RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CDK2AP2O75956 126 aa10.23□□□□□ -0.77
LMO4-201ENST00000370542 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
LMO4-201ENST00000370542 CCL18P55774 89 aa10.23□□□□□ -0.77
LMO4-201ENST00000370542 H0YGX0 51 aa10.22□□□□□ -0.77
LMO4-201ENST00000370542 HTN1P15515 57 aa10.22□□□□□ -0.77
LMO4-201ENST00000370542 HIST1H4AP62805 103 aaKnown RBP10.22□□□□□ -0.77
LMO4-201ENST00000370542 DAZ2Q13117 558 aaKnown RBP10.22□□□□□ -0.77
LMO4-201ENST00000370542 C5orf47Q569G3 176 aa10.22□□□□□ -0.77
LMO4-201ENST00000370542 DAZ4Q86SG3 579 aaKnown RBP10.22□□□□□ -0.77
LMO4-201ENST00000370542 Q8N1X5 172 aa10.22□□□□□ -0.77
LMO4-201ENST00000370542 OR13C6PQ8NH95 151 aa10.22□□□□□ -0.77
LMO4-201ENST00000370542 DAZ3Q9NR90 486 aaKnown RBP10.22□□□□□ -0.77
LMO4-201ENST00000370542 H3BNG1 76 aa10.21□□□□□ -0.77
LMO4-201ENST00000370542 RPL28P46779 137 aaKnown RBP10.21□□□□□ -0.77
LMO4-201ENST00000370542 TNP2Q05952 138 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 Q6JHZ5 121 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 C6orf223Q8N319 242 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 DEFB104AQ8WTQ1 72 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 UPK3BQ9BT76 320 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 Q9H8V8 135 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 CDKN2A-AS1Q9UH64 79 aa10.2□□□□□ -0.78
LMO4-201ENST00000370542 RS1O15537 224 aa10.19□□□□□ -0.78
LMO4-201ENST00000370542 MALP21145 153 aa10.19□□□□□ -0.78
LMO4-201ENST00000370542 TMEM258P61165 79 aa10.19□□□□□ -0.78
LMO4-201ENST00000370542 S100A7L2Q5SY68 101 aa10.19□□□□□ -0.78
LMO4-201ENST00000370542 C11orf72Q8NBR9 251 aa10.19□□□□□ -0.78
LMO4-201ENST00000370542 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
LMO4-201ENST00000370542 DNAL4O96015 105 aa10.17□□□□□ -0.78
LMO4-201ENST00000370542 CRPP02741 224 aa10.17□□□□□ -0.78
LMO4-201ENST00000370542 NPC2P61916 151 aa10.17□□□□□ -0.78
LMO4-201ENST00000370542 RPL18AQ02543 176 aaKnown RBP10.17□□□□□ -0.78
LMO4-201ENST00000370542 LINC00694P0DN24 101 aa10.16□□□□□ -0.78
LMO4-201ENST00000370542 ESRGQ1W209 222 aa10.16□□□□□ -0.78
LMO4-201ENST00000370542 Q6ZTI0 123 aa10.16□□□□□ -0.78
LMO4-201ENST00000370542 SMCR5Q8TEV8 140 aa10.16□□□□□ -0.78
LMO4-201ENST00000370542 ZNF625Q96I27 306 aaPredicted RBP10.16□□□□□ -0.78
LMO4-201ENST00000370542 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
LMO4-201ENST00000370542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.15□□□□□ -0.78
LMO4-201ENST00000370542 IGKV2-29A2NJV5 120 aaPredicted RBP10.15□□□□□ -0.78
LMO4-201ENST00000370542 SMIM1B2RUZ4 78 aa10.14□□□□□ -0.79
LMO4-201ENST00000370542 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
LMO4-201ENST00000370542 ATP5EP2Q5VTU8 51 aa10.14□□□□□ -0.79
LMO4-201ENST00000370542 C2orf48Q96LS8 159 aa10.14□□□□□ -0.79
LMO4-201ENST00000370542 NDUFC2-KCTD14E9PQ53 114 aa10.13□□□□□ -0.79
LMO4-201ENST00000370542 SERP2Q8N6R1 65 aa10.13□□□□□ -0.79
LMO4-201ENST00000370542 OBSCN-AS1Q96MR7 158 aa10.13□□□□□ -0.79
LMO4-201ENST00000370542 A0A096LPF7 62 aa10.12□□□□□ -0.79
LMO4-201ENST00000370542 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
LMO4-201ENST00000370542 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
LMO4-201ENST00000370542 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
LMO4-201ENST00000370542 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
LMO4-201ENST00000370542 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
LMO4-201ENST00000370542 BCE1O60756 84 aa10.1□□□□□ -0.79
LMO4-201ENST00000370542 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
LMO4-201ENST00000370542 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
LMO4-201ENST00000370542 TRGV1A0A0A0MS02 117 aa10.08□□□□□ -0.8
LMO4-201ENST00000370542 COX6A2Q02221 97 aa10.08□□□□□ -0.8
LMO4-201ENST00000370542 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
LMO4-201ENST00000370542 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
LMO4-201ENST00000370542 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
LMO4-201ENST00000370542 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
LMO4-201ENST00000370542 FAT1Q14517 4588 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 IBA57-AS1B1ANH7 110 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 NDUFC2O95298 119 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
LMO4-201ENST00000370542 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 CDC42SE2Q9NRR3 84 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
LMO4-201ENST00000370542 hADV29S1A0JD25 119 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 K7EQD1 137 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 FHL2Q14192 279 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 Q6ZSN1 163 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
LMO4-201ENST00000370542 UBE2L6O14933 153 aa10.04□□□□□ -0.8
LMO4-201ENST00000370542 PAX4O43316 350 aa10.04□□□□□ -0.8
LMO4-201ENST00000370542 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
LMO4-201ENST00000370542 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
LMO4-201ENST00000370542 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
LMO4-201ENST00000370542 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
LMO4-201ENST00000370542 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
LMO4-201ENST00000370542 CCKP06307 115 aa10.02□□□□□ -0.81
LMO4-201ENST00000370542 TRAV13-1A0A0B4J241 112 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 H3BQ85 93 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 MIR7-3HGQ8N6C7 128 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 DPH3Q96FX2 82 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 LINC00167Q96N53 147 aa10.01□□□□□ -0.81
LMO4-201ENST00000370542 USP17L23D6RBM5 183 aa10□□□□□ -0.81
LMO4-201ENST00000370542 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
LMO4-201ENST00000370542 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
LMO4-201ENST00000370542 Q9HAA7 133 aa9.99□□□□□ -0.81
LMO4-201ENST00000370542 LINC00158P58513 81 aa9.98□□□□□ -0.81
LMO4-201ENST00000370542 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
LMO4-201ENST00000370542 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms