RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 LYRM7Q5U5X0 104 aa14.13□□□□□ -0.15
SOX18-201ENST00000340356 TRBV30A0A0K0K1B3 111 aa14.12□□□□□ -0.15
SOX18-201ENST00000340356 IGKV2-28A0A075B6P5 120 aa14.11□□□□□ -0.15
SOX18-201ENST00000340356 H3BMG7 143 aa14.11□□□□□ -0.15
SOX18-201ENST00000340356 IGKV2D-28P01615 120 aa14.11□□□□□ -0.15
SOX18-201ENST00000340356 TRIAP1O43715 76 aa14.1□□□□□ -0.15
SOX18-201ENST00000340356 DNAH6Q9C0G6 4158 aa14.1□□□□□ -0.15
SOX18-201ENST00000340356 LRCOL1A6NCL2 159 aa14.1□□□□□ -0.15
SOX18-201ENST00000340356 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
SOX18-201ENST00000340356 CARD19Q96LW7 228 aa14.09□□□□□ -0.15
SOX18-201ENST00000340356 TRAV13-2A0A0B4J235 113 aa14.08□□□□□ -0.16
SOX18-201ENST00000340356 F8WDY8 70 aa14.08□□□□□ -0.16
SOX18-201ENST00000340356 TCL1BO95988 128 aa14.08□□□□□ -0.16
SOX18-201ENST00000340356 HYDINQ4G0P3 5121 aa14.07□□□□□ -0.16
SOX18-201ENST00000340356 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.05□□□□□ -0.16
SOX18-201ENST00000340356 TRBV20-1A0A075B6N2 111 aa14.05□□□□□ -0.16
SOX18-201ENST00000340356 C1orf134Q5TEV5 83 aa14.04□□□□□ -0.16
SOX18-201ENST00000340356 COX6CP09669 75 aa14.03□□□□□ -0.16
SOX18-201ENST00000340356 Q6ZRP5 223 aa14.03□□□□□ -0.16
SOX18-201ENST00000340356 MTURNQ8N3F0 131 aa14.03□□□□□ -0.16
SOX18-201ENST00000340356 XAGE1AQ9HD64 81 aa14.03□□□□□ -0.16
SOX18-201ENST00000340356 NDUFC2-KCTD14E9PQ53 114 aa14.02□□□□□ -0.16
SOX18-201ENST00000340356 PRR3P79522 188 aaKnown RBP14.02□□□□□ -0.16
SOX18-201ENST00000340356 Q8NDZ9 215 aa14.02□□□□□ -0.16
SOX18-201ENST00000340356 NDUFC2O95298 119 aa14.01□□□□□ -0.17
SOX18-201ENST00000340356 GAGE2EQ4V326 116 aa14.01□□□□□ -0.17
SOX18-201ENST00000340356 OR13C6PQ8NH95 151 aa14.01□□□□□ -0.17
SOX18-201ENST00000340356 GAGE2DQ9UEU5 116 aa14.01□□□□□ -0.17
SOX18-201ENST00000340356 C14orf177Q52M58 125 aa14□□□□□ -0.17
SOX18-201ENST00000340356 RNF151Q2KHN1 245 aa13.99□□□□□ -0.17
SOX18-201ENST00000340356 A0A087WTM6 91 aa13.99□□□□□ -0.17
SOX18-201ENST00000340356 CNBPP62633 177 aaKnown RBP13.99□□□□□ -0.17
SOX18-201ENST00000340356 RPL18AQ02543 176 aaKnown RBP13.98□□□□□ -0.17
SOX18-201ENST00000340356 CLEC2BQ92478 149 aa13.98□□□□□ -0.17
SOX18-201ENST00000340356 F8W1H4 67 aa13.97□□□□□ -0.17
SOX18-201ENST00000340356 NCR3O14931 201 aa13.97□□□□□ -0.17
SOX18-201ENST00000340356 ATXN8Q156A1 80 aa13.97□□□□□ -0.17
SOX18-201ENST00000340356 Q8N814 137 aa13.97□□□□□ -0.17
SOX18-201ENST00000340356 PRO0461Q9UI25 63 aa13.97□□□□□ -0.17
SOX18-201ENST00000340356 SACSQ9NZJ4 4579 aa13.96□□□□□ -0.17
SOX18-201ENST00000340356 RPL28P46779 137 aaKnown RBP13.96□□□□□ -0.17
SOX18-201ENST00000340356 SMIM11BQ8TCY0 68 aa13.96□□□□□ -0.17
SOX18-201ENST00000340356 TLX1NBP0CAT3 122 aa13.95□□□□□ -0.18
SOX18-201ENST00000340356 DNAH17Q9UFH2 4485 aa13.95□□□□□ -0.18
SOX18-201ENST00000340356 FUSP35637 526 aaKnown RBP eCLIP13.94□□□□□ -0.18
SOX18-201ENST00000340356 C9orf129Q5T035 196 aaKnown RBP13.94□□□□□ -0.18
SOX18-201ENST00000340356 FRAS1Q86XX4 4008 aa13.94□□□□□ -0.18
SOX18-201ENST00000340356 LINC01620Q4KN68 170 aa13.93□□□□□ -0.18
SOX18-201ENST00000340356 RTL8CO15255 209 aa13.93□□□□□ -0.18
SOX18-201ENST00000340356 GAGE2BQ13066 116 aa13.93□□□□□ -0.18
SOX18-201ENST00000340356 TNP2Q05952 138 aa13.92□□□□□ -0.18
SOX18-201ENST00000340356 LST1O00453 97 aa13.91□□□□□ -0.18
SOX18-201ENST00000340356 LOC107984640A0A0U1RRK4 108 aa13.91□□□□□ -0.18
SOX18-201ENST00000340356 LCE6AA0A183 80 aa13.91□□□□□ -0.18
SOX18-201ENST00000340356 C9JAW5 83 aa13.91□□□□□ -0.18
SOX18-201ENST00000340356 SMCPP49901 116 aaPredicted RBP13.91□□□□□ -0.18
SOX18-201ENST00000340356 TMEM126AQ9H061 195 aa13.9□□□□□ -0.18
SOX18-201ENST00000340356 S100A7L2Q5SY68 101 aa13.89□□□□□ -0.19
SOX18-201ENST00000340356 C9orf163Q8N9P6 203 aa13.88□□□□□ -0.19
SOX18-201ENST00000340356 HECTD4Q9Y4D8 3996 aa13.87□□□□□ -0.19
SOX18-201ENST00000340356 A0A096LNI7 61 aa13.87□□□□□ -0.19
SOX18-201ENST00000340356 VPREB1P12018 145 aa13.87□□□□□ -0.19
SOX18-201ENST00000340356 TRBV10-2A0A0K0K1G8 114 aa13.86□□□□□ -0.19
SOX18-201ENST00000340356 FAM168BA1KXE4 195 aa13.86□□□□□ -0.19
SOX18-201ENST00000340356 SLC25A20O43772 301 aa13.86□□□□□ -0.19
SOX18-201ENST00000340356 SERTAD4-AS1Q5TG53 156 aa13.86□□□□□ -0.19
SOX18-201ENST00000340356 FAM218AQ96MZ4 157 aa13.86□□□□□ -0.19
SOX18-201ENST00000340356 ETDBQ3ZM63 59 aa13.85□□□□□ -0.19
SOX18-201ENST00000340356 OCIAD2Q56VL3 154 aa13.85□□□□□ -0.19
SOX18-201ENST00000340356 IGKV2-24A0A0C4DH68 120 aa13.84□□□□□ -0.19
SOX18-201ENST00000340356 IGLV6-57P01721 117 aa13.82□□□□□ -0.2
SOX18-201ENST00000340356 C16orf90A8MZG2 172 aa13.82□□□□□ -0.2
SOX18-201ENST00000340356 K7ERU9 68 aa13.82□□□□□ -0.2
SOX18-201ENST00000340356 CHTF8P0CG12 524 aa13.82□□□□□ -0.2
SOX18-201ENST00000340356 KRTAP7-1Q8IUC3 87 aa13.82□□□□□ -0.2
SOX18-201ENST00000340356 H0YGX0 51 aa13.81□□□□□ -0.2
SOX18-201ENST00000340356 SDIM1Q6ZPB5 146 aa13.81□□□□□ -0.2
SOX18-201ENST00000340356 FAT2Q9NYQ8 4349 aa13.81□□□□□ -0.2
SOX18-201ENST00000340356 TRBV10-3A0A0K0K1G6 114 aa13.8□□□□□ -0.2
SOX18-201ENST00000340356 DNAH11Q96DT5 4516 aa13.79□□□□□ -0.2
SOX18-201ENST00000340356 A0A087WYN8 130 aa13.79□□□□□ -0.2
SOX18-201ENST00000340356 TRACP01848 142 aa13.79□□□□□ -0.2
SOX18-201ENST00000340356 ANKRD29Q8N6D5 301 aa13.79□□□□□ -0.2
SOX18-201ENST00000340356 C6orf99Q4VX62 202 aa13.78□□□□□ -0.2
SOX18-201ENST00000340356 FAM19A5Q7Z5A7 132 aaPredicted RBP13.78□□□□□ -0.2
SOX18-201ENST00000340356 M0R378 163 aa13.78□□□□□ -0.2
SOX18-201ENST00000340356 KMT2CQ8NEZ4 4911 aaKnown RBP13.77□□□□□ -0.2
SOX18-201ENST00000340356 PANO1I0J062 215 aa13.77□□□□□ -0.21
SOX18-201ENST00000340356 PLA2G2DQ9UNK4 145 aa13.77□□□□□ -0.21
SOX18-201ENST00000340356 IGLV5-52A0A0A0MRZ9 124 aa13.76□□□□□ -0.21
SOX18-201ENST00000340356 M0QXV9 152 aa13.76□□□□□ -0.21
SOX18-201ENST00000340356 KRTAP10-2P60368 255 aa13.76□□□□□ -0.21
SOX18-201ENST00000340356 A0A1W2PNN7 141 aa13.75□□□□□ -0.21
SOX18-201ENST00000340356 H3BT86 120 aa13.75□□□□□ -0.21
SOX18-201ENST00000340356 TEN1Q86WV5 123 aa13.75□□□□□ -0.21
SOX18-201ENST00000340356 NKAPP1Q8N9T2 125 aa13.75□□□□□ -0.21
SOX18-201ENST00000340356 RYR2Q92736 4967 aa13.74□□□□□ -0.21
SOX18-201ENST00000340356 TRAV23DV6A0A075B6W5 121 aa13.74□□□□□ -0.21
SOX18-201ENST00000340356 C7orf33Q8WU49 177 aa13.74□□□□□ -0.21
SOX18-201ENST00000340356 LINC01600Q96MT4 127 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms