RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
PMS1-201ENST00000342075 COX17Q14061 63 aa8.93□□□□□ -0.98
PMS1-201ENST00000342075 PANO1I0J062 215 aa8.92□□□□□ -0.98
PMS1-201ENST00000342075 M0R143 59 aa8.92□□□□□ -0.98
PMS1-201ENST00000342075 A0A096LNI7 61 aa8.92□□□□□ -0.98
PMS1-201ENST00000342075 TAL2Q16559 108 aa8.92□□□□□ -0.98
PMS1-201ENST00000342075 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
PMS1-201ENST00000342075 NAA38Q9BRA0 125 aaKnown RBP8.92□□□□□ -0.98
PMS1-201ENST00000342075 RAB37Q96AX2 223 aa8.91□□□□□ -0.98
PMS1-201ENST00000342075 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
PMS1-201ENST00000342075 CFC1P0CG37 223 aa8.91□□□□□ -0.98
PMS1-201ENST00000342075 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
PMS1-201ENST00000342075 IGKV2-28A0A075B6P5 120 aa8.9□□□□□ -0.99
PMS1-201ENST00000342075 NCR3O14931 201 aa8.9□□□□□ -0.99
PMS1-201ENST00000342075 IGKV2D-28P01615 120 aa8.9□□□□□ -0.99
PMS1-201ENST00000342075 C9orf163Q8N9P6 203 aa8.89□□□□□ -0.99
PMS1-201ENST00000342075 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
PMS1-201ENST00000342075 H7C2G1 150 aa8.88□□□□□ -0.99
PMS1-201ENST00000342075 RPL24P83731 157 aaKnown RBP8.88□□□□□ -0.99
PMS1-201ENST00000342075 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
PMS1-201ENST00000342075 IGLV5-52A0A0A0MRZ9 124 aa8.88□□□□□ -0.99
PMS1-201ENST00000342075 F8WDY8 70 aa8.88□□□□□ -0.99
PMS1-201ENST00000342075 IFITM1P13164 125 aa8.88□□□□□ -0.99
PMS1-201ENST00000342075 RNF151Q2KHN1 245 aa8.87□□□□□ -0.99
PMS1-201ENST00000342075 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
PMS1-201ENST00000342075 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
PMS1-201ENST00000342075 DNAH8Q96JB1 4490 aa8.87□□□□□ -0.99
PMS1-201ENST00000342075 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
PMS1-201ENST00000342075 TLX1NBP0CAT3 122 aa8.86□□□□□ -0.99
PMS1-201ENST00000342075 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
PMS1-201ENST00000342075 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
PMS1-201ENST00000342075 HAMPP81172 84 aa8.85□□□□□ -0.99
PMS1-201ENST00000342075 GAGE10A6NGK3 116 aa8.84□□□□□ -0.99
PMS1-201ENST00000342075 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
PMS1-201ENST00000342075 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
PMS1-201ENST00000342075 TAX1BP3O14907 124 aa8.84□□□□□ -0.99
PMS1-201ENST00000342075 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
PMS1-201ENST00000342075 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
PMS1-201ENST00000342075 A6NJY4 79 aa8.83□□□□□ -1
PMS1-201ENST00000342075 VPREB1P12018 145 aa8.83□□□□□ -1
PMS1-201ENST00000342075 LRP1BQ9NZR2 4599 aa8.83□□□□□ -1
PMS1-201ENST00000342075 A6NDN8 102 aa8.83□□□□□ -1
PMS1-201ENST00000342075 C16orf90A8MZG2 172 aa8.83□□□□□ -1
PMS1-201ENST00000342075 A0A1B0GWB2 263 aa8.83□□□□□ -1
PMS1-201ENST00000342075 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
PMS1-201ENST00000342075 OR13C6PQ8NH95 151 aa8.82□□□□□ -1
PMS1-201ENST00000342075 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
PMS1-201ENST00000342075 COL5A1-AS1Q5SY13 56 aa8.81□□□□□ -1
PMS1-201ENST00000342075 DYNC1H1Q14204 4646 aaKnown RBP8.81□□□□□ -1
PMS1-201ENST00000342075 TSPAN13O95857 204 aa8.81□□□□□ -1
PMS1-201ENST00000342075 FAM30AQ9NZY2 134 aa8.81□□□□□ -1
PMS1-201ENST00000342075 PRO1854Q9UHT4 67 aa8.8□□□□□ -1
PMS1-201ENST00000342075 A0A0B4J2C4 111 aa8.8□□□□□ -1
PMS1-201ENST00000342075 KRTAP10-1P60331 282 aa8.8□□□□□ -1
PMS1-201ENST00000342075 RPL37AP8A6NKH3 93 aa8.79□□□□□ -1
PMS1-201ENST00000342075 COPS9Q8WXC6 57 aa8.79□□□□□ -1
PMS1-201ENST00000342075 DPH3Q96FX2 82 aa8.79□□□□□ -1
PMS1-201ENST00000342075 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
PMS1-201ENST00000342075 H3BUT2 72 aa8.78□□□□□ -1
PMS1-201ENST00000342075 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
PMS1-201ENST00000342075 NDUFC2O95298 119 aa8.78□□□□□ -1
PMS1-201ENST00000342075 Q1RN00 199 aa8.78□□□□□ -1
PMS1-201ENST00000342075 A0A1B0GVY2 172 aa8.78□□□□□ -1
PMS1-201ENST00000342075 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
PMS1-201ENST00000342075 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
PMS1-201ENST00000342075 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
PMS1-201ENST00000342075 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
PMS1-201ENST00000342075 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
PMS1-201ENST00000342075 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
PMS1-201ENST00000342075 NKAPP1Q8N9T2 125 aa8.76□□□□□ -1.01
PMS1-201ENST00000342075 A0A087WYN8 130 aa8.76□□□□□ -1.01
PMS1-201ENST00000342075 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
PMS1-201ENST00000342075 A0A1B0GV90 55 aa8.75□□□□□ -1.01
PMS1-201ENST00000342075 M0QXV9 152 aa8.75□□□□□ -1.01
PMS1-201ENST00000342075 S100A7L2Q5SY68 101 aa8.75□□□□□ -1.01
PMS1-201ENST00000342075 LINC00336Q6ZUF6 198 aa8.75□□□□□ -1.01
PMS1-201ENST00000342075 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
PMS1-201ENST00000342075 TRIAP1O43715 76 aa8.74□□□□□ -1.01
PMS1-201ENST00000342075 LINC00167Q96N53 147 aa8.74□□□□□ -1.01
PMS1-201ENST00000342075 TRAV13-2A0A0B4J235 113 aa8.74□□□□□ -1.01
PMS1-201ENST00000342075 C9orf118A6NHY6 69 aa8.73□□□□□ -1.01
PMS1-201ENST00000342075 IGLV6-57P01721 117 aa8.73□□□□□ -1.01
PMS1-201ENST00000342075 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
PMS1-201ENST00000342075 M0R378 163 aa8.72□□□□□ -1.01
PMS1-201ENST00000342075 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
PMS1-201ENST00000342075 PSMB2P49721 201 aa8.72□□□□□ -1.01
PMS1-201ENST00000342075 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
PMS1-201ENST00000342075 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
PMS1-201ENST00000342075 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
PMS1-201ENST00000342075 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
PMS1-201ENST00000342075 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
PMS1-201ENST00000342075 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
PMS1-201ENST00000342075 CIRBP-AS1Q8TBR5 109 aa8.7□□□□□ -1.02
PMS1-201ENST00000342075 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
PMS1-201ENST00000342075 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
PMS1-201ENST00000342075 LINC00474Q9P2X8 69 aa8.69□□□□□ -1.02
PMS1-201ENST00000342075 TRAV23DV6A0A075B6W5 121 aa8.69□□□□□ -1.02
PMS1-201ENST00000342075 LBHQ53QV2 105 aaPredicted RBP8.69□□□□□ -1.02
PMS1-201ENST00000342075 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
PMS1-201ENST00000342075 VPS13BQ7Z7G8 4022 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms