RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TGP01266 2768 aa11.96□□□□□ -0.49
CAPN1-201ENST00000279247 SLPIP03973 132 aa11.96□□□□□ -0.5
CAPN1-201ENST00000279247 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.5
CAPN1-201ENST00000279247 CSMD3Q7Z407 3707 aa11.96□□□□□ -0.5
CAPN1-201ENST00000279247 LECT2O14960 151 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 GAGE2EQ4V326 116 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 S100A7L2Q5SY68 101 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 GAGE2DQ9UEU5 116 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 KRTAP26-1Q6PEX3 210 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 Q6ZRU5 148 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
CAPN1-201ENST00000279247 DNAL4O96015 105 aa11.94□□□□□ -0.5
CAPN1-201ENST00000279247 BAALC-AS2P0C853 105 aa11.94□□□□□ -0.5
CAPN1-201ENST00000279247 H3BT86 120 aa11.93□□□□□ -0.5
CAPN1-201ENST00000279247 CASC10Q5T4H9 136 aa11.93□□□□□ -0.5
CAPN1-201ENST00000279247 C15orf53Q8NAA6 179 aa11.92□□□□□ -0.5
CAPN1-201ENST00000279247 PPDPFQ9H3Y8 114 aa11.92□□□□□ -0.5
CAPN1-201ENST00000279247 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
CAPN1-201ENST00000279247 C6orf99Q4VX62 202 aa11.89□□□□□ -0.51
CAPN1-201ENST00000279247 SIGMAR1Q99720 223 aa11.89□□□□□ -0.51
CAPN1-201ENST00000279247 TRACP01848 142 aa11.89□□□□□ -0.51
CAPN1-201ENST00000279247 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
CAPN1-201ENST00000279247 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
CAPN1-201ENST00000279247 NDUFC2O95298 119 aa11.86□□□□□ -0.51
CAPN1-201ENST00000279247 H0YGX0 51 aa11.86□□□□□ -0.51
CAPN1-201ENST00000279247 M0QXV9 152 aa11.86□□□□□ -0.51
CAPN1-201ENST00000279247 FBN3Q75N90 2809 aa11.85□□□□□ -0.51
CAPN1-201ENST00000279247 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
CAPN1-201ENST00000279247 XGP55808 180 aa11.85□□□□□ -0.51
CAPN1-201ENST00000279247 DNAH7Q8WXX0 4024 aa11.84□□□□□ -0.51
CAPN1-201ENST00000279247 SYCNQ0VAF6 134 aa11.84□□□□□ -0.51
CAPN1-201ENST00000279247 TRBV10-3A0A0K0K1G6 114 aa11.84□□□□□ -0.51
CAPN1-201ENST00000279247 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
CAPN1-201ENST00000279247 UBE2DNLQ8IWF7 75 aa11.83□□□□□ -0.52
CAPN1-201ENST00000279247 GVQW2A0A096LPI5 108 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-201ENST00000279247 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
CAPN1-201ENST00000279247 Q6ZRP5 223 aa11.83□□□□□ -0.52
CAPN1-201ENST00000279247 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
CAPN1-201ENST00000279247 C22orf24Q9Y442 160 aa11.81□□□□□ -0.52
CAPN1-201ENST00000279247 NDUFC2-KCTD14E9PQ53 114 aa11.8□□□□□ -0.52
CAPN1-201ENST00000279247 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
CAPN1-201ENST00000279247 C2orf48Q96LS8 159 aa11.78□□□□□ -0.52
CAPN1-201ENST00000279247 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
CAPN1-201ENST00000279247 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
CAPN1-201ENST00000279247 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
CAPN1-201ENST00000279247 TTC32Q5I0X7 151 aa11.76□□□□□ -0.53
CAPN1-201ENST00000279247 Q8N814 137 aa11.76□□□□□ -0.53
CAPN1-201ENST00000279247 GAGE2AQ6NT46 116 aa11.76□□□□□ -0.53
CAPN1-201ENST00000279247 ORMDL1Q9P0S3 153 aa11.76□□□□□ -0.53
CAPN1-201ENST00000279247 STARD9Q9P2P6 4700 aa11.75□□□□□ -0.53
CAPN1-201ENST00000279247 TRAV23DV6A0A075B6W5 121 aa11.75□□□□□ -0.53
CAPN1-201ENST00000279247 IGLV6-57P01721 117 aa11.75□□□□□ -0.53
CAPN1-201ENST00000279247 VPREB1P12018 145 aa11.75□□□□□ -0.53
CAPN1-201ENST00000279247 GAGE2BQ13066 116 aa11.75□□□□□ -0.53
CAPN1-201ENST00000279247 DNAH10Q8IVF4 4471 aa11.74□□□□□ -0.53
CAPN1-201ENST00000279247 PSCAO43653 123 aa11.73□□□□□ -0.53
CAPN1-201ENST00000279247 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
CAPN1-201ENST00000279247 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
CAPN1-201ENST00000279247 SERTAD4-AS1Q5TG53 156 aa11.71□□□□□ -0.53
CAPN1-201ENST00000279247 RMI2Q96E14 147 aa11.71□□□□□ -0.53
CAPN1-201ENST00000279247 ZNF73O43830 326 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-201ENST00000279247 DIRC1Q969H9 104 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 APLNQ9ULZ1 77 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-201ENST00000279247 LINC00575Q6W349 94 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 NKAPP1Q8N9T2 125 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 hADV29S1A0JD25 119 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 SNCGO76070 127 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
CAPN1-201ENST00000279247 RPL37AP8A6NKH3 93 aa11.69□□□□□ -0.54
CAPN1-201ENST00000279247 Q6ZQY7 126 aa11.69□□□□□ -0.54
CAPN1-201ENST00000279247 M0R378 163 aa11.68□□□□□ -0.54
CAPN1-201ENST00000279247 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
CAPN1-201ENST00000279247 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
CAPN1-201ENST00000279247 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
CAPN1-201ENST00000279247 M0R2N4 97 aa11.66□□□□□ -0.54
CAPN1-201ENST00000279247 FAM19A5Q7Z5A7 132 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-201ENST00000279247 COX7BP24311 80 aa11.65□□□□□ -0.55
CAPN1-201ENST00000279247 LAMTOR3Q9UHA4 124 aa11.65□□□□□ -0.55
CAPN1-201ENST00000279247 C7orf33Q8WU49 177 aa11.63□□□□□ -0.55
CAPN1-201ENST00000279247 SMCR5Q8TEV8 140 aa11.63□□□□□ -0.55
CAPN1-201ENST00000279247 TMEM256-PLSCR3K7ERE1 68 aa11.62□□□□□ -0.55
CAPN1-201ENST00000279247 A0A1B0GX51 115 aa11.6□□□□□ -0.55
CAPN1-201ENST00000279247 FAM240AA0A1B0GVK7 77 aa11.6□□□□□ -0.55
CAPN1-201ENST00000279247 LINC00167Q96N53 147 aa11.6□□□□□ -0.55
CAPN1-201ENST00000279247 NHLRC4P0CG21 123 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-201ENST00000279247 DYNC2H1Q8NCM8 4307 aaKnown RBP11.58□□□□□ -0.56
CAPN1-201ENST00000279247 F8WDY8 70 aa11.58□□□□□ -0.56
CAPN1-201ENST00000279247 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
CAPN1-201ENST00000279247 KMT2AQ03164 3969 aa11.58□□□□□ -0.56
CAPN1-201ENST00000279247 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
CAPN1-201ENST00000279247 DEFB105AQ8NG35 78 aa11.57□□□□□ -0.56
CAPN1-201ENST00000279247 KRTAP21-3Q3LHN1 58 aa11.56□□□□□ -0.56
CAPN1-201ENST00000279247 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
CAPN1-201ENST00000279247 LOC107984640A0A0U1RRK4 108 aa11.55□□□□□ -0.56
CAPN1-201ENST00000279247 ACYP1P07311 99 aa11.55□□□□□ -0.56
CAPN1-201ENST00000279247 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
CAPN1-201ENST00000279247 TLX1NBP0CAT3 122 aa11.54□□□□□ -0.56
CAPN1-201ENST00000279247 OBSCN-AS1Q96MR7 158 aa11.54□□□□□ -0.56
CAPN1-201ENST00000279247 A0A096LNI7 61 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 271.1 ms