RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
PTCH1-201ENST00000331920 FAM19A4Q96LR4 140 aa11.46□□□□□ -0.57
PTCH1-201ENST00000331920 IGLV6-57P01721 117 aa11.45□□□□□ -0.58
PTCH1-201ENST00000331920 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
PTCH1-201ENST00000331920 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
PTCH1-201ENST00000331920 FHL3Q13643 280 aa11.43□□□□□ -0.58
PTCH1-201ENST00000331920 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
PTCH1-201ENST00000331920 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
PTCH1-201ENST00000331920 URB1-AS1Q96HZ7 61 aa11.41□□□□□ -0.58
PTCH1-201ENST00000331920 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
PTCH1-201ENST00000331920 A0A0D9SG42 100 aa11.4□□□□□ -0.59
PTCH1-201ENST00000331920 KRTAP10-9P60411 292 aa11.4□□□□□ -0.59
PTCH1-201ENST00000331920 CDSNQ15517 529 aa11.4□□□□□ -0.59
PTCH1-201ENST00000331920 FN1P02751 2386 aaKnown RBP11.39□□□□□ -0.59
PTCH1-201ENST00000331920 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
PTCH1-201ENST00000331920 PIEZO2Q9H5I5 2752 aa11.39□□□□□ -0.59
PTCH1-201ENST00000331920 C9orf92A6NGG3 77 aa11.39□□□□□ -0.59
PTCH1-201ENST00000331920 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
PTCH1-201ENST00000331920 RTL8CO15255 209 aa11.39□□□□□ -0.59
PTCH1-201ENST00000331920 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-201ENST00000331920 CDIP1Q9H305 208 aa11.37□□□□□ -0.59
PTCH1-201ENST00000331920 Q8NBF4 154 aa11.37□□□□□ -0.59
PTCH1-201ENST00000331920 ST20-AS1Q8NBB2 130 aa11.37□□□□□ -0.59
PTCH1-201ENST00000331920 COA5Q86WW8 74 aa11.36□□□□□ -0.59
PTCH1-201ENST00000331920 UQCR11O14957 56 aa11.36□□□□□ -0.59
PTCH1-201ENST00000331920 MIR22HGQ0VDD5 57 aa11.35□□□□□ -0.59
PTCH1-201ENST00000331920 LUZP6Q538Z0 58 aa11.35□□□□□ -0.59
PTCH1-201ENST00000331920 Q6ZRP5 223 aa11.34□□□□□ -0.59
PTCH1-201ENST00000331920 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
PTCH1-201ENST00000331920 LTBP2Q14767 1821 aa11.33□□□□□ -0.6
PTCH1-201ENST00000331920 LINC01561Q8N1V8 128 aa11.33□□□□□ -0.6
PTCH1-201ENST00000331920 A8MUN3 132 aa11.33□□□□□ -0.6
PTCH1-201ENST00000331920 LINC00310P59036 64 aa11.33□□□□□ -0.6
PTCH1-201ENST00000331920 C11orf72Q8NBR9 251 aa11.33□□□□□ -0.6
PTCH1-201ENST00000331920 K7EQZ3 153 aa11.31□□□□□ -0.6
PTCH1-201ENST00000331920 KIF25-AS1Q9Y6Z4 181 aa11.31□□□□□ -0.6
PTCH1-201ENST00000331920 Q6ZQT0 140 aa11.31□□□□□ -0.6
PTCH1-201ENST00000331920 FAM218AQ96MZ4 157 aa11.3□□□□□ -0.6
PTCH1-201ENST00000331920 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
PTCH1-201ENST00000331920 H3BPC8 53 aa11.29□□□□□ -0.6
PTCH1-201ENST00000331920 LINC00315P59091 139 aa11.28□□□□□ -0.6
PTCH1-201ENST00000331920 ELOF1P60002 83 aaKnown RBP11.28□□□□□ -0.6
PTCH1-201ENST00000331920 DSCR10P59022 87 aa11.28□□□□□ -0.6
PTCH1-201ENST00000331920 TRBV7-4A0A0J9YYF1 115 aa11.28□□□□□ -0.6
PTCH1-201ENST00000331920 C16orf95Q9H693 158 aa11.27□□□□□ -0.6
PTCH1-201ENST00000331920 Q6ZRX8 168 aa11.27□□□□□ -0.61
PTCH1-201ENST00000331920 OBSCN-AS1Q96MR7 158 aa11.27□□□□□ -0.61
PTCH1-201ENST00000331920 LOC101927531A0A1B0GV80 90 aa11.25□□□□□ -0.61
PTCH1-201ENST00000331920 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
PTCH1-201ENST00000331920 ZNF575Q86XF7 245 aa11.23□□□□□ -0.61
PTCH1-201ENST00000331920 A0A096LNJ9 63 aa11.23□□□□□ -0.61
PTCH1-201ENST00000331920 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
PTCH1-201ENST00000331920 A8MWP4 228 aa11.22□□□□□ -0.61
PTCH1-201ENST00000331920 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.61
PTCH1-201ENST00000331920 RPS28P62857 69 aaKnown RBP11.2□□□□□ -0.62
PTCH1-201ENST00000331920 CDC42SE1Q9NRR8 79 aa11.2□□□□□ -0.62
PTCH1-201ENST00000331920 BCE1O60756 84 aa11.2□□□□□ -0.62
PTCH1-201ENST00000331920 ZNF462Q96JM2 2506 aa11.19□□□□□ -0.62
PTCH1-201ENST00000331920 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
PTCH1-201ENST00000331920 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
PTCH1-201ENST00000331920 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
PTCH1-201ENST00000331920 LOC110117498A0A087WWA1 95 aa11.16□□□□□ -0.62
PTCH1-201ENST00000331920 JMJD1CQ15652 2540 aa11.16□□□□□ -0.62
PTCH1-201ENST00000331920 CYP4F30PQ9H0H9 118 aa11.15□□□□□ -0.62
PTCH1-201ENST00000331920 IGLV5-39A0A0G2JS06 123 aa11.15□□□□□ -0.63
PTCH1-201ENST00000331920 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
PTCH1-201ENST00000331920 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
PTCH1-201ENST00000331920 ERC2-IT1O76042 136 aa11.13□□□□□ -0.63
PTCH1-201ENST00000331920 IGLV5-48A0A075B6I7 105 aa11.13□□□□□ -0.63
PTCH1-201ENST00000331920 SMCPP49901 116 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-201ENST00000331920 A0A1B0GW54 56 aa11.11□□□□□ -0.63
PTCH1-201ENST00000331920 PRO3102Q9H379 93 aa11.11□□□□□ -0.63
PTCH1-201ENST00000331920 LINC00304Q8N9R0 145 aa11.11□□□□□ -0.63
PTCH1-201ENST00000331920 ABCA12Q86UK0 2595 aa11.11□□□□□ -0.63
PTCH1-201ENST00000331920 WIPF1O43516 503 aa11.09□□□□□ -0.63
PTCH1-201ENST00000331920 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
PTCH1-201ENST00000331920 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-201ENST00000331920 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
PTCH1-201ENST00000331920 KTN1-AS1Q86SY8 53 aa11.07□□□□□ -0.64
PTCH1-201ENST00000331920 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-201ENST00000331920 CR1P17927 2039 aa11.06□□□□□ -0.64
PTCH1-201ENST00000331920 Q8N1X5 172 aa11.06□□□□□ -0.64
PTCH1-201ENST00000331920 CD164Q04900 197 aa11.04□□□□□ -0.64
PTCH1-201ENST00000331920 LINC00483Q53H64 154 aa11.04□□□□□ -0.64
PTCH1-201ENST00000331920 LCA10Q71F78 164 aa11.03□□□□□ -0.64
PTCH1-201ENST00000331920 A0A0G2JQZ4 141 aa11.03□□□□□ -0.64
PTCH1-201ENST00000331920 A0A1W2PNN7 141 aa11.03□□□□□ -0.64
PTCH1-201ENST00000331920 COX8CQ7Z4L0 72 aa11.02□□□□□ -0.64
PTCH1-201ENST00000331920 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
PTCH1-201ENST00000331920 SETD2Q9BYW2 2564 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-201ENST00000331920 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
PTCH1-201ENST00000331920 CAMK2N1Q7Z7J9 78 aa11□□□□□ -0.65
PTCH1-201ENST00000331920 M0R2T5 61 aa10.99□□□□□ -0.65
PTCH1-201ENST00000331920 A0A1W2PPR1 153 aa10.98□□□□□ -0.65
PTCH1-201ENST00000331920 PRR15Q8IV56 129 aa10.98□□□□□ -0.65
PTCH1-201ENST00000331920 IGFL1Q6UW32 110 aa10.98□□□□□ -0.65
PTCH1-201ENST00000331920 GVQW2A0A096LPI5 108 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-201ENST00000331920 A0A1B0GVX0 72 aa10.97□□□□□ -0.65
PTCH1-201ENST00000331920 DNAH10OSP0CZ25 163 aa10.96□□□□□ -0.65
PTCH1-201ENST00000331920 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms