RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 IGHV3OR16-9A0A0B4J2B5 98 aa8.06□□□□□ -1.12
SNIP1-201ENST00000296215 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
SNIP1-201ENST00000296215 LRP4O75096 1905 aa8.05□□□□□ -1.12
SNIP1-201ENST00000296215 ODF3BA8MYP8 253 aa8.05□□□□□ -1.12
SNIP1-201ENST00000296215 K7EQZ3 153 aa8.04□□□□□ -1.12
SNIP1-201ENST00000296215 ZFP36P26651 326 aaKnown RBP8.04□□□□□ -1.12
SNIP1-201ENST00000296215 Q9BRP9 147 aa8.04□□□□□ -1.12
SNIP1-201ENST00000296215 LAMA3Q16787 3333 aa8.03□□□□□ -1.12
SNIP1-201ENST00000296215 A6NN06 94 aa8.03□□□□□ -1.12
SNIP1-201ENST00000296215 ACYP2P14621 99 aa8.03□□□□□ -1.12
SNIP1-201ENST00000296215 SLURP1P55000 103 aa8.03□□□□□ -1.12
SNIP1-201ENST00000296215 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
SNIP1-201ENST00000296215 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
SNIP1-201ENST00000296215 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
SNIP1-201ENST00000296215 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
SNIP1-201ENST00000296215 PLA2G2AP14555 144 aa8.02□□□□□ -1.13
SNIP1-201ENST00000296215 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
SNIP1-201ENST00000296215 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
SNIP1-201ENST00000296215 SSBP3-AS1Q7Z2R9 100 aa8.01□□□□□ -1.13
SNIP1-201ENST00000296215 MAP6D1Q9H9H5 199 aa8.01□□□□□ -1.13
SNIP1-201ENST00000296215 C22orf24Q9Y442 160 aa8.01□□□□□ -1.13
SNIP1-201ENST00000296215 ABCA12Q86UK0 2595 aa8□□□□□ -1.13
SNIP1-201ENST00000296215 Q8NBF4 154 aa8□□□□□ -1.13
SNIP1-201ENST00000296215 B4DSR2 109 aa7.99□□□□□ -1.13
SNIP1-201ENST00000296215 BPTFQ12830 3046 aa7.99□□□□□ -1.13
SNIP1-201ENST00000296215 LY6G6EA0A0G2JKS1 128 aa7.99□□□□□ -1.13
SNIP1-201ENST00000296215 U3KQA8 63 aa7.99□□□□□ -1.13
SNIP1-201ENST00000296215 C6orf48Q9UBA6 75 aa7.98□□□□□ -1.13
SNIP1-201ENST00000296215 IGLV8-61A0A075B6I0 122 aa7.98□□□□□ -1.13
SNIP1-201ENST00000296215 DOPEY1Q5JWR5 2465 aa7.98□□□□□ -1.13
SNIP1-201ENST00000296215 IGHV6-1A0A0B4J1U7 121 aa7.98□□□□□ -1.13
SNIP1-201ENST00000296215 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
SNIP1-201ENST00000296215 A8MU10 97 aa7.97□□□□□ -1.13
SNIP1-201ENST00000296215 TP53AIP1Q9HCN2 124 aa7.97□□□□□ -1.13
SNIP1-201ENST00000296215 ABCA2Q9BZC7 2435 aa7.97□□□□□ -1.13
SNIP1-201ENST00000296215 COL4A6Q14031 1691 aa7.97□□□□□ -1.13
SNIP1-201ENST00000296215 FLNBO75369 2602 aaKnown RBP7.96□□□□□ -1.14
SNIP1-201ENST00000296215 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
SNIP1-201ENST00000296215 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
SNIP1-201ENST00000296215 UBE2DNLQ8IWF7 75 aa7.94□□□□□ -1.14
SNIP1-201ENST00000296215 SPINK7P58062 85 aa7.94□□□□□ -1.14
SNIP1-201ENST00000296215 ZNF575Q86XF7 245 aa7.94□□□□□ -1.14
SNIP1-201ENST00000296215 LAMA2P24043 3122 aaKnown RBP7.94□□□□□ -1.14
SNIP1-201ENST00000296215 DEFB113Q30KQ7 82 aa7.93□□□□□ -1.14
SNIP1-201ENST00000296215 A6NDX4 124 aa7.93□□□□□ -1.14
SNIP1-201ENST00000296215 Q8NAQ8 132 aa7.92□□□□□ -1.14
SNIP1-201ENST00000296215 ZFYVE26Q68DK2 2539 aa7.92□□□□□ -1.14
SNIP1-201ENST00000296215 MTORP42345 2549 aa7.91□□□□□ -1.14
SNIP1-201ENST00000296215 EGFEM1PQ0D2K5 195 aa7.91□□□□□ -1.14
SNIP1-201ENST00000296215 SPINK1P00995 79 aa7.91□□□□□ -1.14
SNIP1-201ENST00000296215 ANKHD1Q8IWZ3 2542 aaKnown RBP7.9□□□□□ -1.15
SNIP1-201ENST00000296215 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.15
SNIP1-201ENST00000296215 KCNQ1DNQ9H478 68 aa7.89□□□□□ -1.15
SNIP1-201ENST00000296215 BRCA2P51587 3418 aa7.89□□□□□ -1.15
SNIP1-201ENST00000296215 IGF2RP11717 2491 aa7.88□□□□□ -1.15
SNIP1-201ENST00000296215 NAV2Q8IVL1 2488 aa7.88□□□□□ -1.15
SNIP1-201ENST00000296215 A8MWP4 228 aa7.88□□□□□ -1.15
SNIP1-201ENST00000296215 IGLV6-57P01721 117 aa7.88□□□□□ -1.15
SNIP1-201ENST00000296215 MSMBP08118 114 aa7.88□□□□□ -1.15
SNIP1-201ENST00000296215 KRTAP16-1A8MUX0 517 aa7.87□□□□□ -1.15
SNIP1-201ENST00000296215 JMJD1CQ15652 2540 aa7.87□□□□□ -1.15
SNIP1-201ENST00000296215 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
SNIP1-201ENST00000296215 SPINK6Q6UWN8 80 aa7.86□□□□□ -1.15
SNIP1-201ENST00000296215 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
SNIP1-201ENST00000296215 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
SNIP1-201ENST00000296215 C10orf142B7Z368 130 aa7.85□□□□□ -1.15
SNIP1-201ENST00000296215 EPG5Q9HCE0 2579 aa7.84□□□□□ -1.15
SNIP1-201ENST00000296215 WDR87Q6ZQQ6 2873 aa7.84□□□□□ -1.15
SNIP1-201ENST00000296215 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
SNIP1-201ENST00000296215 DEFB4AO15263 64 aa7.83□□□□□ -1.16
SNIP1-201ENST00000296215 IGLV1-51P01701 117 aa7.83□□□□□ -1.16
SNIP1-201ENST00000296215 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
SNIP1-201ENST00000296215 A0A096LNT2 108 aa7.82□□□□□ -1.16
SNIP1-201ENST00000296215 IGKV2-24A0A0C4DH68 120 aa7.82□□□□□ -1.16
SNIP1-201ENST00000296215 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
SNIP1-201ENST00000296215 Q8NA96 180 aa7.82□□□□□ -1.16
SNIP1-201ENST00000296215 ADM2Q7Z4H4 148 aa7.81□□□□□ -1.16
SNIP1-201ENST00000296215 ANKRD17O75179 2603 aaKnown RBP7.81□□□□□ -1.16
SNIP1-201ENST00000296215 INAFM1C9JVW0 142 aa7.81□□□□□ -1.16
SNIP1-201ENST00000296215 ODF3L2Q3SX64 289 aa7.8□□□□□ -1.16
SNIP1-201ENST00000296215 MYO9AB2RTY4 2548 aa7.79□□□□□ -1.16
SNIP1-201ENST00000296215 C7orf33Q8WU49 177 aa7.79□□□□□ -1.16
SNIP1-201ENST00000296215 HIVEP3Q5T1R4 2406 aa7.78□□□□□ -1.16
SNIP1-201ENST00000296215 DNAH12Q6ZR08 3092 aa7.78□□□□□ -1.16
SNIP1-201ENST00000296215 C10orf99Q6UWK7 81 aa7.78□□□□□ -1.16
SNIP1-201ENST00000296215 SPTBN4Q9H254 2564 aa7.78□□□□□ -1.16
SNIP1-201ENST00000296215 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
SNIP1-201ENST00000296215 MAPK1IP1LQ8NDC0 245 aa7.78□□□□□ -1.16
SNIP1-201ENST00000296215 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.16
SNIP1-201ENST00000296215 IGLV1-40P01703 118 aa7.77□□□□□ -1.17
SNIP1-201ENST00000296215 FN1P02751 2386 aaKnown RBP7.77□□□□□ -1.17
SNIP1-201ENST00000296215 MKI67P46013 3256 aaKnown RBP7.77□□□□□ -1.17
SNIP1-201ENST00000296215 LELP1Q5T871 98 aa7.76□□□□□ -1.17
SNIP1-201ENST00000296215 PRLHP81277 87 aa7.75□□□□□ -1.17
SNIP1-201ENST00000296215 A0A1W2PNM2 257 aa7.75□□□□□ -1.17
SNIP1-201ENST00000296215 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
SNIP1-201ENST00000296215 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
SNIP1-201ENST00000296215 DSCR10P59022 87 aa7.74□□□□□ -1.17
SNIP1-201ENST00000296215 Q8N377 158 aa7.73□□□□□ -1.17
SNIP1-201ENST00000296215 FBXL19-AS1Q494R0 122 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms