RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
PDLIM7-203ENST00000359895 PRR3P79522 188 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-203ENST00000359895 IGKV2D-24A0A075B6R9 120 aa12.19□□□□□ -0.46
PDLIM7-203ENST00000359895 A0A087WYN8 130 aa12.19□□□□□ -0.46
PDLIM7-203ENST00000359895 A0A1B0GX51 115 aa12.19□□□□□ -0.46
PDLIM7-203ENST00000359895 SCGB1A1P11684 91 aa12.19□□□□□ -0.46
PDLIM7-203ENST00000359895 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
PDLIM7-203ENST00000359895 TENM3Q9P273 2699 aa12.19□□□□□ -0.46
PDLIM7-203ENST00000359895 NCR3O14931 201 aa12.18□□□□□ -0.46
PDLIM7-203ENST00000359895 HIGD2BQ4VC39 106 aa12.18□□□□□ -0.46
PDLIM7-203ENST00000359895 S100A7L2Q5SY68 101 aa12.18□□□□□ -0.46
PDLIM7-203ENST00000359895 LINC00588Q9Y4M8 146 aa12.18□□□□□ -0.46
PDLIM7-203ENST00000359895 LECT2O14960 151 aa12.17□□□□□ -0.46
PDLIM7-203ENST00000359895 Q9HAA7 133 aa12.17□□□□□ -0.46
PDLIM7-203ENST00000359895 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
PDLIM7-203ENST00000359895 FAM240AA0A1B0GVK7 77 aa12.16□□□□□ -0.46
PDLIM7-203ENST00000359895 Q8NDZ9 215 aa12.16□□□□□ -0.46
PDLIM7-203ENST00000359895 SNCGO76070 127 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 INAFM2P0DMQ5 153 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 Q6ZRU5 148 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 XGP55808 180 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 RMI2Q96E14 147 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 LINC00167Q96N53 147 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 UPK3BQ9BT76 320 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 C22orf24Q9Y442 160 aa12.13□□□□□ -0.47
PDLIM7-203ENST00000359895 NDUFC2-KCTD14E9PQ53 114 aa12.11□□□□□ -0.47
PDLIM7-203ENST00000359895 ACYP1P07311 99 aa12.11□□□□□ -0.47
PDLIM7-203ENST00000359895 C21orf62-AS1Q17RA5 79 aa12.11□□□□□ -0.47
PDLIM7-203ENST00000359895 ORMDL1Q9P0S3 153 aa12.11□□□□□ -0.47
PDLIM7-203ENST00000359895 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-203ENST00000359895 MT-ATP8P03928 68 aa12.09□□□□□ -0.47
PDLIM7-203ENST00000359895 SYCNQ0VAF6 134 aa12.09□□□□□ -0.47
PDLIM7-203ENST00000359895 C6orf99Q4VX62 202 aa12.09□□□□□ -0.47
PDLIM7-203ENST00000359895 Q8N814 137 aa12.09□□□□□ -0.47
PDLIM7-203ENST00000359895 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
PDLIM7-203ENST00000359895 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-203ENST00000359895 B9D2Q9BPU9 175 aa12.06□□□□□ -0.48
PDLIM7-203ENST00000359895 VPREB1P12018 145 aa12.05□□□□□ -0.48
PDLIM7-203ENST00000359895 M0R378 163 aa12.05□□□□□ -0.48
PDLIM7-203ENST00000359895 LINC00575Q6W349 94 aa12.05□□□□□ -0.48
PDLIM7-203ENST00000359895 OBSCN-AS1Q96MR7 158 aa12.05□□□□□ -0.48
PDLIM7-203ENST00000359895 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
PDLIM7-203ENST00000359895 TRBV10-3A0A0K0K1G6 114 aa12.04□□□□□ -0.48
PDLIM7-203ENST00000359895 SLPIP03973 132 aa12.04□□□□□ -0.48
PDLIM7-203ENST00000359895 TMEM256-PLSCR3K7ERE1 68 aa12.03□□□□□ -0.48
PDLIM7-203ENST00000359895 DIRC1Q969H9 104 aa12.02□□□□□ -0.49
PDLIM7-203ENST00000359895 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 TLX1NBP0CAT3 122 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 Q6ZRP5 223 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 HUWE1Q7Z6Z7 4374 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-203ENST00000359895 H3BQ85 93 aa12□□□□□ -0.49
PDLIM7-203ENST00000359895 JMJD7-PLA2G4BH0Y9G9 81 aa11.99□□□□□ -0.49
PDLIM7-203ENST00000359895 ZNF73O43830 326 aaPredicted RBP11.98□□□□□ -0.49
PDLIM7-203ENST00000359895 COX7BP24311 80 aa11.96□□□□□ -0.49
PDLIM7-203ENST00000359895 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
PDLIM7-203ENST00000359895 Q6Q795 121 aa11.96□□□□□ -0.49
PDLIM7-203ENST00000359895 C14orf132Q9NPU4 83 aa11.96□□□□□ -0.49
PDLIM7-203ENST00000359895 APLNQ9ULZ1 77 aa11.96□□□□□ -0.49
PDLIM7-203ENST00000359895 C9orf129Q5T035 196 aaKnown RBP11.96□□□□□ -0.5
PDLIM7-203ENST00000359895 PLA2G2DQ9UNK4 145 aa11.96□□□□□ -0.5
PDLIM7-203ENST00000359895 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-203ENST00000359895 GAGE2BQ13066 116 aa11.95□□□□□ -0.5
PDLIM7-203ENST00000359895 CASC10Q5T4H9 136 aa11.95□□□□□ -0.5
PDLIM7-203ENST00000359895 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
PDLIM7-203ENST00000359895 ELOF1P60002 83 aaKnown RBP11.94□□□□□ -0.5
PDLIM7-203ENST00000359895 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
PDLIM7-203ENST00000359895 GHRHP01286 108 aa11.93□□□□□ -0.5
PDLIM7-203ENST00000359895 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
PDLIM7-203ENST00000359895 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
PDLIM7-203ENST00000359895 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
PDLIM7-203ENST00000359895 DNAH9Q9NYC9 4486 aa11.92□□□□□ -0.5
PDLIM7-203ENST00000359895 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.91□□□□□ -0.5
PDLIM7-203ENST00000359895 IGLV5-37A0A075B6J1 123 aa11.89□□□□□ -0.51
PDLIM7-203ENST00000359895 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
PDLIM7-203ENST00000359895 NUPR2A6NF83 97 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 CCKP06307 115 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 Q6ZQY7 126 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 TGP01266 2768 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 TRBV7-7A0A0K0K1E9 115 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 SMCR5Q8TEV8 140 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 KCNQ1DNQ9H478 68 aa11.88□□□□□ -0.51
PDLIM7-203ENST00000359895 SERTAD4-AS1Q5TG53 156 aa11.87□□□□□ -0.51
PDLIM7-203ENST00000359895 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
PDLIM7-203ENST00000359895 IMUPQ9GZP8 106 aa11.87□□□□□ -0.51
PDLIM7-203ENST00000359895 COL7A1Q02388 2944 aa11.87□□□□□ -0.51
PDLIM7-203ENST00000359895 LINC00528Q8N1L1 170 aa11.86□□□□□ -0.51
PDLIM7-203ENST00000359895 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
PDLIM7-203ENST00000359895 A0A1B0GV72 72 aa11.85□□□□□ -0.51
PDLIM7-203ENST00000359895 PSCAO43653 123 aa11.84□□□□□ -0.51
PDLIM7-203ENST00000359895 LAMTOR3Q9UHA4 124 aa11.84□□□□□ -0.51
PDLIM7-203ENST00000359895 RBM3P98179 157 aaKnown RBP11.84□□□□□ -0.51
PDLIM7-203ENST00000359895 C14orf177Q52M58 125 aa11.83□□□□□ -0.52
PDLIM7-203ENST00000359895 PRYO14603 147 aa11.82□□□□□ -0.52
PDLIM7-203ENST00000359895 LOC110117498A0A087WWA1 95 aa11.81□□□□□ -0.52
PDLIM7-203ENST00000359895 CNBPP62633 177 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms