH1-204ENST00000375290 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
PTCH1-204ENST00000375290 C1orf134Q5TEV5 83 aa6.82□□□□□ -1.32
PTCH1-204ENST00000375290 IGLV5-37A0A075B6J1 123 aa6.81□□□□□ -1.32
PTCH1-204ENST00000375290 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
PTCH1-204ENST00000375290 IGKV2D-30A0A075B6S6 120 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 Q75L30 129 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 MDFIQ99750 246 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
PTCH1-204ENST00000375290 CHD8Q9HCK8 2581 aa6.79□□□□□ -1.32
PTCH1-204ENST00000375290 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
PTCH1-204ENST00000375290 IGFL1Q6UW32 110 aa6.78□□□□□ -1.32
PTCH1-204ENST00000375290 ST20-AS1Q8NBB2 130 aa6.77□□□□□ -1.33
PTCH1-204ENST00000375290 EP400Q96L91 3159 aa6.77□□□□□ -1.33
PTCH1-204ENST00000375290 Q8N377 158 aa6.77□□□□□ -1.33
PTCH1-204ENST00000375290 OXLD1Q5BKU9 147 aa6.77□□□□□ -1.33
PTCH1-204ENST00000375290 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
PTCH1-204ENST00000375290 SPINK1P00995 79 aa6.76□□□□□ -1.33
PTCH1-204ENST00000375290 JMJD1CQ15652 2540 aa6.76□□□□□ -1.33
PTCH1-204ENST00000375290 Q9UF83 564 aa6.76□□□□□ -1.33
PTCH1-204ENST00000375290 MTORP42345 2549 aa6.76□□□□□ -1.33
PTCH1-204ENST00000375290 FAM104AQ969W3 186 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms