RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 SNRPEP62304 92 aaKnown RBP4.03□□□□□ -1.76
HHLA3-201ENST00000359875 UBE2BP63146 152 aa4.03□□□□□ -1.76
HHLA3-201ENST00000359875 PDZD11Q5EBL8 140 aa4.03□□□□□ -1.76
HHLA3-201ENST00000359875 FAM19A5Q7Z5A7 132 aaPredicted RBP4.03□□□□□ -1.76
HHLA3-201ENST00000359875 PRR26Q8N8Z3 221 aa4.03□□□□□ -1.76
HHLA3-201ENST00000359875 A0A096LNJ9 63 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 H3BRM9 83 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 NUPR1O60356 82 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 ATP5LO75964 103 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 YPEL4Q96NS1 127 aa4.02□□□□□ -1.77
HHLA3-201ENST00000359875 SPINK8P0C7L1 97 aa4.01□□□□□ -1.77
HHLA3-201ENST00000359875 IGLC3P0DOY3 106 aa4.01□□□□□ -1.77
HHLA3-201ENST00000359875 NDUFA6P56556 154 aa4.01□□□□□ -1.77
HHLA3-201ENST00000359875 UBE2V1Q13404 147 aa4.01□□□□□ -1.77
HHLA3-201ENST00000359875 C9orf129Q5T035 196 aaKnown RBP4.01□□□□□ -1.77
HHLA3-201ENST00000359875 COX7B2Q8TF08 81 aa4.01□□□□□ -1.77
HHLA3-201ENST00000359875 ZNF861PO60384 105 aa4□□□□□ -1.77
HHLA3-201ENST00000359875 ZNF22P17026 224 aaPredicted RBP4□□□□□ -1.77
HHLA3-201ENST00000359875 PMCHL1Q16048 86 aa4□□□□□ -1.77
HHLA3-201ENST00000359875 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
HHLA3-201ENST00000359875 KRTAP7-1Q8IUC3 87 aa4□□□□□ -1.77
HHLA3-201ENST00000359875 CHCHD1Q96BP2 118 aaKnown RBP4□□□□□ -1.77
HHLA3-201ENST00000359875 TP73-AS1Q9UF72 201 aa4□□□□□ -1.77
HHLA3-201ENST00000359875 IGLV5-39A0A0G2JS06 123 aa3.99□□□□□ -1.77
HHLA3-201ENST00000359875 A0A0U1RQV1 116 aa3.99□□□□□ -1.77
HHLA3-201ENST00000359875 BAGE3Q86Y29 109 aa3.99□□□□□ -1.77
HHLA3-201ENST00000359875 CBLN2Q8IUK8 224 aa3.99□□□□□ -1.77
HHLA3-201ENST00000359875 XAGE1AQ9HD64 81 aa3.99□□□□□ -1.77
HHLA3-201ENST00000359875 C11orf86A6NJI1 115 aa3.98□□□□□ -1.77
HHLA3-201ENST00000359875 HSBP1O75506 76 aa3.98□□□□□ -1.77
HHLA3-201ENST00000359875 RPL28P46779 137 aaKnown RBP3.98□□□□□ -1.77
HHLA3-201ENST00000359875 TMEM170BQ5T4T1 132 aa3.98□□□□□ -1.77
HHLA3-201ENST00000359875 IFI27L1Q96BM0 104 aa3.98□□□□□ -1.77
HHLA3-201ENST00000359875 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
HHLA3-201ENST00000359875 TRAV12-1A0A0B4J245 112 aa3.97□□□□□ -1.77
HHLA3-201ENST00000359875 TRGC2P03986 189 aa3.97□□□□□ -1.77
HHLA3-201ENST00000359875 PRR4Q16378 134 aa3.97□□□□□ -1.77
HHLA3-201ENST00000359875 SFTA2Q6UW10 78 aa3.97□□□□□ -1.77
HHLA3-201ENST00000359875 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
HHLA3-201ENST00000359875 SLC7A5P1Q8MH63 180 aa3.97□□□□□ -1.77
HHLA3-201ENST00000359875 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
HHLA3-201ENST00000359875 BCE1O60756 84 aa3.96□□□□□ -1.78
HHLA3-201ENST00000359875 CRYGAP11844 174 aa3.96□□□□□ -1.78
HHLA3-201ENST00000359875 COX17Q14061 63 aa3.96□□□□□ -1.78
HHLA3-201ENST00000359875 GAGE2AQ6NT46 116 aa3.96□□□□□ -1.78
HHLA3-201ENST00000359875 FAM19A2Q8N3H0 131 aa3.96□□□□□ -1.78
HHLA3-201ENST00000359875 LPAP08519 4548 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 IGLV5-37A0A075B6J1 123 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 ATP6V1G1O75348 118 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 LEPROTL1O95214 131 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 PFN2P35080 140 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 CTAG1AP78358 180 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 NKAPP1Q8N9T2 125 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 MPLKIPQ8TAP9 179 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 ERG28Q9UKR5 140 aa3.95□□□□□ -1.78
HHLA3-201ENST00000359875 TMEM223A0PJW6 202 aa3.94□□□□□ -1.78
HHLA3-201ENST00000359875 COLCA2A8K830 154 aa3.94□□□□□ -1.78
HHLA3-201ENST00000359875 SERF1AO75920 110 aa3.94□□□□□ -1.78
HHLA3-201ENST00000359875 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
HHLA3-201ENST00000359875 TYMSOSQ8TAI1 123 aa3.94□□□□□ -1.78
HHLA3-201ENST00000359875 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
HHLA3-201ENST00000359875 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
HHLA3-201ENST00000359875 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
HHLA3-201ENST00000359875 SND1-IT1Q9HBX3 110 aa3.93□□□□□ -1.78
HHLA3-201ENST00000359875 HSPB8Q9UJY1 196 aa3.93□□□□□ -1.78
HHLA3-201ENST00000359875 MUC2Q02817 5179 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 A0A087X002 238 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 LINC00587B1AMM8 73 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 H0Y8G0 127 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 LINC00158P58513 81 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 HERV-K104P63124 156 aa3.92□□□□□ -1.78
HHLA3-201ENST00000359875 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
HHLA3-201ENST00000359875 IGKV2-28A0A075B6P5 120 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 A0A0U1RRA0 63 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 TSPAN13O95857 204 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 IGKV2D-28P01615 120 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 FABP4P15090 132 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 PLNP26678 52 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 UBE2AP49459 152 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 MEIG1Q5JSS6 88 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 NDUFA12Q9UI09 145 aa3.91□□□□□ -1.78
HHLA3-201ENST00000359875 MYMXA0A1B0GTQ4 84 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 SCO1O75880 301 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 DPM2O94777 84 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 IGKCP01834 107 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 HERVK_113P61574 105 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 TPRXLQ17RH7 258 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 LINC00304Q8N9R0 145 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 PLEKHB2Q96CS7 222 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 MAP1LC3CQ9BXW4 147 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
HHLA3-201ENST00000359875 IGKV2D-26A0A0A0MRZ7 120 aa3.89□□□□□ -1.79
HHLA3-201ENST00000359875 LEPROTO15243 131 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms