RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
COPS3-201ENST00000268717 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
COPS3-201ENST00000268717 COX6CP09669 75 aa10.12□□□□□ -0.79
COPS3-201ENST00000268717 H7C2G1 150 aa10.11□□□□□ -0.79
COPS3-201ENST00000268717 RNF151Q2KHN1 245 aa10.11□□□□□ -0.79
COPS3-201ENST00000268717 TRIAP1O43715 76 aa10.11□□□□□ -0.79
COPS3-201ENST00000268717 SCGB1C2P0DMR2 95 aa10.11□□□□□ -0.79
COPS3-201ENST00000268717 Q6ZRU5 148 aa10.11□□□□□ -0.79
COPS3-201ENST00000268717 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
COPS3-201ENST00000268717 SYCNQ0VAF6 134 aa10.1□□□□□ -0.79
COPS3-201ENST00000268717 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
COPS3-201ENST00000268717 USP17L23D6RBM5 183 aa10.09□□□□□ -0.79
COPS3-201ENST00000268717 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
COPS3-201ENST00000268717 H3BMG7 143 aa10.08□□□□□ -0.8
COPS3-201ENST00000268717 TCL1BO95988 128 aa10.08□□□□□ -0.8
COPS3-201ENST00000268717 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
COPS3-201ENST00000268717 F8W1H4 67 aa10.07□□□□□ -0.8
COPS3-201ENST00000268717 RPL28P46779 137 aaKnown RBP10.07□□□□□ -0.8
COPS3-201ENST00000268717 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
COPS3-201ENST00000268717 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
COPS3-201ENST00000268717 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
COPS3-201ENST00000268717 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
COPS3-201ENST00000268717 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
COPS3-201ENST00000268717 BIRC6Q9NR09 4857 aa10.05□□□□□ -0.8
COPS3-201ENST00000268717 PRO0461Q9UI25 63 aa10.04□□□□□ -0.8
COPS3-201ENST00000268717 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
COPS3-201ENST00000268717 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
COPS3-201ENST00000268717 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
COPS3-201ENST00000268717 FAT2Q9NYQ8 4349 aa10.02□□□□□ -0.81
COPS3-201ENST00000268717 LST1O00453 97 aa10.02□□□□□ -0.81
COPS3-201ENST00000268717 HECTD4Q9Y4D8 3996 aa10.02□□□□□ -0.81
COPS3-201ENST00000268717 M0QXV9 152 aa10.01□□□□□ -0.81
COPS3-201ENST00000268717 PSCAO43653 123 aa10.01□□□□□ -0.81
COPS3-201ENST00000268717 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
COPS3-201ENST00000268717 SLPIP03973 132 aa10□□□□□ -0.81
COPS3-201ENST00000268717 Q8NDZ9 215 aa10□□□□□ -0.81
COPS3-201ENST00000268717 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
COPS3-201ENST00000268717 CNBPP62633 177 aaKnown RBP10□□□□□ -0.81
COPS3-201ENST00000268717 LINC01620Q4KN68 170 aa10□□□□□ -0.81
COPS3-201ENST00000268717 Q6ZRP5 223 aa10□□□□□ -0.81
COPS3-201ENST00000268717 LINC01600Q96MT4 127 aa10□□□□□ -0.81
COPS3-201ENST00000268717 H0YGX0 51 aa9.99□□□□□ -0.81
COPS3-201ENST00000268717 M0R2N4 97 aa9.99□□□□□ -0.81
COPS3-201ENST00000268717 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
COPS3-201ENST00000268717 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
COPS3-201ENST00000268717 Q6ZR54 194 aa9.98□□□□□ -0.81
COPS3-201ENST00000268717 TRACP01848 142 aa9.97□□□□□ -0.81
COPS3-201ENST00000268717 VPREB1P12018 145 aa9.97□□□□□ -0.81
COPS3-201ENST00000268717 CLEC2BQ92478 149 aa9.97□□□□□ -0.81
COPS3-201ENST00000268717 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
COPS3-201ENST00000268717 NCR3O14931 201 aa9.96□□□□□ -0.81
COPS3-201ENST00000268717 LECT2O14960 151 aa9.96□□□□□ -0.81
COPS3-201ENST00000268717 PRR3P79522 188 aaKnown RBP9.96□□□□□ -0.81
COPS3-201ENST00000268717 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.81
COPS3-201ENST00000268717 Q6ZRN7 208 aaPredicted RBP9.96□□□□□ -0.81
COPS3-201ENST00000268717 WFDC2Q14508 124 aa9.96□□□□□ -0.82
COPS3-201ENST00000268717 GAGE2EQ4V326 116 aa9.96□□□□□ -0.82
COPS3-201ENST00000268717 GAGE2DQ9UEU5 116 aa9.96□□□□□ -0.82
COPS3-201ENST00000268717 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
COPS3-201ENST00000268717 LOC107984640A0A0U1RRK4 108 aa9.95□□□□□ -0.82
COPS3-201ENST00000268717 SLC25A20O43772 301 aa9.95□□□□□ -0.82
COPS3-201ENST00000268717 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
COPS3-201ENST00000268717 C9JAW5 83 aa9.94□□□□□ -0.82
COPS3-201ENST00000268717 M0R378 163 aa9.94□□□□□ -0.82
COPS3-201ENST00000268717 RPL18AQ02543 176 aaKnown RBP9.94□□□□□ -0.82
COPS3-201ENST00000268717 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
COPS3-201ENST00000268717 A0A1B0GX51 115 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 LRCOL1A6NCL2 159 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 H3BT86 120 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 LINC00336Q6ZUF6 198 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 RTL8CO15255 209 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 MTURNQ8N3F0 131 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
COPS3-201ENST00000268717 PKHD1P08F94 4074 aa9.91□□□□□ -0.82
COPS3-201ENST00000268717 ANKRD29Q8N6D5 301 aa9.91□□□□□ -0.82
COPS3-201ENST00000268717 PKD1P98161 4303 aa9.91□□□□□ -0.82
COPS3-201ENST00000268717 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.82
COPS3-201ENST00000268717 FAM218AQ96MZ4 157 aa9.9□□□□□ -0.82
COPS3-201ENST00000268717 TRBV10-3A0A0K0K1G6 114 aa9.89□□□□□ -0.83
COPS3-201ENST00000268717 K7ERU9 68 aa9.89□□□□□ -0.83
COPS3-201ENST00000268717 ETDBQ3ZM63 59 aa9.89□□□□□ -0.83
COPS3-201ENST00000268717 C1orf134Q5TEV5 83 aa9.89□□□□□ -0.83
COPS3-201ENST00000268717 TEN1Q86WV5 123 aa9.89□□□□□ -0.83
COPS3-201ENST00000268717 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
COPS3-201ENST00000268717 TRBV7-6A0A0J9YX20 115 aa9.88□□□□□ -0.83
COPS3-201ENST00000268717 C6orf99Q4VX62 202 aa9.88□□□□□ -0.83
COPS3-201ENST00000268717 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
COPS3-201ENST00000268717 C16orf90A8MZG2 172 aa9.87□□□□□ -0.83
COPS3-201ENST00000268717 A0A087WYN8 130 aa9.86□□□□□ -0.83
COPS3-201ENST00000268717 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
COPS3-201ENST00000268717 DNAL4O96015 105 aa9.86□□□□□ -0.83
COPS3-201ENST00000268717 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
COPS3-201ENST00000268717 SNCGO76070 127 aa9.85□□□□□ -0.83
COPS3-201ENST00000268717 SERTAD4-AS1Q5TG53 156 aa9.85□□□□□ -0.83
COPS3-201ENST00000268717 C9orf163Q8N9P6 203 aa9.85□□□□□ -0.83
COPS3-201ENST00000268717 DIRC1Q969H9 104 aa9.85□□□□□ -0.83
COPS3-201ENST00000268717 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
COPS3-201ENST00000268717 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
COPS3-201ENST00000268717 Q8N814 137 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms