RNA–Protein interactions for RNA: ENST00000370002.7

PITX3-201, Transcript of paired like homeodomain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PITX3, Length 1,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITX3-201ENST00000370002 C10orf25Q5T742 122 aa12.57□□□□□ -0.4
PITX3-201ENST00000370002 DLEU1O43261 78 aa12.56□□□□□ -0.4
PITX3-201ENST00000370002 PLA2G2DQ9UNK4 145 aa12.56□□□□□ -0.4
PITX3-201ENST00000370002 SPINK8P0C7L1 97 aa12.56□□□□□ -0.4
PITX3-201ENST00000370002 HMCN2Q8NDA2 5059 aa12.55□□□□□ -0.4
PITX3-201ENST00000370002 PCP4L1A6NKN8 68 aa12.55□□□□□ -0.4
PITX3-201ENST00000370002 LGALS3P17931 250 aaKnown RBP12.55□□□□□ -0.4
PITX3-201ENST00000370002 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
PITX3-201ENST00000370002 NDUFC2-KCTD14E9PQ53 114 aa12.54□□□□□ -0.4
PITX3-201ENST00000370002 J3QQQ9 107 aa12.54□□□□□ -0.4
PITX3-201ENST00000370002 DDTP30046 118 aa12.54□□□□□ -0.4
PITX3-201ENST00000370002 Q8IZM0 81 aa12.54□□□□□ -0.4
PITX3-201ENST00000370002 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
PITX3-201ENST00000370002 SMIM1B2RUZ4 78 aa12.53□□□□□ -0.4
PITX3-201ENST00000370002 PRSS2P07478 247 aa12.53□□□□□ -0.4
PITX3-201ENST00000370002 PCP2Q8IVA1 136 aa12.53□□□□□ -0.4
PITX3-201ENST00000370002 PSORS1C2Q9UIG4 136 aa12.53□□□□□ -0.4
PITX3-201ENST00000370002 MYMXA0A1B0GTQ4 84 aa12.51□□□□□ -0.41
PITX3-201ENST00000370002 C6orf226Q5I0X4 101 aa12.51□□□□□ -0.41
PITX3-201ENST00000370002 ZNF815PA8K554 130 aa12.5□□□□□ -0.41
PITX3-201ENST00000370002 CKS1BP61024 79 aa12.5□□□□□ -0.41
PITX3-201ENST00000370002 PHF5AQ7RTV0 110 aaKnown RBP12.5□□□□□ -0.41
PITX3-201ENST00000370002 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
PITX3-201ENST00000370002 C2orf82Q6UX34 121 aa12.49□□□□□ -0.41
PITX3-201ENST00000370002 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
PITX3-201ENST00000370002 CXCL5P42830 114 aa12.48□□□□□ -0.41
PITX3-201ENST00000370002 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
PITX3-201ENST00000370002 KRTAP10-8P60410 259 aa12.48□□□□□ -0.41
PITX3-201ENST00000370002 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
PITX3-201ENST00000370002 C1orf137Q5JT78 98 aa12.46□□□□□ -0.41
PITX3-201ENST00000370002 COX7B2Q8TF08 81 aa12.46□□□□□ -0.41
PITX3-201ENST00000370002 NDUFA12Q9UI09 145 aa12.46□□□□□ -0.41
PITX3-201ENST00000370002 SFTA2Q6UW10 78 aa12.45□□□□□ -0.42
PITX3-201ENST00000370002 TOMM7Q9P0U1 55 aa12.45□□□□□ -0.42
PITX3-201ENST00000370002 HIGD1BQ9P298 99 aa12.45□□□□□ -0.42
PITX3-201ENST00000370002 FAM168BA1KXE4 195 aa12.44□□□□□ -0.42
PITX3-201ENST00000370002 SCGB1D4Q6XE38 83 aa12.44□□□□□ -0.42
PITX3-201ENST00000370002 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
PITX3-201ENST00000370002 TP73-AS1Q9UF72 201 aa12.43□□□□□ -0.42
PITX3-201ENST00000370002 IGLV7-43P04211 117 aa12.43□□□□□ -0.42
PITX3-201ENST00000370002 C9orf129Q5T035 196 aaKnown RBP12.43□□□□□ -0.42
PITX3-201ENST00000370002 C2orf91Q6ZV80 131 aa12.43□□□□□ -0.42
PITX3-201ENST00000370002 DIRC1Q969H9 104 aa12.43□□□□□ -0.42
PITX3-201ENST00000370002 M0QXV9 152 aa12.42□□□□□ -0.42
PITX3-201ENST00000370002 HERV-K104P63124 156 aa12.42□□□□□ -0.42
PITX3-201ENST00000370002 KRTAP7-1Q8IUC3 87 aa12.42□□□□□ -0.42
PITX3-201ENST00000370002 TNXBP22105 4242 aa12.41□□□□□ -0.42
PITX3-201ENST00000370002 CTAG1AP78358 180 aa12.4□□□□□ -0.42
PITX3-201ENST00000370002 ZNF625Q96I27 306 aaPredicted RBP12.39□□□□□ -0.43
PITX3-201ENST00000370002 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
PITX3-201ENST00000370002 UBE2BP63146 152 aa12.38□□□□□ -0.43
PITX3-201ENST00000370002 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
PITX3-201ENST00000370002 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
PITX3-201ENST00000370002 HSD52Q0P140 79 aa12.37□□□□□ -0.43
PITX3-201ENST00000370002 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
PITX3-201ENST00000370002 TIMM17BO60830 172 aa12.36□□□□□ -0.43
PITX3-201ENST00000370002 TAL2Q16559 108 aa12.36□□□□□ -0.43
PITX3-201ENST00000370002 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
PITX3-201ENST00000370002 H0Y9J4 135 aa12.35□□□□□ -0.43
PITX3-201ENST00000370002 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
PITX3-201ENST00000370002 M0R143 59 aa12.34□□□□□ -0.43
PITX3-201ENST00000370002 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
PITX3-201ENST00000370002 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
PITX3-201ENST00000370002 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
PITX3-201ENST00000370002 Q6ZVH6 145 aa12.32□□□□□ -0.44
PITX3-201ENST00000370002 XAGE1AQ9HD64 81 aa12.32□□□□□ -0.44
PITX3-201ENST00000370002 IGLV1-50A0A075B6I6 118 aa12.3□□□□□ -0.44
PITX3-201ENST00000370002 SPANXDQ9BXN6 97 aa12.3□□□□□ -0.44
PITX3-201ENST00000370002 SPANXCQ9NY87 97 aa12.3□□□□□ -0.44
PITX3-201ENST00000370002 HINT1P49773 126 aaPredicted RBP12.29□□□□□ -0.44
PITX3-201ENST00000370002 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
PITX3-201ENST00000370002 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
PITX3-201ENST00000370002 ZNF861PO60384 105 aa12.28□□□□□ -0.44
PITX3-201ENST00000370002 CEND1Q8N111 149 aa12.28□□□□□ -0.44
PITX3-201ENST00000370002 LITAFQ99732 161 aa12.28□□□□□ -0.44
PITX3-201ENST00000370002 COX17Q14061 63 aa12.27□□□□□ -0.45
PITX3-201ENST00000370002 BVES-AS1Q5T3Y7 98 aa12.27□□□□□ -0.45
PITX3-201ENST00000370002 ERG28Q9UKR5 140 aa12.27□□□□□ -0.45
PITX3-201ENST00000370002 SMIM13P0DJ93 91 aa12.26□□□□□ -0.45
PITX3-201ENST00000370002 IFITM1P13164 125 aa12.26□□□□□ -0.45
PITX3-201ENST00000370002 BATFQ16520 125 aa12.26□□□□□ -0.45
PITX3-201ENST00000370002 UBR4Q5T4S7 5183 aa12.25□□□□□ -0.45
PITX3-201ENST00000370002 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
PITX3-201ENST00000370002 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
PITX3-201ENST00000370002 A6NJY4 79 aa12.25□□□□□ -0.45
PITX3-201ENST00000370002 LINC00158P58513 81 aa12.25□□□□□ -0.45
PITX3-201ENST00000370002 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
PITX3-201ENST00000370002 KRTAP1-4P0C5Y4 121 aa12.24□□□□□ -0.45
PITX3-201ENST00000370002 ADAMTSL4-AS1Q5T5F5 129 aa12.24□□□□□ -0.45
PITX3-201ENST00000370002 RPL13AP40429 203 aaKnown RBP12.23□□□□□ -0.45
PITX3-201ENST00000370002 RPL24P83731 157 aaKnown RBP12.23□□□□□ -0.45
PITX3-201ENST00000370002 PRR26Q8N8Z3 221 aa12.23□□□□□ -0.45
PITX3-201ENST00000370002 A6NDN8 102 aa12.22□□□□□ -0.45
PITX3-201ENST00000370002 PFN2P35080 140 aa12.22□□□□□ -0.45
PITX3-201ENST00000370002 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
PITX3-201ENST00000370002 A0A0U1RRA0 63 aa12.21□□□□□ -0.45
PITX3-201ENST00000370002 BCE1O60756 84 aa12.2□□□□□ -0.46
PITX3-201ENST00000370002 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
PITX3-201ENST00000370002 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
PITX3-201ENST00000370002 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms