RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 LINC00643Q86TS7 51 aa5.77□□□□□ -1.49
HPS4-201ENST00000336873 PKD1L1Q8TDX9 2849 aa5.77□□□□□ -1.49
HPS4-201ENST00000336873 CELA1Q9UNI1 258 aa5.77□□□□□ -1.49
HPS4-201ENST00000336873 ANK2Q01484 3957 aa5.76□□□□□ -1.49
HPS4-201ENST00000336873 CXCL5P42830 114 aa5.76□□□□□ -1.49
HPS4-201ENST00000336873 C9orf66Q5T8R8 295 aa5.76□□□□□ -1.49
HPS4-201ENST00000336873 IGKV2-28A0A075B6P5 120 aa5.76□□□□□ -1.49
HPS4-201ENST00000336873 TIMM17BO60830 172 aa5.76□□□□□ -1.49
HPS4-201ENST00000336873 IGKV2D-28P01615 120 aa5.76□□□□□ -1.49
HPS4-201ENST00000336873 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
HPS4-201ENST00000336873 GIG44P09565 113 aaPredicted RBP5.75□□□□□ -1.49
HPS4-201ENST00000336873 IGHV4-30-4P0DP06 118 aa5.75□□□□□ -1.49
HPS4-201ENST00000336873 FAM104AQ969W3 186 aa5.75□□□□□ -1.49
HPS4-201ENST00000336873 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
HPS4-201ENST00000336873 IGHV3OR16-9A0A0B4J2B5 98 aa5.74□□□□□ -1.49
HPS4-201ENST00000336873 CYSRT1A8MQ03 144 aa5.74□□□□□ -1.49
HPS4-201ENST00000336873 FSHBP01225 129 aa5.73□□□□□ -1.49
HPS4-201ENST00000336873 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
HPS4-201ENST00000336873 Q6ZQY7 126 aa5.73□□□□□ -1.49
HPS4-201ENST00000336873 C10orf25Q5T742 122 aa5.73□□□□□ -1.49
HPS4-201ENST00000336873 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
HPS4-201ENST00000336873 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
HPS4-201ENST00000336873 IBA57-AS1B1ANH7 110 aa5.72□□□□□ -1.49
HPS4-201ENST00000336873 H0YGX0 51 aa5.72□□□□□ -1.49
HPS4-201ENST00000336873 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
HPS4-201ENST00000336873 ENHOQ6UWT2 76 aa5.72□□□□□ -1.49
HPS4-201ENST00000336873 STAB2Q8WWQ8 2551 aa5.72□□□□□ -1.49
HPS4-201ENST00000336873 IGKV2-24A0A0C4DH68 120 aa5.72□□□□□ -1.49
HPS4-201ENST00000336873 A0A096LNI7 61 aa5.72□□□□□ -1.49
HPS4-201ENST00000336873 NANOS2P60321 138 aaKnown RBP5.72□□□□□ -1.49
HPS4-201ENST00000336873 A0A087WZ39 114 aa5.71□□□□□ -1.49
HPS4-201ENST00000336873 IGLV5-39A0A0G2JS06 123 aa5.71□□□□□ -1.49
HPS4-201ENST00000336873 Q6ZTC4 211 aa5.71□□□□□ -1.49
HPS4-201ENST00000336873 LINC00336Q6ZUF6 198 aa5.71□□□□□ -1.49
HPS4-201ENST00000336873 SBSPONQ8IVN8 264 aa5.71□□□□□ -1.49
HPS4-201ENST00000336873 SERP2Q8N6R1 65 aa5.71□□□□□ -1.49
HPS4-201ENST00000336873 WFDC10BQ8IUB3 73 aa5.71□□□□□ -1.5
HPS4-201ENST00000336873 NKAPP1Q8N9T2 125 aa5.71□□□□□ -1.5
HPS4-201ENST00000336873 RPL37AP8A6NKH3 93 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 PSCAO43653 123 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 KPRPQ5T749 579 aaPredicted RBP5.7□□□□□ -1.5
HPS4-201ENST00000336873 KRTAP1-3Q8IUG1 177 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 LINC00846Q9NV44 126 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 GHRHP01286 108 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 KRTAP10-3P60369 221 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 CD164L2Q6UWJ8 174 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 IL17DQ8TAD2 202 aa5.7□□□□□ -1.5
HPS4-201ENST00000336873 C3orf84H3BNL1 204 aa5.69□□□□□ -1.5
HPS4-201ENST00000336873 TENM3Q9P273 2699 aa5.69□□□□□ -1.5
HPS4-201ENST00000336873 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
HPS4-201ENST00000336873 MRPL55Q7Z7F7 128 aaKnown RBP5.69□□□□□ -1.5
HPS4-201ENST00000336873 PLAC8L1A1L4L8 177 aa5.69□□□□□ -1.5
HPS4-201ENST00000336873 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.68□□□□□ -1.5
HPS4-201ENST00000336873 TRBV7-7A0A0K0K1E9 115 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 USP17L23D6RBM5 183 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 C16orf95Q9H693 158 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 X6R8D5 127 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 A0A0J9YWU9 116 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 FAM19A1Q7Z5A9 133 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
HPS4-201ENST00000336873 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
HPS4-201ENST00000336873 CRYGAP11844 174 aa5.67□□□□□ -1.5
HPS4-201ENST00000336873 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
HPS4-201ENST00000336873 RPL28P46779 137 aaKnown RBP5.67□□□□□ -1.5
HPS4-201ENST00000336873 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
HPS4-201ENST00000336873 LYRM9A8MSI8 78 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 UBE2BP63146 152 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 C11orf45Q8TAV5 145 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 TMEM256-PLSCR3K7ERE1 68 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 DIRC1Q969H9 104 aa5.66□□□□□ -1.5
HPS4-201ENST00000336873 Q8N9L7 120 aa5.65□□□□□ -1.5
HPS4-201ENST00000336873 SNURFQ9Y675 71 aa5.65□□□□□ -1.5
HPS4-201ENST00000336873 TENM2Q9NT68 2774 aa5.65□□□□□ -1.5
HPS4-201ENST00000336873 NDUFC2-KCTD14E9PQ53 114 aa5.65□□□□□ -1.5
HPS4-201ENST00000336873 Q8IZM0 81 aa5.65□□□□□ -1.5
HPS4-201ENST00000336873 C2orf48Q96LS8 159 aa5.65□□□□□ -1.5
HPS4-201ENST00000336873 UPK3BQ9BT76 320 aa5.64□□□□□ -1.51
HPS4-201ENST00000336873 Q8N814 137 aa5.64□□□□□ -1.51
HPS4-201ENST00000336873 LYSTQ99698 3801 aa5.64□□□□□ -1.51
HPS4-201ENST00000336873 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
HPS4-201ENST00000336873 MIFP14174 115 aa5.63□□□□□ -1.51
HPS4-201ENST00000336873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
HPS4-201ENST00000336873 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
HPS4-201ENST00000336873 KRTAP1-1Q07627 177 aa5.63□□□□□ -1.51
HPS4-201ENST00000336873 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
HPS4-201ENST00000336873 SERP1Q9Y6X1 66 aa5.63□□□□□ -1.51
HPS4-201ENST00000336873 COX7BP24311 80 aa5.62□□□□□ -1.51
HPS4-201ENST00000336873 LELP1Q5T871 98 aa5.62□□□□□ -1.51
HPS4-201ENST00000336873 CCKP06307 115 aa5.62□□□□□ -1.51
HPS4-201ENST00000336873 LYPD5Q6UWN5 251 aa5.62□□□□□ -1.51
HPS4-201ENST00000336873 Q6ZRU5 148 aa5.62□□□□□ -1.51
HPS4-201ENST00000336873 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
HPS4-201ENST00000336873 DEFB116Q30KQ4 102 aa5.61□□□□□ -1.51
HPS4-201ENST00000336873 LINC01561Q8N1V8 128 aa5.61□□□□□ -1.51
HPS4-201ENST00000336873 ZNF73O43830 326 aaPredicted RBP5.61□□□□□ -1.51
HPS4-201ENST00000336873 NREPQ16612 68 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms