RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 C11orf71Q6IPW1 123 aa6□□□□□ -1.45
HSPG2-203ENST00000374695 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
HSPG2-203ENST00000374695 PRM2P04554 102 aa6□□□□□ -1.45
HSPG2-203ENST00000374695 A0A087WSZ3 146 aa6□□□□□ -1.45
HSPG2-203ENST00000374695 LINC00846Q9NV44 126 aa6□□□□□ -1.45
HSPG2-203ENST00000374695 C1orf229Q6ZS94 237 aaPredicted RBP5.99□□□□□ -1.45
HSPG2-203ENST00000374695 BRI3O95415 125 aa5.99□□□□□ -1.45
HSPG2-203ENST00000374695 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
HSPG2-203ENST00000374695 ADAMTSL4-AS1Q5T5F5 129 aa5.99□□□□□ -1.45
HSPG2-203ENST00000374695 MGAM2Q2M2H8 2515 aa5.99□□□□□ -1.45
HSPG2-203ENST00000374695 C11orf21Q9P2W6 132 aa5.99□□□□□ -1.45
HSPG2-203ENST00000374695 COX6A2Q02221 97 aa5.98□□□□□ -1.45
HSPG2-203ENST00000374695 CRIP3Q6Q6R5 217 aa5.98□□□□□ -1.45
HSPG2-203ENST00000374695 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
HSPG2-203ENST00000374695 TSPEAR-AS2P59090 65 aa5.98□□□□□ -1.45
HSPG2-203ENST00000374695 PRLHP81277 87 aa5.98□□□□□ -1.45
HSPG2-203ENST00000374695 C6orf223Q8N319 242 aa5.98□□□□□ -1.45
HSPG2-203ENST00000374695 CRIP2P52943 208 aaPredicted RBP5.98□□□□□ -1.45
HSPG2-203ENST00000374695 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
HSPG2-203ENST00000374695 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
HSPG2-203ENST00000374695 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
HSPG2-203ENST00000374695 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.45
HSPG2-203ENST00000374695 URB1-AS1Q96HZ7 61 aa5.96□□□□□ -1.45
HSPG2-203ENST00000374695 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.46
HSPG2-203ENST00000374695 ZNF580Q9UK33 172 aa5.96□□□□□ -1.46
HSPG2-203ENST00000374695 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
HSPG2-203ENST00000374695 WDFY4Q6ZS81 3184 aa5.96□□□□□ -1.46
HSPG2-203ENST00000374695 ELOF1P60002 83 aaKnown RBP5.95□□□□□ -1.46
HSPG2-203ENST00000374695 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
HSPG2-203ENST00000374695 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
HSPG2-203ENST00000374695 SMIM29Q86T20 159 aa5.95□□□□□ -1.46
HSPG2-203ENST00000374695 LINC01006Q8NI28 216 aa5.95□□□□□ -1.46
HSPG2-203ENST00000374695 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
HSPG2-203ENST00000374695 LAMA3Q16787 3333 aa5.95□□□□□ -1.46
HSPG2-203ENST00000374695 FLNAP21333 2647 aaKnown RBP5.94□□□□□ -1.46
HSPG2-203ENST00000374695 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
HSPG2-203ENST00000374695 FHL2Q14192 279 aa5.94□□□□□ -1.46
HSPG2-203ENST00000374695 LY6G6DO95868 133 aa5.94□□□□□ -1.46
HSPG2-203ENST00000374695 XIRP2A4UGR9 3374 aa5.94□□□□□ -1.46
HSPG2-203ENST00000374695 C10orf99Q6UWK7 81 aa5.94□□□□□ -1.46
HSPG2-203ENST00000374695 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 PRR15Q8IV56 129 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 CELSR3Q9NYQ7 3312 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 PLA2G2AP14555 144 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 IGLV1-51P01701 117 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 IGLV4-60A0A075B6I1 120 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 A0A1W2PNU3 283 aaPredicted RBP5.93□□□□□ -1.46
HSPG2-203ENST00000374695 C11orf72Q8NBR9 251 aa5.93□□□□□ -1.46
HSPG2-203ENST00000374695 SMCPP49901 116 aaPredicted RBP5.93□□□□□ -1.46
HSPG2-203ENST00000374695 UNC80Q8N2C7 3258 aa5.92□□□□□ -1.46
HSPG2-203ENST00000374695 C19orf84I3L1E1 186 aa5.92□□□□□ -1.46
HSPG2-203ENST00000374695 STAB1Q9NY15 2570 aa5.92□□□□□ -1.46
HSPG2-203ENST00000374695 HTTP42858 3142 aa5.92□□□□□ -1.46
HSPG2-203ENST00000374695 CHD6Q8TD26 2715 aa5.92□□□□□ -1.46
HSPG2-203ENST00000374695 FLNBO75369 2602 aaKnown RBP5.92□□□□□ -1.46
HSPG2-203ENST00000374695 ODF3L2Q3SX64 289 aa5.92□□□□□ -1.46
HSPG2-203ENST00000374695 A0A096LNJ9 63 aa5.91□□□□□ -1.46
HSPG2-203ENST00000374695 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
HSPG2-203ENST00000374695 OXLD1Q5BKU9 147 aa5.91□□□□□ -1.46
HSPG2-203ENST00000374695 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
HSPG2-203ENST00000374695 IGLV5-39A0A0G2JS06 123 aa5.9□□□□□ -1.46
HSPG2-203ENST00000374695 C1orf134Q5TEV5 83 aa5.9□□□□□ -1.46
HSPG2-203ENST00000374695 LAMA1P25391 3075 aa5.9□□□□□ -1.46
HSPG2-203ENST00000374695 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
HSPG2-203ENST00000374695 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.47
HSPG2-203ENST00000374695 MOBPQ13875 183 aa5.9□□□□□ -1.47
HSPG2-203ENST00000374695 CFAP47Q6ZTR5 3102 aa5.9□□□□□ -1.47
HSPG2-203ENST00000374695 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
HSPG2-203ENST00000374695 FRYQ5TBA9 3013 aa5.89□□□□□ -1.47
HSPG2-203ENST00000374695 PLA2G5P39877 138 aa5.89□□□□□ -1.47
HSPG2-203ENST00000374695 C18orf65Q6ZTR6 163 aa5.89□□□□□ -1.47
HSPG2-203ENST00000374695 DSPP15924 2871 aaKnown RBP5.89□□□□□ -1.47
HSPG2-203ENST00000374695 BRCA2P51587 3418 aa5.89□□□□□ -1.47
HSPG2-203ENST00000374695 Q9UF83 564 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 LYPD5Q6UWN5 251 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 C16orf95Q9H693 158 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 ITPR3Q14573 2671 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 LOC101927531A0A1B0GV80 90 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 KIAA0087Q14695 138 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 TRANK1O15050 2925 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 FAM19A4Q96LR4 140 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 Q8NBF4 154 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 SMCR5Q8TEV8 140 aa5.88□□□□□ -1.47
HSPG2-203ENST00000374695 NOTCH1P46531 2555 aa5.87□□□□□ -1.47
HSPG2-203ENST00000374695 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
HSPG2-203ENST00000374695 Q6ZQT0 140 aa5.87□□□□□ -1.47
HSPG2-203ENST00000374695 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
HSPG2-203ENST00000374695 LINC00313P59037 77 aa5.86□□□□□ -1.47
HSPG2-203ENST00000374695 FRYLO94915 3013 aa5.86□□□□□ -1.47
HSPG2-203ENST00000374695 LCA10Q71F78 164 aa5.86□□□□□ -1.47
HSPG2-203ENST00000374695 UQCR11O14957 56 aa5.86□□□□□ -1.47
HSPG2-203ENST00000374695 LINC00336Q6ZUF6 198 aa5.85□□□□□ -1.47
HSPG2-203ENST00000374695 A8MTW9 85 aa5.85□□□□□ -1.47
HSPG2-203ENST00000374695 IGLV5-45A0A087WSX0 123 aa5.85□□□□□ -1.47
HSPG2-203ENST00000374695 MGAQ8IWI9 3026 aa5.85□□□□□ -1.47
HSPG2-203ENST00000374695 Q6ZRU5 148 aa5.85□□□□□ -1.47
HSPG2-203ENST00000374695 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
HSPG2-203ENST00000374695 EDN2P20800 178 aa5.84□□□□□ -1.47
HSPG2-203ENST00000374695 Q6ZRX8 168 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms