RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 A0A096LNI7 61 aa11.84□□□□□ -0.51
CDX4-201ENST00000373514 HSPG2P98160 4391 aa11.83□□□□□ -0.52
CDX4-201ENST00000373514 PFN2P35080 140 aa11.83□□□□□ -0.52
CDX4-201ENST00000373514 LINC00158P58513 81 aa11.83□□□□□ -0.52
CDX4-201ENST00000373514 Q6ZVH6 145 aa11.83□□□□□ -0.52
CDX4-201ENST00000373514 SCXQ7RTU7 201 aa11.83□□□□□ -0.52
CDX4-201ENST00000373514 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
CDX4-201ENST00000373514 MUSTN1Q8IVN3 82 aa11.82□□□□□ -0.52
CDX4-201ENST00000373514 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
CDX4-201ENST00000373514 NPC2P61916 151 aa11.81□□□□□ -0.52
CDX4-201ENST00000373514 C9orf116Q5BN46 136 aaPredicted RBP11.81□□□□□ -0.52
CDX4-201ENST00000373514 HERC2O95714 4834 aa11.81□□□□□ -0.52
CDX4-201ENST00000373514 F8WDY8 70 aa11.8□□□□□ -0.52
CDX4-201ENST00000373514 IFITM1P13164 125 aa11.8□□□□□ -0.52
CDX4-201ENST00000373514 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
CDX4-201ENST00000373514 MIR7-3HGQ8N6C7 128 aa11.8□□□□□ -0.52
CDX4-201ENST00000373514 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
CDX4-201ENST00000373514 SPACA4Q8TDM5 124 aa11.8□□□□□ -0.52
CDX4-201ENST00000373514 LOC107984640A0A0U1RRK4 108 aa11.79□□□□□ -0.52
CDX4-201ENST00000373514 COX17Q14061 63 aa11.79□□□□□ -0.52
CDX4-201ENST00000373514 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
CDX4-201ENST00000373514 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
CDX4-201ENST00000373514 GAGE2BQ13066 116 aa11.78□□□□□ -0.52
CDX4-201ENST00000373514 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
CDX4-201ENST00000373514 A6NDN8 102 aa11.77□□□□□ -0.52
CDX4-201ENST00000373514 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.52
CDX4-201ENST00000373514 SMR3BP02814 79 aaPredicted RBP11.77□□□□□ -0.52
CDX4-201ENST00000373514 RPL24P83731 157 aaKnown RBP11.77□□□□□ -0.52
CDX4-201ENST00000373514 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.52
CDX4-201ENST00000373514 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
CDX4-201ENST00000373514 A6NJY4 79 aa11.76□□□□□ -0.53
CDX4-201ENST00000373514 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
CDX4-201ENST00000373514 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
CDX4-201ENST00000373514 A4D1N5 150 aa11.76□□□□□ -0.53
CDX4-201ENST00000373514 COPS9Q8WXC6 57 aa11.76□□□□□ -0.53
CDX4-201ENST00000373514 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
CDX4-201ENST00000373514 Q6ZRP5 223 aa11.75□□□□□ -0.53
CDX4-201ENST00000373514 A0A087WYN8 130 aa11.74□□□□□ -0.53
CDX4-201ENST00000373514 K7ERJ3 54 aa11.73□□□□□ -0.53
CDX4-201ENST00000373514 TLX1NBP0CAT3 122 aa11.73□□□□□ -0.53
CDX4-201ENST00000373514 PPDPFQ9H3Y8 114 aa11.73□□□□□ -0.53
CDX4-201ENST00000373514 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
CDX4-201ENST00000373514 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
CDX4-201ENST00000373514 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
CDX4-201ENST00000373514 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
CDX4-201ENST00000373514 A0A1B0GWB2 263 aa11.71□□□□□ -0.53
CDX4-201ENST00000373514 NDUFC2-KCTD14E9PQ53 114 aa11.7□□□□□ -0.54
CDX4-201ENST00000373514 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
CDX4-201ENST00000373514 CFC1P0CG37 223 aa11.7□□□□□ -0.54
CDX4-201ENST00000373514 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
CDX4-201ENST00000373514 Q8N1X5 172 aa11.7□□□□□ -0.54
CDX4-201ENST00000373514 KRTAP4-5Q9BYR2 181 aa11.7□□□□□ -0.54
CDX4-201ENST00000373514 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
CDX4-201ENST00000373514 RAB37Q96AX2 223 aa11.69□□□□□ -0.54
CDX4-201ENST00000373514 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
CDX4-201ENST00000373514 LOC107984156A0A0G2JMH3 177 aa11.68□□□□□ -0.54
CDX4-201ENST00000373514 TAX1BP3O14907 124 aa11.68□□□□□ -0.54
CDX4-201ENST00000373514 ARL17AQ8IVW1 177 aa11.68□□□□□ -0.54
CDX4-201ENST00000373514 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
CDX4-201ENST00000373514 A0A1W2PNN7 141 aa11.67□□□□□ -0.54
CDX4-201ENST00000373514 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
CDX4-201ENST00000373514 C9orf129Q5T035 196 aaKnown RBP11.67□□□□□ -0.54
CDX4-201ENST00000373514 Q5VSD8 79 aa11.67□□□□□ -0.54
CDX4-201ENST00000373514 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
CDX4-201ENST00000373514 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
CDX4-201ENST00000373514 FAT1Q14517 4588 aa11.64□□□□□ -0.55
CDX4-201ENST00000373514 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
CDX4-201ENST00000373514 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
CDX4-201ENST00000373514 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
CDX4-201ENST00000373514 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
CDX4-201ENST00000373514 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
CDX4-201ENST00000373514 C9orf118A6NHY6 69 aa11.6□□□□□ -0.55
CDX4-201ENST00000373514 EPM2AB3EWF7 344 aa11.6□□□□□ -0.55
CDX4-201ENST00000373514 NDUFC2O95298 119 aa11.6□□□□□ -0.55
CDX4-201ENST00000373514 Q8NDZ9 215 aa11.6□□□□□ -0.55
CDX4-201ENST00000373514 NAA38Q9BRA0 125 aaKnown RBP11.6□□□□□ -0.55
CDX4-201ENST00000373514 SERTAD4-AS1Q5TG53 156 aa11.6□□□□□ -0.55
CDX4-201ENST00000373514 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
CDX4-201ENST00000373514 TSPAN13O95857 204 aa11.59□□□□□ -0.55
CDX4-201ENST00000373514 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
CDX4-201ENST00000373514 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
CDX4-201ENST00000373514 ABCA13Q86UQ4 5058 aa11.58□□□□□ -0.56
CDX4-201ENST00000373514 H3BUT2 72 aa11.58□□□□□ -0.56
CDX4-201ENST00000373514 H7C2G1 150 aa11.58□□□□□ -0.56
CDX4-201ENST00000373514 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
CDX4-201ENST00000373514 LINC00337Q8N6G1 96 aa11.58□□□□□ -0.56
CDX4-201ENST00000373514 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
CDX4-201ENST00000373514 A0A1B0GV90 55 aa11.57□□□□□ -0.56
CDX4-201ENST00000373514 KRTAP10-4P60372 401 aaPredicted RBP11.57□□□□□ -0.56
CDX4-201ENST00000373514 RPL37AP61513 92 aaKnown RBP11.56□□□□□ -0.56
CDX4-201ENST00000373514 M0QXV9 152 aa11.55□□□□□ -0.56
CDX4-201ENST00000373514 NCR3O14931 201 aa11.55□□□□□ -0.56
CDX4-201ENST00000373514 Q1RN00 199 aa11.55□□□□□ -0.56
CDX4-201ENST00000373514 VPS13BQ7Z7G8 4022 aa11.54□□□□□ -0.56
CDX4-201ENST00000373514 VPREB1P12018 145 aa11.54□□□□□ -0.56
CDX4-201ENST00000373514 C7orf33Q8WU49 177 aa11.54□□□□□ -0.56
CDX4-201ENST00000373514 PLA2G1BP04054 148 aaKnown RBP11.53□□□□□ -0.56
CDX4-201ENST00000373514 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
CDX4-201ENST00000373514 A0A1W2PPM0 123 aa11.52□□□□□ -0.57
CDX4-201ENST00000373514 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms