RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PRLHP81277 87 aa12.37□□□□□ -0.43
NOTCH3-201ENST00000263388 FSHBP01225 129 aa12.36□□□□□ -0.43
NOTCH3-201ENST00000263388 CR1P17927 2039 aa12.36□□□□□ -0.43
NOTCH3-201ENST00000263388 LINC00846Q9NV44 126 aa12.35□□□□□ -0.43
NOTCH3-201ENST00000263388 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
NOTCH3-201ENST00000263388 Q6ZSN1 163 aa12.34□□□□□ -0.43
NOTCH3-201ENST00000263388 RPS28P62857 69 aaKnown RBP12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 A0A1B0GW54 56 aa12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 COL4A2P08572 1712 aa12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 IGKV2-30P06310 120 aa12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 Q8N2B8 174 aa12.33□□□□□ -0.44
NOTCH3-201ENST00000263388 C6orf48Q9UBA6 75 aa12.31□□□□□ -0.44
NOTCH3-201ENST00000263388 A8MTW9 85 aa12.31□□□□□ -0.44
NOTCH3-201ENST00000263388 PCNTO95613 3336 aa12.31□□□□□ -0.44
NOTCH3-201ENST00000263388 DEFB116Q30KQ4 102 aa12.3□□□□□ -0.44
NOTCH3-201ENST00000263388 AKAP13Q12802 2813 aa12.3□□□□□ -0.44
NOTCH3-201ENST00000263388 SPINT4Q6UDR6 99 aa12.29□□□□□ -0.44
NOTCH3-201ENST00000263388 BCE1O60756 84 aa12.29□□□□□ -0.44
NOTCH3-201ENST00000263388 PLA2G1BP04054 148 aaKnown RBP12.27□□□□□ -0.44
NOTCH3-201ENST00000263388 C10orf142B7Z368 130 aa12.27□□□□□ -0.44
NOTCH3-201ENST00000263388 SMR3AQ99954 134 aa12.27□□□□□ -0.45
NOTCH3-201ENST00000263388 IGLV5-39A0A0G2JS06 123 aa12.27□□□□□ -0.45
NOTCH3-201ENST00000263388 H3BPC8 53 aa12.27□□□□□ -0.45
NOTCH3-201ENST00000263388 CDIP1Q9H305 208 aa12.27□□□□□ -0.45
NOTCH3-201ENST00000263388 SMIM29Q86T20 159 aa12.26□□□□□ -0.45
NOTCH3-201ENST00000263388 C5orf42Q9H799 3197 aa12.25□□□□□ -0.45
NOTCH3-201ENST00000263388 Q6ZRU5 148 aa12.25□□□□□ -0.45
NOTCH3-201ENST00000263388 ATP11AUNQ6ZP68 121 aa12.24□□□□□ -0.45
NOTCH3-201ENST00000263388 C1orf134Q5TEV5 83 aa12.24□□□□□ -0.45
NOTCH3-201ENST00000263388 UTRNP46939 3433 aa12.23□□□□□ -0.45
NOTCH3-201ENST00000263388 CEP350Q5VT06 3117 aa12.22□□□□□ -0.45
NOTCH3-201ENST00000263388 Q9UF83 564 aa12.22□□□□□ -0.45
NOTCH3-201ENST00000263388 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.46
NOTCH3-201ENST00000263388 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
NOTCH3-201ENST00000263388 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
NOTCH3-201ENST00000263388 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
NOTCH3-201ENST00000263388 C22orf24Q9Y442 160 aa12.2□□□□□ -0.46
NOTCH3-201ENST00000263388 C4orf26Q17RF5 130 aa12.19□□□□□ -0.46
NOTCH3-201ENST00000263388 KIAA0087Q14695 138 aa12.19□□□□□ -0.46
NOTCH3-201ENST00000263388 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
NOTCH3-201ENST00000263388 TRAV22A0A0B4J277 110 aa12.17□□□□□ -0.46
NOTCH3-201ENST00000263388 EPG5Q9HCE0 2579 aa12.17□□□□□ -0.46
NOTCH3-201ENST00000263388 FAM19A4Q96LR4 140 aa12.17□□□□□ -0.46
NOTCH3-201ENST00000263388 SMCR5Q8TEV8 140 aa12.16□□□□□ -0.46
NOTCH3-201ENST00000263388 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
NOTCH3-201ENST00000263388 FHL3Q13643 280 aa12.15□□□□□ -0.46
NOTCH3-201ENST00000263388 KRTAP10-9P60411 292 aa12.15□□□□□ -0.47
NOTCH3-201ENST00000263388 LOC110117498A0A087WWA1 95 aa12.12□□□□□ -0.47
NOTCH3-201ENST00000263388 A0A1W2PPR1 153 aa12.12□□□□□ -0.47
NOTCH3-201ENST00000263388 MOBPQ13875 183 aa12.1□□□□□ -0.47
NOTCH3-201ENST00000263388 ELOF1P60002 83 aaKnown RBP12.1□□□□□ -0.47
NOTCH3-201ENST00000263388 LINC00313P59037 77 aa12.1□□□□□ -0.47
NOTCH3-201ENST00000263388 H3BNG1 76 aa12.09□□□□□ -0.47
NOTCH3-201ENST00000263388 Q6ZQT0 140 aa12.08□□□□□ -0.48
NOTCH3-201ENST00000263388 SSBP3-AS1Q7Z2R9 100 aa12.07□□□□□ -0.48
NOTCH3-201ENST00000263388 LINC00167Q96N53 147 aa12.06□□□□□ -0.48
NOTCH3-201ENST00000263388 SPACA4Q8TDM5 124 aa12.06□□□□□ -0.48
NOTCH3-201ENST00000263388 LINC00315P59091 139 aa12.05□□□□□ -0.48
NOTCH3-201ENST00000263388 CYP4F30PQ9H0H9 118 aa12.05□□□□□ -0.48
NOTCH3-201ENST00000263388 Q6ZRX8 168 aa12.04□□□□□ -0.48
NOTCH3-201ENST00000263388 IGLV8-61A0A075B6I0 122 aa12.04□□□□□ -0.48
NOTCH3-201ENST00000263388 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
NOTCH3-201ENST00000263388 CENPEQ02224 2701 aa12.04□□□□□ -0.48
NOTCH3-201ENST00000263388 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
NOTCH3-201ENST00000263388 Q8NBF4 154 aa12.03□□□□□ -0.48
NOTCH3-201ENST00000263388 FAM218AQ96MZ4 157 aa12.02□□□□□ -0.48
NOTCH3-201ENST00000263388 CRIPTQ9P021 101 aa12.01□□□□□ -0.49
NOTCH3-201ENST00000263388 HECTD1Q9ULT8 2610 aa12.01□□□□□ -0.49
NOTCH3-201ENST00000263388 LOC101927531A0A1B0GV80 90 aa12.01□□□□□ -0.49
NOTCH3-201ENST00000263388 LINC00476Q8WZB0 136 aa12□□□□□ -0.49
NOTCH3-201ENST00000263388 FLNAP21333 2647 aaKnown RBP12□□□□□ -0.49
NOTCH3-201ENST00000263388 ERC2-IT1O76042 136 aa12□□□□□ -0.49
NOTCH3-201ENST00000263388 MDFIQ99750 246 aa11.99□□□□□ -0.49
NOTCH3-201ENST00000263388 C16orf90A8MZG2 172 aa11.98□□□□□ -0.49
NOTCH3-201ENST00000263388 UQCR11O14957 56 aa11.98□□□□□ -0.49
NOTCH3-201ENST00000263388 MGAM2Q2M2H8 2515 aa11.96□□□□□ -0.49
NOTCH3-201ENST00000263388 CFAP54Q96N23 3096 aa11.95□□□□□ -0.5
NOTCH3-201ENST00000263388 MAST4O15021 2626 aa11.95□□□□□ -0.5
NOTCH3-201ENST00000263388 TM2D3Q9BRN9 247 aa11.95□□□□□ -0.5
NOTCH3-201ENST00000263388 LINC01600Q96MT4 127 aa11.95□□□□□ -0.5
NOTCH3-201ENST00000263388 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
NOTCH3-201ENST00000263388 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
NOTCH3-201ENST00000263388 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
NOTCH3-201ENST00000263388 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
NOTCH3-201ENST00000263388 EPM2AB3EWF7 344 aa11.92□□□□□ -0.5
NOTCH3-201ENST00000263388 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
NOTCH3-201ENST00000263388 IGLV6-57P01721 117 aa11.91□□□□□ -0.5
NOTCH3-201ENST00000263388 ATRQ13535 2644 aa11.91□□□□□ -0.5
NOTCH3-201ENST00000263388 A8MWP4 228 aa11.9□□□□□ -0.5
NOTCH3-201ENST00000263388 FAM229AH3BQW9 127 aa11.9□□□□□ -0.5
NOTCH3-201ENST00000263388 Q6ZRP5 223 aa11.89□□□□□ -0.51
NOTCH3-201ENST00000263388 COA5Q86WW8 74 aa11.89□□□□□ -0.51
NOTCH3-201ENST00000263388 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
NOTCH3-201ENST00000263388 PHF5AQ7RTV0 110 aaKnown RBP11.87□□□□□ -0.51
NOTCH3-201ENST00000263388 CD164Q04900 197 aa11.86□□□□□ -0.51
NOTCH3-201ENST00000263388 FLNBO75369 2602 aaKnown RBP11.86□□□□□ -0.51
NOTCH3-201ENST00000263388 Q96NJ1 140 aa11.85□□□□□ -0.51
NOTCH3-201ENST00000263388 CHTF8P0CG12 524 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms