RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 BPTFQ12830 3046 aa13.28□□□□□ -0.28
TSR1-201ENST00000301364 PRR15LQ9BU68 103 aa13.27□□□□□ -0.29
TSR1-201ENST00000301364 ACANP16112 2415 aa13.27□□□□□ -0.29
TSR1-201ENST00000301364 NUPR2A6NF83 97 aa13.27□□□□□ -0.29
TSR1-201ENST00000301364 A6NED7 52 aa13.26□□□□□ -0.29
TSR1-201ENST00000301364 C22orf24Q9Y442 160 aa13.26□□□□□ -0.29
TSR1-201ENST00000301364 SVIPQ8NHG7 77 aa13.25□□□□□ -0.29
TSR1-201ENST00000301364 LOC110117498A0A087WWA1 95 aa13.25□□□□□ -0.29
TSR1-201ENST00000301364 A0A1B0GW54 56 aa13.24□□□□□ -0.29
TSR1-201ENST00000301364 ELOF1P60002 83 aaKnown RBP13.24□□□□□ -0.29
TSR1-201ENST00000301364 Q6ZQT0 140 aa13.24□□□□□ -0.29
TSR1-201ENST00000301364 KIAA0087Q14695 138 aa13.23□□□□□ -0.29
TSR1-201ENST00000301364 ESRGQ1W209 222 aa13.23□□□□□ -0.29
TSR1-201ENST00000301364 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
TSR1-201ENST00000301364 RPS28P62857 69 aaKnown RBP13.21□□□□□ -0.3
TSR1-201ENST00000301364 C1orf195Q5TG92 126 aa13.18□□□□□ -0.3
TSR1-201ENST00000301364 GVQW2A0A096LPI5 108 aaPredicted RBP13.18□□□□□ -0.3
TSR1-201ENST00000301364 PRLHP81277 87 aa13.17□□□□□ -0.3
TSR1-201ENST00000301364 SMCR5Q8TEV8 140 aa13.17□□□□□ -0.3
TSR1-201ENST00000301364 LINC00167Q96N53 147 aa13.17□□□□□ -0.3
TSR1-201ENST00000301364 Q8NAQ8 132 aa13.16□□□□□ -0.3
TSR1-201ENST00000301364 H0Y9P7 68 aa13.15□□□□□ -0.3
TSR1-201ENST00000301364 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
TSR1-201ENST00000301364 hDV103S1A0JD37 113 aa13.14□□□□□ -0.31
TSR1-201ENST00000301364 DEFB116Q30KQ4 102 aa13.14□□□□□ -0.31
TSR1-201ENST00000301364 CSNK1G2-AS1Q8NCQ2 148 aa13.14□□□□□ -0.31
TSR1-201ENST00000301364 LY6G6CO95867 125 aa13.13□□□□□ -0.31
TSR1-201ENST00000301364 IGHV6-1A0A0B4J1U7 121 aa13.13□□□□□ -0.31
TSR1-201ENST00000301364 SMIM29Q86T20 159 aa13.11□□□□□ -0.31
TSR1-201ENST00000301364 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
TSR1-201ENST00000301364 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
TSR1-201ENST00000301364 IGLV6-57P01721 117 aa13.11□□□□□ -0.31
TSR1-201ENST00000301364 A0A096LNT2 108 aa13.1□□□□□ -0.31
TSR1-201ENST00000301364 C5orf42Q9H799 3197 aa13.1□□□□□ -0.31
TSR1-201ENST00000301364 Q6ZRX8 168 aa13.09□□□□□ -0.31
TSR1-201ENST00000301364 Q8NBF4 154 aa13.09□□□□□ -0.31
TSR1-201ENST00000301364 HTTP42858 3142 aa13.08□□□□□ -0.32
TSR1-201ENST00000301364 CIRBP-AS1Q8TBR5 109 aa13.08□□□□□ -0.32
TSR1-201ENST00000301364 EPG5Q9HCE0 2579 aa13.07□□□□□ -0.32
TSR1-201ENST00000301364 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
TSR1-201ENST00000301364 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
TSR1-201ENST00000301364 K7ERS5 55 aa13.05□□□□□ -0.32
TSR1-201ENST00000301364 VPREB1P12018 145 aa13.05□□□□□ -0.32
TSR1-201ENST00000301364 PCOTHQ58A44 107 aa13.05□□□□□ -0.32
TSR1-201ENST00000301364 PSPHP1O15172 72 aa13.03□□□□□ -0.32
TSR1-201ENST00000301364 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.32
TSR1-201ENST00000301364 C1orf64Q8NEQ6 169 aa13.02□□□□□ -0.32
TSR1-201ENST00000301364 PMAIP1Q13794 54 aa13.01□□□□□ -0.33
TSR1-201ENST00000301364 C19orf73Q9NVV2 129 aa13□□□□□ -0.33
TSR1-201ENST00000301364 NHLRC4P0CG21 123 aaPredicted RBP13□□□□□ -0.33
TSR1-201ENST00000301364 Q6ZRP5 223 aa12.99□□□□□ -0.33
TSR1-201ENST00000301364 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
TSR1-201ENST00000301364 LINC00612Q8N6U2 182 aa12.98□□□□□ -0.33
TSR1-201ENST00000301364 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
TSR1-201ENST00000301364 PRO0628Q9UI54 55 aa12.98□□□□□ -0.33
TSR1-201ENST00000301364 PRR34Q9NV39 138 aa12.97□□□□□ -0.33
TSR1-201ENST00000301364 C1orf134Q5TEV5 83 aa12.96□□□□□ -0.33
TSR1-201ENST00000301364 TP53AIP1Q9HCN2 124 aa12.96□□□□□ -0.33
TSR1-201ENST00000301364 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
TSR1-201ENST00000301364 H3BPC8 53 aa12.94□□□□□ -0.34
TSR1-201ENST00000301364 LINC00588Q9Y4M8 146 aa12.94□□□□□ -0.34
TSR1-201ENST00000301364 LIMD2Q9BT23 127 aa12.93□□□□□ -0.34
TSR1-201ENST00000301364 C16orf90A8MZG2 172 aa12.93□□□□□ -0.34
TSR1-201ENST00000301364 ST20-AS1Q8NBB2 130 aa12.93□□□□□ -0.34
TSR1-201ENST00000301364 TRBV7-4A0A0J9YYF1 115 aa12.92□□□□□ -0.34
TSR1-201ENST00000301364 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
TSR1-201ENST00000301364 KCNQ1DNQ9H478 68 aa12.92□□□□□ -0.34
TSR1-201ENST00000301364 ERC2-IT1O76042 136 aa12.91□□□□□ -0.34
TSR1-201ENST00000301364 C4orf26Q17RF5 130 aa12.91□□□□□ -0.34
TSR1-201ENST00000301364 LINC01600Q96MT4 127 aa12.9□□□□□ -0.35
TSR1-201ENST00000301364 KRTAP24-1Q3LI83 254 aa12.89□□□□□ -0.35
TSR1-201ENST00000301364 MDFIQ99750 246 aa12.89□□□□□ -0.35
TSR1-201ENST00000301364 TRANK1O15050 2925 aa12.88□□□□□ -0.35
TSR1-201ENST00000301364 A0A0C4DFX4 3053 aa12.87□□□□□ -0.35
TSR1-201ENST00000301364 EPM2AB3EWF7 344 aa12.86□□□□□ -0.35
TSR1-201ENST00000301364 PHF5AQ7RTV0 110 aaKnown RBP12.86□□□□□ -0.35
TSR1-201ENST00000301364 IGLV1-50A0A075B6I6 118 aa12.84□□□□□ -0.35
TSR1-201ENST00000301364 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
TSR1-201ENST00000301364 SERTAD4-AS1Q5TG53 156 aa12.84□□□□□ -0.35
TSR1-201ENST00000301364 MOBPQ13875 183 aa12.83□□□□□ -0.36
TSR1-201ENST00000301364 KLKP1Q107X0 134 aa12.82□□□□□ -0.36
TSR1-201ENST00000301364 TRAV22A0A0B4J277 110 aa12.81□□□□□ -0.36
TSR1-201ENST00000301364 C15orf56Q8N910 161 aa12.81□□□□□ -0.36
TSR1-201ENST00000301364 RETNLBQ9BQ08 111 aa12.8□□□□□ -0.36
TSR1-201ENST00000301364 F8P00451 2351 aa12.79□□□□□ -0.36
TSR1-201ENST00000301364 FAM168BA1KXE4 195 aa12.79□□□□□ -0.36
TSR1-201ENST00000301364 NBDYA0A0U1RRE5 68 aa12.78□□□□□ -0.36
TSR1-201ENST00000301364 C9orf129Q5T035 196 aaKnown RBP12.77□□□□□ -0.37
TSR1-201ENST00000301364 K7EQZ3 153 aa12.76□□□□□ -0.37
TSR1-201ENST00000301364 KRTAP10-3P60369 221 aa12.75□□□□□ -0.37
TSR1-201ENST00000301364 FAM104AQ969W3 186 aa12.74□□□□□ -0.37
TSR1-201ENST00000301364 Q8N377 158 aa12.74□□□□□ -0.37
TSR1-201ENST00000301364 A8MWP4 228 aa12.74□□□□□ -0.37
TSR1-201ENST00000301364 RPL37AP61513 92 aaKnown RBP12.74□□□□□ -0.37
TSR1-201ENST00000301364 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
TSR1-201ENST00000301364 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
TSR1-201ENST00000301364 PLA2G2DQ9UNK4 145 aa12.73□□□□□ -0.37
TSR1-201ENST00000301364 CHTF8P0CG12 524 aa12.72□□□□□ -0.37
TSR1-201ENST00000301364 KRTAP1-3Q8IUG1 177 aa12.72□□□□□ -0.37
TSR1-201ENST00000301364 ACYP2P14621 99 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms