RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 C9orf116Q5BN46 136 aaPredicted RBP5.7□□□□□ -1.5
HTT-201ENST00000355072 TSPEAR-AS2P59090 65 aa5.69□□□□□ -1.5
HTT-201ENST00000355072 SMIM29Q86T20 159 aa5.69□□□□□ -1.5
HTT-201ENST00000355072 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.69□□□□□ -1.5
HTT-201ENST00000355072 A8MWP4 228 aa5.69□□□□□ -1.5
HTT-201ENST00000355072 FLNBO75369 2602 aaKnown RBP5.69□□□□□ -1.5
HTT-201ENST00000355072 IGLV1-51P01701 117 aa5.68□□□□□ -1.5
HTT-201ENST00000355072 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
HTT-201ENST00000355072 A0A087WSZ3 146 aa5.68□□□□□ -1.5
HTT-201ENST00000355072 A0A0J9YWU9 116 aa5.68□□□□□ -1.5
HTT-201ENST00000355072 IGHV4-30-4P0DP06 118 aa5.68□□□□□ -1.5
HTT-201ENST00000355072 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
HTT-201ENST00000355072 IGLV4-60A0A075B6I1 120 aa5.68□□□□□ -1.5
HTT-201ENST00000355072 CFAP46Q8IYW2 2715 aa5.67□□□□□ -1.5
HTT-201ENST00000355072 FAM19A4Q96LR4 140 aa5.67□□□□□ -1.5
HTT-201ENST00000355072 C6orf223Q8N319 242 aa5.67□□□□□ -1.5
HTT-201ENST00000355072 EDN2P20800 178 aa5.67□□□□□ -1.5
HTT-201ENST00000355072 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
HTT-201ENST00000355072 LCA10Q71F78 164 aa5.67□□□□□ -1.5
HTT-201ENST00000355072 NBEAL1Q6ZS30 2694 aa5.66□□□□□ -1.5
HTT-201ENST00000355072 FHL2Q14192 279 aa5.66□□□□□ -1.5
HTT-201ENST00000355072 SMCPP49901 116 aaPredicted RBP5.66□□□□□ -1.5
HTT-201ENST00000355072 KLK9Q2XQG4 91 aa5.65□□□□□ -1.5
HTT-201ENST00000355072 PRR9Q5T870 116 aa5.65□□□□□ -1.5
HTT-201ENST00000355072 A8MUN3 132 aa5.65□□□□□ -1.5
HTT-201ENST00000355072 PRR4Q16378 134 aa5.65□□□□□ -1.51
HTT-201ENST00000355072 LINC01556Q5JQF7 62 aa5.65□□□□□ -1.51
HTT-201ENST00000355072 BAHCC1Q9P281 2608 aa5.64□□□□□ -1.51
HTT-201ENST00000355072 STAB2Q8WWQ8 2551 aa5.64□□□□□ -1.51
HTT-201ENST00000355072 H7BZZ5 65 aa5.63□□□□□ -1.51
HTT-201ENST00000355072 BBC3Q96PG8 261 aaPredicted RBP5.63□□□□□ -1.51
HTT-201ENST00000355072 UNQ6190/PRO20217Q6UXQ8 127 aa5.63□□□□□ -1.51
HTT-201ENST00000355072 COX6A2Q02221 97 aa5.63□□□□□ -1.51
HTT-201ENST00000355072 IGHV4-31P0DP07 118 aa5.63□□□□□ -1.51
HTT-201ENST00000355072 EP400Q96L91 3159 aa5.63□□□□□ -1.51
HTT-201ENST00000355072 WISP2O76076 250 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 IGLV9-49A0A0B4J1Y8 123 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 TM2D3Q9BRN9 247 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 C16orf95Q9H693 158 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 FHL3Q13643 280 aa5.62□□□□□ -1.51
HTT-201ENST00000355072 AVPP01185 164 aa5.61□□□□□ -1.51
HTT-201ENST00000355072 Q6ZRP5 223 aa5.61□□□□□ -1.51
HTT-201ENST00000355072 SPINK6Q6UWN8 80 aa5.61□□□□□ -1.51
HTT-201ENST00000355072 KIF25-AS1Q9Y6Z4 181 aa5.6□□□□□ -1.51
HTT-201ENST00000355072 MSMPQ1L6U9 139 aa5.6□□□□□ -1.51
HTT-201ENST00000355072 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
HTT-201ENST00000355072 COA5Q86WW8 74 aa5.6□□□□□ -1.51
HTT-201ENST00000355072 C1orf229Q6ZS94 237 aaPredicted RBP5.6□□□□□ -1.51
HTT-201ENST00000355072 MDFIQ99750 246 aa5.59□□□□□ -1.51
HTT-201ENST00000355072 LINC00313P59037 77 aa5.59□□□□□ -1.51
HTT-201ENST00000355072 CIRBP-AS1Q8TBR5 109 aa5.59□□□□□ -1.51
HTT-201ENST00000355072 LITAFQ99732 161 aa5.59□□□□□ -1.51
HTT-201ENST00000355072 Q6ZRU5 148 aa5.59□□□□□ -1.51
HTT-201ENST00000355072 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.52
HTT-201ENST00000355072 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.52
HTT-201ENST00000355072 LUZP6Q538Z0 58 aa5.59□□□□□ -1.52
HTT-201ENST00000355072 C10orf142B7Z368 130 aa5.58□□□□□ -1.52
HTT-201ENST00000355072 MAPK1IP1LQ8NDC0 245 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 GRNP28799 593 aaKnown RBP5.57□□□□□ -1.52
HTT-201ENST00000355072 ODF3L2Q3SX64 289 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 PROK1P58294 105 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 KCNQ1DNQ9H478 68 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 EPM2AB3EWF7 344 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 LINC01006Q8NI28 216 aa5.57□□□□□ -1.52
HTT-201ENST00000355072 FLNAP21333 2647 aaKnown RBP5.56□□□□□ -1.52
HTT-201ENST00000355072 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
HTT-201ENST00000355072 Q75L30 129 aa5.55□□□□□ -1.52
HTT-201ENST00000355072 Q8NA96 180 aa5.55□□□□□ -1.52
HTT-201ENST00000355072 DEFB4AO15263 64 aa5.55□□□□□ -1.52
HTT-201ENST00000355072 PCOTHQ58A44 107 aa5.55□□□□□ -1.52
HTT-201ENST00000355072 OBSCN-AS1Q96MR7 158 aa5.55□□□□□ -1.52
HTT-201ENST00000355072 A0A096LNI7 61 aa5.54□□□□□ -1.52
HTT-201ENST00000355072 LINC00336Q6ZUF6 198 aa5.54□□□□□ -1.52
HTT-201ENST00000355072 GAS8-AS1O95177 125 aa5.54□□□□□ -1.52
HTT-201ENST00000355072 IGLV5-52A0A0A0MRZ9 124 aa5.54□□□□□ -1.52
HTT-201ENST00000355072 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
HTT-201ENST00000355072 CDSNQ15517 529 aa5.54□□□□□ -1.52
HTT-201ENST00000355072 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
HTT-201ENST00000355072 DEFB1P60022 68 aa5.53□□□□□ -1.52
HTT-201ENST00000355072 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
HTT-201ENST00000355072 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
HTT-201ENST00000355072 LINC00315P59091 139 aa5.52□□□□□ -1.53
HTT-201ENST00000355072 FAM218AQ96MZ4 157 aa5.51□□□□□ -1.53
HTT-201ENST00000355072 GCN1Q92616 2671 aaKnown RBP5.51□□□□□ -1.53
HTT-201ENST00000355072 C19orf84I3L1E1 186 aa5.51□□□□□ -1.53
HTT-201ENST00000355072 X6R8D5 127 aa5.51□□□□□ -1.53
HTT-201ENST00000355072 PRLHP81277 87 aa5.51□□□□□ -1.53
HTT-201ENST00000355072 KIAA0087Q14695 138 aa5.51□□□□□ -1.53
HTT-201ENST00000355072 SMCR5Q8TEV8 140 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 FAM104AQ969W3 186 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
HTT-201ENST00000355072 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 C22orf24Q9Y442 160 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 IGKV2-30P06310 120 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 A0A087X002 238 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms