RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LECT2O14960 151 aa13.74□□□□□ -0.21
MAP1LC3A-201ENST00000360668 RNF151Q2KHN1 245 aa13.74□□□□□ -0.21
MAP1LC3A-201ENST00000360668 SACSQ9NZJ4 4579 aa13.73□□□□□ -0.21
MAP1LC3A-201ENST00000360668 TCL1BO95988 128 aa13.73□□□□□ -0.21
MAP1LC3A-201ENST00000360668 Q6ZR54 194 aa13.73□□□□□ -0.21
MAP1LC3A-201ENST00000360668 Q6ZRN7 208 aaPredicted RBP13.73□□□□□ -0.21
MAP1LC3A-201ENST00000360668 CARD19Q96LW7 228 aa13.73□□□□□ -0.21
MAP1LC3A-201ENST00000360668 M0R2N4 97 aa13.72□□□□□ -0.21
MAP1LC3A-201ENST00000360668 TRIAP1O43715 76 aa13.72□□□□□ -0.21
MAP1LC3A-201ENST00000360668 NDUFC2O95298 119 aa13.72□□□□□ -0.21
MAP1LC3A-201ENST00000360668 SLPIP03973 132 aa13.71□□□□□ -0.21
MAP1LC3A-201ENST00000360668 WFDC2Q14508 124 aa13.71□□□□□ -0.21
MAP1LC3A-201ENST00000360668 C14orf177Q52M58 125 aa13.71□□□□□ -0.21
MAP1LC3A-201ENST00000360668 LINC00476Q8WZB0 136 aa13.71□□□□□ -0.21
MAP1LC3A-201ENST00000360668 PRO0461Q9UI25 63 aa13.71□□□□□ -0.21
MAP1LC3A-201ENST00000360668 DNAH6Q9C0G6 4158 aa13.71□□□□□ -0.22
MAP1LC3A-201ENST00000360668 IGKV2-28A0A075B6P5 120 aa13.71□□□□□ -0.22
MAP1LC3A-201ENST00000360668 LY6G6CO95867 125 aa13.71□□□□□ -0.22
MAP1LC3A-201ENST00000360668 IGKV2D-28P01615 120 aa13.71□□□□□ -0.22
MAP1LC3A-201ENST00000360668 ALMS1Q8TCU4 4167 aa13.7□□□□□ -0.22
MAP1LC3A-201ENST00000360668 RYR2Q92736 4967 aa13.7□□□□□ -0.22
MAP1LC3A-201ENST00000360668 NDUFC2-KCTD14E9PQ53 114 aa13.7□□□□□ -0.22
MAP1LC3A-201ENST00000360668 ATXN8Q156A1 80 aa13.7□□□□□ -0.22
MAP1LC3A-201ENST00000360668 TLX1NBP0CAT3 122 aa13.67□□□□□ -0.22
MAP1LC3A-201ENST00000360668 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3A-201ENST00000360668 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
MAP1LC3A-201ENST00000360668 LRCOL1A6NCL2 159 aa13.66□□□□□ -0.22
MAP1LC3A-201ENST00000360668 KMT2AQ03164 3969 aa13.66□□□□□ -0.22
MAP1LC3A-201ENST00000360668 M0QXV9 152 aa13.65□□□□□ -0.22
MAP1LC3A-201ENST00000360668 CNBPP62633 177 aaKnown RBP13.65□□□□□ -0.22
MAP1LC3A-201ENST00000360668 Q6ZRP5 223 aa13.64□□□□□ -0.23
MAP1LC3A-201ENST00000360668 LINC01600Q96MT4 127 aa13.64□□□□□ -0.23
MAP1LC3A-201ENST00000360668 XAGE1AQ9HD64 81 aa13.62□□□□□ -0.23
MAP1LC3A-201ENST00000360668 LST1O00453 97 aa13.62□□□□□ -0.23
MAP1LC3A-201ENST00000360668 OCIAD2Q56VL3 154 aa13.62□□□□□ -0.23
MAP1LC3A-201ENST00000360668 LINC01620Q4KN68 170 aa13.61□□□□□ -0.23
MAP1LC3A-201ENST00000360668 GAGE2EQ4V326 116 aa13.6□□□□□ -0.23
MAP1LC3A-201ENST00000360668 Q8NDZ9 215 aa13.6□□□□□ -0.23
MAP1LC3A-201ENST00000360668 GAGE2DQ9UEU5 116 aa13.6□□□□□ -0.23
MAP1LC3A-201ENST00000360668 SMCPP49901 116 aaPredicted RBP13.59□□□□□ -0.23
MAP1LC3A-201ENST00000360668 C1orf134Q5TEV5 83 aa13.59□□□□□ -0.23
MAP1LC3A-201ENST00000360668 H0YGX0 51 aa13.58□□□□□ -0.23
MAP1LC3A-201ENST00000360668 K7ERU9 68 aa13.58□□□□□ -0.23
MAP1LC3A-201ENST00000360668 RPL18AQ02543 176 aaKnown RBP13.58□□□□□ -0.23
MAP1LC3A-201ENST00000360668 TMEM126AQ9H061 195 aa13.58□□□□□ -0.23
MAP1LC3A-201ENST00000360668 DNAH2Q9P225 4427 aa13.58□□□□□ -0.24
MAP1LC3A-201ENST00000360668 HYDINQ4G0P3 5121 aa13.58□□□□□ -0.24
MAP1LC3A-201ENST00000360668 LOC107984640A0A0U1RRK4 108 aa13.58□□□□□ -0.24
MAP1LC3A-201ENST00000360668 PRR3P79522 188 aaKnown RBP13.58□□□□□ -0.24
MAP1LC3A-201ENST00000360668 OR13C6PQ8NH95 151 aa13.58□□□□□ -0.24
MAP1LC3A-201ENST00000360668 SMIM11BQ8TCY0 68 aa13.58□□□□□ -0.24
MAP1LC3A-201ENST00000360668 TRBV10-2A0A0K0K1G8 114 aa13.57□□□□□ -0.24
MAP1LC3A-201ENST00000360668 C9JAW5 83 aa13.56□□□□□ -0.24
MAP1LC3A-201ENST00000360668 SLC25A20O43772 301 aa13.56□□□□□ -0.24
MAP1LC3A-201ENST00000360668 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.55□□□□□ -0.24
MAP1LC3A-201ENST00000360668 C9orf129Q5T035 196 aaKnown RBP13.55□□□□□ -0.24
MAP1LC3A-201ENST00000360668 Q8N814 137 aa13.55□□□□□ -0.24
MAP1LC3A-201ENST00000360668 CLEC2BQ92478 149 aa13.55□□□□□ -0.24
MAP1LC3A-201ENST00000360668 A0A087WTM6 91 aa13.54□□□□□ -0.24
MAP1LC3A-201ENST00000360668 NCR3O14931 201 aa13.54□□□□□ -0.24
MAP1LC3A-201ENST00000360668 TRACP01848 142 aa13.54□□□□□ -0.24
MAP1LC3A-201ENST00000360668 VPREB1P12018 145 aa13.54□□□□□ -0.24
MAP1LC3A-201ENST00000360668 ETDBQ3ZM63 59 aa13.54□□□□□ -0.24
MAP1LC3A-201ENST00000360668 MTURNQ8N3F0 131 aa13.53□□□□□ -0.24
MAP1LC3A-201ENST00000360668 H3BT86 120 aa13.52□□□□□ -0.25
MAP1LC3A-201ENST00000360668 ANKRD29Q8N6D5 301 aa13.52□□□□□ -0.25
MAP1LC3A-201ENST00000360668 PLA2G2DQ9UNK4 145 aa13.52□□□□□ -0.25
MAP1LC3A-201ENST00000360668 GAGE2BQ13066 116 aa13.51□□□□□ -0.25
MAP1LC3A-201ENST00000360668 TEN1Q86WV5 123 aa13.51□□□□□ -0.25
MAP1LC3A-201ENST00000360668 S100A7L2Q5SY68 101 aa13.5□□□□□ -0.25
MAP1LC3A-201ENST00000360668 PKIGQ9Y2B9 76 aa13.5□□□□□ -0.25
MAP1LC3A-201ENST00000360668 J3QR89 54 aa13.49□□□□□ -0.25
MAP1LC3A-201ENST00000360668 C9orf163Q8N9P6 203 aa13.49□□□□□ -0.25
MAP1LC3A-201ENST00000360668 M0R378 163 aa13.49□□□□□ -0.25
MAP1LC3A-201ENST00000360668 IGLV6-57P01721 117 aa13.49□□□□□ -0.25
MAP1LC3A-201ENST00000360668 DNAH17Q9UFH2 4485 aa13.48□□□□□ -0.25
MAP1LC3A-201ENST00000360668 C16orf90A8MZG2 172 aa13.48□□□□□ -0.25
MAP1LC3A-201ENST00000360668 IGLV5-37A0A075B6J1 123 aa13.45□□□□□ -0.26
MAP1LC3A-201ENST00000360668 A0A1B0GX51 115 aa13.45□□□□□ -0.26
MAP1LC3A-201ENST00000360668 SERTAD4-AS1Q5TG53 156 aa13.45□□□□□ -0.26
MAP1LC3A-201ENST00000360668 PPDPFLQ8WWR9 84 aa13.45□□□□□ -0.26
MAP1LC3A-201ENST00000360668 CBY1Q9Y3M2 126 aa13.45□□□□□ -0.26
MAP1LC3A-201ENST00000360668 A0A096LNI7 61 aa13.44□□□□□ -0.26
MAP1LC3A-201ENST00000360668 NKAPP1Q8N9T2 125 aa13.44□□□□□ -0.26
MAP1LC3A-201ENST00000360668 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
MAP1LC3A-201ENST00000360668 TRBV10-3A0A0K0K1G6 114 aa13.43□□□□□ -0.26
MAP1LC3A-201ENST00000360668 FRAS1Q86XX4 4008 aa13.41□□□□□ -0.26
MAP1LC3A-201ENST00000360668 FAM168BA1KXE4 195 aa13.41□□□□□ -0.26
MAP1LC3A-201ENST00000360668 SDIM1Q6ZPB5 146 aa13.41□□□□□ -0.26
MAP1LC3A-201ENST00000360668 RTL8CO15255 209 aa13.4□□□□□ -0.26
MAP1LC3A-201ENST00000360668 IGKV2-24A0A0C4DH68 120 aa13.39□□□□□ -0.27
MAP1LC3A-201ENST00000360668 SNCGO76070 127 aa13.39□□□□□ -0.27
MAP1LC3A-201ENST00000360668 TNP2Q05952 138 aa13.39□□□□□ -0.27
MAP1LC3A-201ENST00000360668 KRTAP7-1Q8IUC3 87 aa13.39□□□□□ -0.27
MAP1LC3A-201ENST00000360668 HECTD4Q9Y4D8 3996 aa13.39□□□□□ -0.27
MAP1LC3A-201ENST00000360668 TRAV23DV6A0A075B6W5 121 aa13.38□□□□□ -0.27
MAP1LC3A-201ENST00000360668 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
MAP1LC3A-201ENST00000360668 C7orf33Q8WU49 177 aa13.38□□□□□ -0.27
MAP1LC3A-201ENST00000360668 EPPK1P58107 5090 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3A-201ENST00000360668 DNAL4O96015 105 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms