RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 Q6ZSN1 163 aa11.9□□□□□ -0.5
SMCHD1-201ENST00000320876 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
SMCHD1-201ENST00000320876 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
SMCHD1-201ENST00000320876 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
SMCHD1-201ENST00000320876 LOC110117498A0A087WWA1 95 aa11.87□□□□□ -0.51
SMCHD1-201ENST00000320876 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
SMCHD1-201ENST00000320876 ATP11AUNQ6ZP68 121 aa11.86□□□□□ -0.51
SMCHD1-201ENST00000320876 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
SMCHD1-201ENST00000320876 Q6ZRU5 148 aa11.84□□□□□ -0.51
SMCHD1-201ENST00000320876 SPINT4Q6UDR6 99 aa11.83□□□□□ -0.52
SMCHD1-201ENST00000320876 C11orf72Q8NBR9 251 aa11.83□□□□□ -0.52
SMCHD1-201ENST00000320876 FSHBP01225 129 aa11.82□□□□□ -0.52
SMCHD1-201ENST00000320876 TRAV22A0A0B4J277 110 aa11.82□□□□□ -0.52
SMCHD1-201ENST00000320876 Q6ZQT0 140 aa11.81□□□□□ -0.52
SMCHD1-201ENST00000320876 C22orf24Q9Y442 160 aa11.81□□□□□ -0.52
SMCHD1-201ENST00000320876 PLA2G2AP14555 144 aa11.81□□□□□ -0.52
SMCHD1-201ENST00000320876 SMCR5Q8TEV8 140 aa11.8□□□□□ -0.52
SMCHD1-201ENST00000320876 CENPFP49454 3210 aa11.79□□□□□ -0.52
SMCHD1-201ENST00000320876 CEP295Q9C0D2 2601 aa11.79□□□□□ -0.52
SMCHD1-201ENST00000320876 ELOF1P60002 83 aaKnown RBP11.78□□□□□ -0.52
SMCHD1-201ENST00000320876 PRO0461Q9UI25 63 aa11.78□□□□□ -0.52
SMCHD1-201ENST00000320876 USP24Q9UPU5 2620 aa11.78□□□□□ -0.52
SMCHD1-201ENST00000320876 C16orf95Q9H693 158 aa11.78□□□□□ -0.52
SMCHD1-201ENST00000320876 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
SMCHD1-201ENST00000320876 C1orf134Q5TEV5 83 aa11.77□□□□□ -0.52
SMCHD1-201ENST00000320876 FLG2Q5D862 2391 aaPredicted RBP11.77□□□□□ -0.52
SMCHD1-201ENST00000320876 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.52
SMCHD1-201ENST00000320876 BPTFQ12830 3046 aa11.77□□□□□ -0.53
SMCHD1-201ENST00000320876 IGLV5-45A0A087WSX0 123 aa11.76□□□□□ -0.53
SMCHD1-201ENST00000320876 MOBPQ13875 183 aa11.76□□□□□ -0.53
SMCHD1-201ENST00000320876 IGHV3OR16-9A0A0B4J2B5 98 aa11.76□□□□□ -0.53
SMCHD1-201ENST00000320876 AVPP01185 164 aa11.75□□□□□ -0.53
SMCHD1-201ENST00000320876 TM2D3Q9BRN9 247 aa11.74□□□□□ -0.53
SMCHD1-201ENST00000320876 FAM218AQ96MZ4 157 aa11.74□□□□□ -0.53
SMCHD1-201ENST00000320876 KIF25-AS1Q9Y6Z4 181 aa11.73□□□□□ -0.53
SMCHD1-201ENST00000320876 ERC2-IT1O76042 136 aa11.73□□□□□ -0.53
SMCHD1-201ENST00000320876 CR1P17927 2039 aa11.73□□□□□ -0.53
SMCHD1-201ENST00000320876 POLQO75417 2590 aa11.72□□□□□ -0.53
SMCHD1-201ENST00000320876 Q6ZRX8 168 aa11.72□□□□□ -0.53
SMCHD1-201ENST00000320876 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
SMCHD1-201ENST00000320876 Q8NBF4 154 aa11.72□□□□□ -0.53
SMCHD1-201ENST00000320876 LINC00313P59037 77 aa11.71□□□□□ -0.53
SMCHD1-201ENST00000320876 CYP4F30PQ9H0H9 118 aa11.71□□□□□ -0.53
SMCHD1-201ENST00000320876 IGLV8-61A0A075B6I0 122 aa11.69□□□□□ -0.54
SMCHD1-201ENST00000320876 SPACA4Q8TDM5 124 aa11.69□□□□□ -0.54
SMCHD1-201ENST00000320876 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
SMCHD1-201ENST00000320876 LINC00476Q8WZB0 136 aa11.68□□□□□ -0.54
SMCHD1-201ENST00000320876 FAM19A4Q96LR4 140 aa11.67□□□□□ -0.54
SMCHD1-201ENST00000320876 LOC101927531A0A1B0GV80 90 aa11.66□□□□□ -0.54
SMCHD1-201ENST00000320876 SSBP3-AS1Q7Z2R9 100 aa11.66□□□□□ -0.54
SMCHD1-201ENST00000320876 CDSNQ15517 529 aa11.65□□□□□ -0.54
SMCHD1-201ENST00000320876 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
SMCHD1-201ENST00000320876 FHL3Q13643 280 aa11.62□□□□□ -0.55
SMCHD1-201ENST00000320876 NHLRC4P0CG21 123 aaPredicted RBP11.61□□□□□ -0.55
SMCHD1-201ENST00000320876 SMR3AQ99954 134 aa11.61□□□□□ -0.55
SMCHD1-201ENST00000320876 UQCR11O14957 56 aa11.6□□□□□ -0.55
SMCHD1-201ENST00000320876 A8MWP4 228 aa11.6□□□□□ -0.55
SMCHD1-201ENST00000320876 COA5Q86WW8 74 aa11.6□□□□□ -0.55
SMCHD1-201ENST00000320876 COL4A2P08572 1712 aa11.59□□□□□ -0.55
SMCHD1-201ENST00000320876 LINC01600Q96MT4 127 aa11.59□□□□□ -0.55
SMCHD1-201ENST00000320876 H3BNG1 76 aa11.58□□□□□ -0.56
SMCHD1-201ENST00000320876 LINC00315P59091 139 aa11.58□□□□□ -0.56
SMCHD1-201ENST00000320876 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
SMCHD1-201ENST00000320876 C16orf90A8MZG2 172 aa11.57□□□□□ -0.56
SMCHD1-201ENST00000320876 CD164Q04900 197 aa11.55□□□□□ -0.56
SMCHD1-201ENST00000320876 IGLV6-57P01721 117 aa11.55□□□□□ -0.56
SMCHD1-201ENST00000320876 CRIPTQ9P021 101 aa11.55□□□□□ -0.56
SMCHD1-201ENST00000320876 FAM229AH3BQW9 127 aa11.55□□□□□ -0.56
SMCHD1-201ENST00000320876 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
SMCHD1-201ENST00000320876 MDFIQ99750 246 aa11.52□□□□□ -0.57
SMCHD1-201ENST00000320876 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.57
SMCHD1-201ENST00000320876 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
SMCHD1-201ENST00000320876 KTN1-AS1Q86SY8 53 aa11.51□□□□□ -0.57
SMCHD1-201ENST00000320876 K7EQZ3 153 aa11.51□□□□□ -0.57
SMCHD1-201ENST00000320876 FASNP49327 2511 aaKnown RBP11.5□□□□□ -0.57
SMCHD1-201ENST00000320876 MIR22HGQ0VDD5 57 aa11.49□□□□□ -0.57
SMCHD1-201ENST00000320876 A8MUN3 132 aa11.49□□□□□ -0.57
SMCHD1-201ENST00000320876 Q6ZRP5 223 aa11.49□□□□□ -0.57
SMCHD1-201ENST00000320876 TYMSOSQ8TAI1 123 aa11.49□□□□□ -0.57
SMCHD1-201ENST00000320876 Q96NJ1 140 aa11.48□□□□□ -0.57
SMCHD1-201ENST00000320876 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
SMCHD1-201ENST00000320876 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
SMCHD1-201ENST00000320876 ST20-AS1Q8NBB2 130 aa11.45□□□□□ -0.58
SMCHD1-201ENST00000320876 LITAFQ99732 161 aa11.44□□□□□ -0.58
SMCHD1-201ENST00000320876 EP400Q96L91 3159 aa11.44□□□□□ -0.58
SMCHD1-201ENST00000320876 MRPL34Q9BQ48 92 aaKnown RBP11.44□□□□□ -0.58
SMCHD1-201ENST00000320876 KRTAP10-9P60411 292 aa11.44□□□□□ -0.58
SMCHD1-201ENST00000320876 RTL8CO15255 209 aa11.41□□□□□ -0.58
SMCHD1-201ENST00000320876 A0A1W2PPR1 153 aa11.41□□□□□ -0.58
SMCHD1-201ENST00000320876 C10orf142B7Z368 130 aa11.39□□□□□ -0.59
SMCHD1-201ENST00000320876 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
SMCHD1-201ENST00000320876 LINC00336Q6ZUF6 198 aa11.37□□□□□ -0.59
SMCHD1-201ENST00000320876 PRR15Q8IV56 129 aa11.37□□□□□ -0.59
SMCHD1-201ENST00000320876 LCA10Q71F78 164 aa11.36□□□□□ -0.59
SMCHD1-201ENST00000320876 H7BZZ5 65 aa11.34□□□□□ -0.59
SMCHD1-201ENST00000320876 KCNQ1DNQ9H478 68 aa11.34□□□□□ -0.59
SMCHD1-201ENST00000320876 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
SMCHD1-201ENST00000320876 DNAH10OSP0CZ25 163 aa11.33□□□□□ -0.6
SMCHD1-201ENST00000320876 PRO3102Q9H379 93 aa11.33□□□□□ -0.6
SMCHD1-201ENST00000320876 NBDYA0A0U1RRE5 68 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms